RNA–Protein interactions for RNA: ENST00000370850.6

HMGCLL1-203, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,171 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-203ENST00000370850 DEFA5Q01523 94 aa10.47□□□□□ -0.73
HMGCLL1-203ENST00000370850 ATP5G2Q06055 141 aa10.47□□□□□ -0.73
HMGCLL1-203ENST00000370850 EXOSC2Q13868 293 aaKnown RBP10.47□□□□□ -0.73
HMGCLL1-203ENST00000370850 C15orf32Q32M92 178 aa10.47□□□□□ -0.73
HMGCLL1-203ENST00000370850 OXLD1Q5BKU9 147 aa10.47□□□□□ -0.73
HMGCLL1-203ENST00000370850 TMEM268Q5VZI3 342 aa10.47□□□□□ -0.73
HMGCLL1-203ENST00000370850 C19orf35Q6ZS72 473 aa10.47□□□□□ -0.73
HMGCLL1-203ENST00000370850 OR1L6Q8NGR2 347 aa10.47□□□□□ -0.73
HMGCLL1-203ENST00000370850 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.46□□□□□ -0.73
HMGCLL1-203ENST00000370850 DUXBA0A1W2PPF3 345 aa10.46□□□□□ -0.73
HMGCLL1-203ENST00000370850 OR13C7P0DN81 318 aa10.46□□□□□ -0.73
HMGCLL1-203ENST00000370850 CCR6P51684 374 aa10.46□□□□□ -0.73
HMGCLL1-203ENST00000370850 IZUMO4Q1ZYL8 232 aa10.46□□□□□ -0.73
HMGCLL1-203ENST00000370850 TMED4Q7Z7H5 227 aa10.46□□□□□ -0.73
HMGCLL1-203ENST00000370850 CENPSQ8N2Z9 138 aa10.46□□□□□ -0.73
HMGCLL1-203ENST00000370850 ZNF114Q8NC26 417 aa10.46□□□□□ -0.73
HMGCLL1-203ENST00000370850 RNASE11Q8TAA1 199 aaKnown RBP10.46□□□□□ -0.73
HMGCLL1-203ENST00000370850 HINT2Q9BX68 163 aa10.46□□□□□ -0.73
HMGCLL1-203ENST00000370850 WDR12Q9GZL7 423 aaKnown RBP10.46□□□□□ -0.73
HMGCLL1-203ENST00000370850 THYN1Q9P016 225 aa10.46□□□□□ -0.73
HMGCLL1-203ENST00000370850 PEF1Q9UBV8 284 aaKnown RBP10.46□□□□□ -0.73
HMGCLL1-203ENST00000370850 FBXL7Q9UJT9 491 aa10.46□□□□□ -0.73
HMGCLL1-203ENST00000370850 F11RQ9Y624 299 aaKnown RBP10.46□□□□□ -0.73
HMGCLL1-203ENST00000370850 A0A0B4J2A0 478 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 ST8SIA3O43173 380 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 HOXD3P31249 432 aaPredicted RBP10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 MECP2P51608 486 aaKnown RBP10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 SLURP1P55000 103 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 PDLIM3Q53GG5 364 aaPredicted RBP10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 C1QL4Q86Z23 238 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 LGI3Q8N145 548 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 OR2C3Q8N628 320 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 SLC35G3Q8N808 338 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 LRTM2Q8N967 370 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 OR1P1Q8NH06 330 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 OR52E5Q8NH55 327 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 DCUN1D4Q92564 292 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 EEF1AKMT3Q96AZ1 226 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 CXorf58Q96LI9 332 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 PDCD10Q9BUL8 212 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 PLEKHA3Q9HB20 300 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 CACFD1Q9UGQ2 172 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 SHPKQ9UHJ6 478 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 DMRT1Q9Y5R6 373 aa10.45□□□□□ -0.74
HMGCLL1-203ENST00000370850 ANKRD34BA5PLL1 514 aa10.44□□□□□ -0.74
HMGCLL1-203ENST00000370850 OVOL1O14753 267 aa10.44□□□□□ -0.74
HMGCLL1-203ENST00000370850 PLA2G10O15496 165 aa10.44□□□□□ -0.74
HMGCLL1-203ENST00000370850 LYRM1O43325 122 aa10.44□□□□□ -0.74
HMGCLL1-203ENST00000370850 NDUFB8O95169 186 aa10.44□□□□□ -0.74
HMGCLL1-203ENST00000370850 SFT2D2O95562 160 aa10.44□□□□□ -0.74
HMGCLL1-203ENST00000370850 INSL3P51460 131 aa10.44□□□□□ -0.74
HMGCLL1-203ENST00000370850 EGFEM1PQ0D2K5 195 aa10.44□□□□□ -0.74
HMGCLL1-203ENST00000370850 NMSQ5H8A3 153 aa10.44□□□□□ -0.74
HMGCLL1-203ENST00000370850 C9orf66Q5T8R8 295 aa10.44□□□□□ -0.74
HMGCLL1-203ENST00000370850 Q6ZRM9 215 aa10.44□□□□□ -0.74
HMGCLL1-203ENST00000370850 VN1R17PQ8TDU5 208 aa10.44□□□□□ -0.74
HMGCLL1-203ENST00000370850 DLX4Q92988 240 aaPredicted RBP10.44□□□□□ -0.74
HMGCLL1-203ENST00000370850 GPR146Q96CH1 333 aa10.44□□□□□ -0.74
HMGCLL1-203ENST00000370850 ATP6V0BQ99437 205 aa10.44□□□□□ -0.74
HMGCLL1-203ENST00000370850 CTNNBIP1Q9NSA3 81 aaPredicted RBP10.44□□□□□ -0.74
HMGCLL1-203ENST00000370850 TRBV7-1A0A0A6YYK4 115 aa10.43□□□□□ -0.74
HMGCLL1-203ENST00000370850 LINC00854A0A1B0GVQ3 168 aa10.43□□□□□ -0.74
HMGCLL1-203ENST00000370850 SEC14L6B5MCN3 397 aa10.43□□□□□ -0.74
HMGCLL1-203ENST00000370850 BMPR1BO00238 502 aa10.43□□□□□ -0.74
HMGCLL1-203ENST00000370850 TRBV12-3P01733 135 aa10.43□□□□□ -0.74
HMGCLL1-203ENST00000370850 VAMP1P23763 118 aa10.43□□□□□ -0.74
HMGCLL1-203ENST00000370850 MFAP2P55001 183 aa10.43□□□□□ -0.74
HMGCLL1-203ENST00000370850 SPCS3P61009 180 aa10.43□□□□□ -0.74
HMGCLL1-203ENST00000370850 PPP1R1AQ13522 171 aa10.43□□□□□ -0.74
HMGCLL1-203ENST00000370850 KLF5Q13887 457 aaPredicted RBP10.43□□□□□ -0.74
HMGCLL1-203ENST00000370850 ZNF846Q147U1 533 aa10.43□□□□□ -0.74
HMGCLL1-203ENST00000370850 CCDC140Q96MF4 163 aa10.43□□□□□ -0.74
HMGCLL1-203ENST00000370850 PRR13Q9NZ81 148 aa10.43□□□□□ -0.74
HMGCLL1-203ENST00000370850 ZMAT5Q9UDW3 170 aaKnown RBP10.43□□□□□ -0.74
HMGCLL1-203ENST00000370850 CACNG5Q9UF02 275 aa10.43□□□□□ -0.74
HMGCLL1-203ENST00000370850 MFSD2BA6NFX1 497 aa10.42□□□□□ -0.74
HMGCLL1-203ENST00000370850 IFNA17P01571 189 aa10.42□□□□□ -0.74
HMGCLL1-203ENST00000370850 SULT1A3P0DMM9 295 aa10.42□□□□□ -0.74
HMGCLL1-203ENST00000370850 SULT1A4P0DMN0 295 aa10.42□□□□□ -0.74
HMGCLL1-203ENST00000370850 ERHP84090 104 aaKnown RBP10.42□□□□□ -0.74
HMGCLL1-203ENST00000370850 DEFA6Q01524 100 aa10.42□□□□□ -0.74
HMGCLL1-203ENST00000370850 RPEL1Q2QD12 228 aa10.42□□□□□ -0.74
HMGCLL1-203ENST00000370850 ANKRD55Q3KP44 614 aa10.42□□□□□ -0.74
HMGCLL1-203ENST00000370850 ACSM6Q6P461 480 aa10.42□□□□□ -0.74
HMGCLL1-203ENST00000370850 REC114Q7Z4M0 266 aa10.42□□□□□ -0.74
HMGCLL1-203ENST00000370850 LYZL2Q7Z4W2 148 aa10.42□□□□□ -0.74
HMGCLL1-203ENST00000370850 ZNF502Q8TBZ5 544 aa10.42□□□□□ -0.74
HMGCLL1-203ENST00000370850 NOTCH3Q9UM47 2321 aa10.41□□□□□ -0.74
HMGCLL1-203ENST00000370850 GGCTO75223 188 aaKnown RBP10.41□□□□□ -0.74
HMGCLL1-203ENST00000370850 SLC25A6P12236 298 aa10.41□□□□□ -0.74
HMGCLL1-203ENST00000370850 HOXA1P49639 335 aaPredicted RBP10.41□□□□□ -0.74
HMGCLL1-203ENST00000370850 ASAH1Q13510 395 aa10.41□□□□□ -0.74
HMGCLL1-203ENST00000370850 SMCO1Q147U7 214 aa10.41□□□□□ -0.74
HMGCLL1-203ENST00000370850 BSXQ3C1V8 233 aa10.41□□□□□ -0.74
HMGCLL1-203ENST00000370850 PVRIGQ6DKI7 326 aa10.41□□□□□ -0.74
HMGCLL1-203ENST00000370850 SLC25A24Q6NUK1 477 aa10.41□□□□□ -0.74
HMGCLL1-203ENST00000370850 FLVCR2Q9UPI3 526 aa10.41□□□□□ -0.74
HMGCLL1-203ENST00000370850 A0A1B0GU03 582 aa10.4□□□□□ -0.74
HMGCLL1-203ENST00000370850 C9orf170A2RU37 121 aa10.4□□□□□ -0.74
HMGCLL1-203ENST00000370850 K7EIM0 57 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms