RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 POM121L2Q96KW2 1035 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 IMMP1LQ96LU5 166 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 TECTBQ96PL2 329 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 TAAR6Q96RI8 345 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 TRIB1Q96RU8 372 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 PRDM14Q9GZV8 571 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 CHRNA10Q9GZZ6 450 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 SMPXQ9UHP9 88 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 SLC45A2Q9UMX9 530 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 COX11Q9Y6N1 276 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 ADAMTS20P59510 1910 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 DYSFO75923 2080 aa4.47□□□□□ -1.69
ATG4A-204ENST00000372246 TNRC18O15417 2968 aaPredicted RBP4.46□□□□□ -1.69
ATG4A-204ENST00000372246 ANKRD30BLA7E2S9 258 aa4.46□□□□□ -1.69
ATG4A-204ENST00000372246 ZNF891A8MT65 544 aaPredicted RBP4.46□□□□□ -1.69
ATG4A-204ENST00000372246 PDE6DO43924 150 aa4.46□□□□□ -1.69
ATG4A-204ENST00000372246 ZNF324O75467 553 aaPredicted RBP4.46□□□□□ -1.69
ATG4A-204ENST00000372246 CER1O95813 267 aa4.46□□□□□ -1.69
ATG4A-204ENST00000372246 P0C879 139 aa4.46□□□□□ -1.69
ATG4A-204ENST00000372246 PF4V1P10720 104 aa4.46□□□□□ -1.69
ATG4A-204ENST00000372246 CA7P43166 264 aa4.46□□□□□ -1.69
ATG4A-204ENST00000372246 FOXF2Q12947 444 aa4.46□□□□□ -1.69
ATG4A-204ENST00000372246 UBE2V1Q13404 147 aa4.46□□□□□ -1.69
ATG4A-204ENST00000372246 RPEL1Q2QD12 228 aa4.46□□□□□ -1.69
ATG4A-204ENST00000372246 FBLN7Q53RD9 439 aa4.46□□□□□ -1.69
ATG4A-204ENST00000372246 FAM201AQ5SY85 155 aa4.46□□□□□ -1.69
ATG4A-204ENST00000372246 RNASEKQ6P5S7 137 aaKnown RBP4.46□□□□□ -1.69
ATG4A-204ENST00000372246 OR4C5Q8NGB2 326 aa4.46□□□□□ -1.69
ATG4A-204ENST00000372246 RNF2Q99496 336 aa4.46□□□□□ -1.69
ATG4A-204ENST00000372246 HSD17B10Q99714 261 aaKnown RBP4.46□□□□□ -1.69
ATG4A-204ENST00000372246 VPS25Q9BRG1 176 aa4.46□□□□□ -1.69
ATG4A-204ENST00000372246 KCNIP2Q9NS61 270 aa4.46□□□□□ -1.69
ATG4A-204ENST00000372246 ZNF355PQ9NSJ1 428 aa4.46□□□□□ -1.69
ATG4A-204ENST00000372246 WDR83OSQ9Y284 106 aa4.46□□□□□ -1.69
ATG4A-204ENST00000372246 IGHV3OR15-7A0A075B7D8 119 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 VWC2LB2RUY7 222 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 B9A039 149 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 AGFG2O95081 481 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 P04436 131 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 MPV17P39210 176 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 MAGEA5P43359 124 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 PPOXP50336 477 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 ZNF134P52741 427 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 RANP62826 216 aaKnown RBP4.46□□□□□ -1.7
ATG4A-204ENST00000372246 GNG3P63215 75 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 PAFAH1B2P68402 229 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 SSBP2P81877 361 aaPredicted RBP4.46□□□□□ -1.7
ATG4A-204ENST00000372246 ATP6V1FQ16864 119 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 SPRNQ5BIV9 151 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 PRAMEF5Q5TYX0 476 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 DUX4L9Q6RFH8 374 aaPredicted RBP4.46□□□□□ -1.7
ATG4A-204ENST00000372246 FAM214BQ7L5A3 538 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 TCF24Q7RTU0 167 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 MDP1Q86V88 176 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 ZNF645Q8N7E2 425 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 OR4B1Q8NGF8 309 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 OR2Y1Q8NGV0 311 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 ZNF503Q96F45 646 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 KCNS1Q96KK3 526 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 SFXN3Q9BWM7 321 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 UQCR10Q9UDW1 63 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 KLF13Q9Y2Y9 288 aaPredicted RBP4.46□□□□□ -1.7
ATG4A-204ENST00000372246 TIMM9Q9Y5J7 89 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 HCFC1P51610 2035 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 PLXNB1O43157 2135 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 CACNA1GO43497 2377 aa4.46□□□□□ -1.7
ATG4A-204ENST00000372246 MED13Q9UHV7 2174 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 IGKV1OR2-108A0A075B7D4 117 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 A0A087X0K7 114 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 IGHV2OR16-5A0A0B4J2B6 119 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 MUC21A0A0G2JKD1 596 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 MUC21A0A140T8X8 626 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 GGTLC3B5MD39 225 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 OR7C2O60412 319 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 TOX4O94842 621 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 HAND1O96004 215 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 STAG3L2P0CL84 134 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 CLDN18P56856 261 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 FXYD7P58549 80 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 PCBD1P61457 104 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 GNG5P63218 68 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 ADIPOQQ15848 244 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 MUC21Q5SSG8 566 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 AMMECR1LQ6DCA0 310 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 TRAT1Q6PIZ9 186 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 OR4F17Q8NGA8 305 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 ZNF596Q8TC21 504 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 SARAFQ96BY9 339 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 GALMQ96C23 342 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 OR8B2Q96RD0 313 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 CITED2Q99967 270 aaPredicted RBP4.45□□□□□ -1.7
ATG4A-204ENST00000372246 WASHC3Q9Y3C0 194 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 LOXL2Q9Y4K0 774 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 LSM4Q9Y4Z0 139 aaKnown RBP4.45□□□□□ -1.7
ATG4A-204ENST00000372246 ARL2-SNX15V9GYD0 113 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 PCSK5Q92824 1860 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 TANC2Q9HCD6 1990 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 ZDBF2Q9HCK1 2354 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 C17orf112F2Z3M2 114 aa4.45□□□□□ -1.7
ATG4A-204ENST00000372246 M0R1X1 148 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms