RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 DUTP33316 252 aaKnown RBP13.32□□□□□ -0.28
CHD1L-203ENST00000369259 CEBPDP49716 269 aaPredicted RBP13.32□□□□□ -0.28
CHD1L-203ENST00000369259 PLP2Q04941 152 aa13.32□□□□□ -0.28
CHD1L-203ENST00000369259 FOXF2Q12947 444 aa13.32□□□□□ -0.28
CHD1L-203ENST00000369259 WIPI1Q5MNZ9 446 aaPredicted RBP13.32□□□□□ -0.28
CHD1L-203ENST00000369259 NHLRC2Q8NBF2 726 aa13.32□□□□□ -0.28
CHD1L-203ENST00000369259 OR4S2Q8NH73 311 aa13.32□□□□□ -0.28
CHD1L-203ENST00000369259 ZNF503Q96F45 646 aa13.32□□□□□ -0.28
CHD1L-203ENST00000369259 GRAMD2BQ96HH9 432 aa13.32□□□□□ -0.28
CHD1L-203ENST00000369259 ZNF355PQ9NSJ1 428 aa13.32□□□□□ -0.28
CHD1L-203ENST00000369259 PSG11Q9UQ72 335 aa13.32□□□□□ -0.28
CHD1L-203ENST00000369259 MYO15AQ9UKN7 3530 aa13.32□□□□□ -0.28
CHD1L-203ENST00000369259 A0A087X0K7 114 aa13.32□□□□□ -0.28
CHD1L-203ENST00000369259 OR7C2O60412 319 aa13.32□□□□□ -0.28
CHD1L-203ENST00000369259 TNFSF15O95150 251 aa13.32□□□□□ -0.28
CHD1L-203ENST00000369259 SLC35E4Q6ICL7 350 aa13.32□□□□□ -0.28
CHD1L-203ENST00000369259 TSTD1Q8NFU3 115 aa13.32□□□□□ -0.28
CHD1L-203ENST00000369259 ZNF835Q9Y2P0 537 aa13.32□□□□□ -0.28
CHD1L-203ENST00000369259 C7orf71A4D174 169 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 RFPL3SP0C7P2 107 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 AESQ08117 197 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 RNFT1Q5M7Z0 435 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 ASPHD1Q5U4P2 390 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 ZNF841Q6ZN19 808 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 FAM231DQ6ZW35 169 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 OR1B1Q8NGR6 318 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 NABP2Q9BQ15 211 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 IGHV3-43A0A0B4J1X8 118 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 LEPROTL1O95214 131 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 SP1P08047 785 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 IGHV3-43DP0DP04 118 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 APOBEC3AP31941 199 aaPredicted RBP13.31□□□□□ -0.28
CHD1L-203ENST00000369259 GPR183P32249 361 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 UFSP1Q6NVU6 142 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 LINC00173Q6ZV60 143 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 WFDC8Q8IUA0 241 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 MS4A6AQ9H2W1 248 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 TCF19Q9Y242 345 aa13.31□□□□□ -0.28
CHD1L-203ENST00000369259 TRAV3A0A0B4J244 114 aa13.3□□□□□ -0.28
CHD1L-203ENST00000369259 IGHV1-24A0A0C4DH33 117 aa13.3□□□□□ -0.28
CHD1L-203ENST00000369259 A0A1W2PRE2 83 aa13.3□□□□□ -0.28
CHD1L-203ENST00000369259 DEFB108AA8MXU0 73 aa13.3□□□□□ -0.28
CHD1L-203ENST00000369259 COX6A1P12074 109 aa13.3□□□□□ -0.28
CHD1L-203ENST00000369259 CAMPP49913 170 aa13.3□□□□□ -0.28
CHD1L-203ENST00000369259 GTF2H5Q6ZYL4 71 aa13.3□□□□□ -0.28
CHD1L-203ENST00000369259 VKORC1L1Q8N0U8 176 aa13.3□□□□□ -0.28
CHD1L-203ENST00000369259 Q8TCH9 128 aa13.3□□□□□ -0.28
CHD1L-203ENST00000369259 FAM216AQ8WUB2 273 aa13.3□□□□□ -0.28
CHD1L-203ENST00000369259 CHRDL1Q9BU40 450 aa13.3□□□□□ -0.28
CHD1L-203ENST00000369259 DUSP13Q9UII6 198 aa13.3□□□□□ -0.28
CHD1L-203ENST00000369259 TRGV8A0A0C4DH27 118 aa13.3□□□□□ -0.28
CHD1L-203ENST00000369259 ERVK-16P61578 105 aa13.3□□□□□ -0.28
CHD1L-203ENST00000369259 RTL8BQ17RB0 113 aa13.3□□□□□ -0.28
CHD1L-203ENST00000369259 CHCHD1Q96BP2 118 aaKnown RBP13.3□□□□□ -0.28
CHD1L-203ENST00000369259 SNRNP40Q96DI7 357 aaKnown RBP13.3□□□□□ -0.28
CHD1L-203ENST00000369259 ZC2HC1AQ96GY0 325 aa13.3□□□□□ -0.28
CHD1L-203ENST00000369259 R4GN57 208 aa13.3□□□□□ -0.28
CHD1L-203ENST00000369259 IGKV3D-15A0A087WSY6 115 aa13.29□□□□□ -0.28
CHD1L-203ENST00000369259 FAM231BA6NCW3 169 aa13.29□□□□□ -0.28
CHD1L-203ENST00000369259 IGHV3-64DA0A0J9YX35 117 aa13.29□□□□□ -0.28
CHD1L-203ENST00000369259 PLGLB1Q02325 96 aa13.29□□□□□ -0.28
CHD1L-203ENST00000369259 GABRA6Q16445 453 aa13.29□□□□□ -0.28
CHD1L-203ENST00000369259 ATP5L2Q7Z4Y8 100 aa13.29□□□□□ -0.28
CHD1L-203ENST00000369259 TNFRSF14Q92956 283 aa13.29□□□□□ -0.28
CHD1L-203ENST00000369259 MED12LQ86YW9 2145 aa13.28□□□□□ -0.28
CHD1L-203ENST00000369259 MT-CO3P00414 261 aa13.28□□□□□ -0.28
CHD1L-203ENST00000369259 VEGFBP49765 207 aa13.28□□□□□ -0.28
CHD1L-203ENST00000369259 TAS2R45P59539 299 aa13.28□□□□□ -0.28
CHD1L-203ENST00000369259 SEC11AP67812 179 aa13.28□□□□□ -0.28
CHD1L-203ENST00000369259 COQ2Q96H96 371 aa13.28□□□□□ -0.28
CHD1L-203ENST00000369259 WDR54Q9H977 334 aa13.28□□□□□ -0.28
CHD1L-203ENST00000369259 EPOPA6NHQ4 379 aa13.28□□□□□ -0.28
CHD1L-203ENST00000369259 HIGD1CA8MV81 97 aa13.28□□□□□ -0.28
CHD1L-203ENST00000369259 PROP1O75360 226 aa13.28□□□□□ -0.28
CHD1L-203ENST00000369259 GPR12P47775 334 aa13.28□□□□□ -0.28
CHD1L-203ENST00000369259 RAB30Q15771 203 aa13.28□□□□□ -0.28
CHD1L-203ENST00000369259 RFESDQ8TAC1 157 aa13.28□□□□□ -0.28
CHD1L-203ENST00000369259 FNDC4Q9H6D8 234 aaPredicted RBP13.28□□□□□ -0.28
CHD1L-203ENST00000369259 OCIAD1Q9NX40 245 aa13.28□□□□□ -0.28
CHD1L-203ENST00000369259 A0A1B0GXF2 115 aa13.27□□□□□ -0.29
CHD1L-203ENST00000369259 NDUFS8O00217 210 aa13.27□□□□□ -0.29
CHD1L-203ENST00000369259 SP9P0CG40 484 aa13.27□□□□□ -0.29
CHD1L-203ENST00000369259 RBPJQ06330 500 aa13.27□□□□□ -0.29
CHD1L-203ENST00000369259 TUSC5Q8IXB3 177 aa13.27□□□□□ -0.29
CHD1L-203ENST00000369259 LINC00479Q96M42 142 aa13.27□□□□□ -0.29
CHD1L-203ENST00000369259 TMEM140Q9NV12 185 aa13.27□□□□□ -0.29
CHD1L-203ENST00000369259 IDI2-AS1Q9NZ38 188 aa13.27□□□□□ -0.29
CHD1L-203ENST00000369259 FNDC10F2Z333 226 aa13.27□□□□□ -0.29
CHD1L-203ENST00000369259 SMPD2O60906 423 aa13.27□□□□□ -0.29
CHD1L-203ENST00000369259 TRAT1Q6PIZ9 186 aa13.27□□□□□ -0.29
CHD1L-203ENST00000369259 C5orf17Q8NAS9 161 aa13.27□□□□□ -0.29
CHD1L-203ENST00000369259 MAP1LC3CQ9BXW4 147 aa13.27□□□□□ -0.29
CHD1L-203ENST00000369259 KIAA0100Q14667 2235 aaKnown RBP13.26□□□□□ -0.29
CHD1L-203ENST00000369259 SRFP11831 508 aa13.26□□□□□ -0.29
CHD1L-203ENST00000369259 ZNF766Q5HY98 468 aa13.26□□□□□ -0.29
CHD1L-203ENST00000369259 C2orf91Q6ZV80 131 aa13.26□□□□□ -0.29
CHD1L-203ENST00000369259 SSX8Q7RTT4 187 aa13.26□□□□□ -0.29
CHD1L-203ENST00000369259 PMCHL2Q9BQD1 86 aa13.26□□□□□ -0.29
CHD1L-203ENST00000369259 FAM234AQ9H0X4 552 aa13.26□□□□□ -0.29
CHD1L-203ENST00000369259 LAMA1P25391 3075 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 95.7 ms