RNA–Protein interactions for RNA: ENST00000368841.6

SNX27-202, Transcript of sorting nexin family member 27, humanhuman

TSL 1 (best)

Gene SNX27, Length 7,070 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-202ENST00000368841 OR11H12B2RN74 326 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 SAA2P0DJI9 122 aaPredicted RBP15.26■□□□□ 0.03
SNX27-202ENST00000368841 TIMM23BQ5SRD1 257 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 OR11H1Q8NG94 326 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 OR11H2Q8NH07 326 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 FAM90A10PA6NDY2 464 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 FAM90A18PA6NE21 464 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 FAM90A16PA6NEW6 464 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 FAM90A20PA6NIJ5 464 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 FAM90A8PA6NJQ4 464 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 FAM90A7PA6NKC0 464 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 FAM90A22PA8MWA6 464 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 FAM90A12PA8MX19 464 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 FAM90A5PA8MXJ8 464 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 FAM90A23PA8MXZ1 464 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 FAM90A15PP0C7V4 464 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 FAM90A13PP0C7W8 464 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 FAM90A14PP0C7W9 464 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 FAM90A24PP0C7X0 464 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 DEFB121Q5J5C9 76 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 LINC01590Q5TEZ4 76 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 EIF4EBP2Q13542 120 aaPredicted RBP15.26■□□□□ 0.03
SNX27-202ENST00000368841 ZNF585BQ52M93 769 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 HOXA5P20719 270 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 ZNF600Q6ZNG1 722 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 GGACTQ9BVM4 153 aa15.26■□□□□ 0.03
SNX27-202ENST00000368841 PSG7Q13046 419 aa15.25■□□□□ 0.03
SNX27-202ENST00000368841 TRAV21A0A0B4J279 112 aa15.25■□□□□ 0.03
SNX27-202ENST00000368841 UMODP07911 640 aa15.25■□□□□ 0.03
SNX27-202ENST00000368841 RAB9AP51151 201 aa15.25■□□□□ 0.03
SNX27-202ENST00000368841 OR5A1Q8NGJ0 315 aa15.25■□□□□ 0.03
SNX27-202ENST00000368841 FAM57AQ8TBR7 257 aa15.25■□□□□ 0.03
SNX27-202ENST00000368841 HIST1H2BAQ96A08 127 aa15.25■□□□□ 0.03
SNX27-202ENST00000368841 FAM90A26D6RGX4 464 aa15.25■□□□□ 0.03
SNX27-202ENST00000368841 FER1L6-AS1Q8NA97 138 aa15.25■□□□□ 0.03
SNX27-202ENST00000368841 LINC00614P0C842 121 aa15.25■□□□□ 0.03
SNX27-202ENST00000368841 UBE2DNLQ8IWF7 75 aa15.25■□□□□ 0.03
SNX27-202ENST00000368841 PLPPR1Q8TBJ4 325 aa15.25■□□□□ 0.03
SNX27-202ENST00000368841 RCC1LQ96I51 464 aaKnown RBP15.24■□□□□ 0.03
SNX27-202ENST00000368841 MESP1Q9BRJ9 268 aa15.24■□□□□ 0.03
SNX27-202ENST00000368841 KLRD1Q13241 179 aa15.24■□□□□ 0.03
SNX27-202ENST00000368841 RPP21Q9H633 154 aaKnown RBP15.24■□□□□ 0.03
SNX27-202ENST00000368841 RPRMQ9NS64 109 aa15.24■□□□□ 0.03
SNX27-202ENST00000368841 TRAV40A0A0B4J280 105 aa15.24■□□□□ 0.03
SNX27-202ENST00000368841 TMEM14DPA8MWL7 114 aa15.24■□□□□ 0.03
SNX27-202ENST00000368841 CA1P00915 261 aaPredicted RBP15.24■□□□□ 0.03
SNX27-202ENST00000368841 A0A0G2JK05 382 aa15.24■□□□□ 0.03
SNX27-202ENST00000368841 KBTBD11-OT1A0A1B0GTJ5 212 aa15.24■□□□□ 0.03
SNX27-202ENST00000368841 PYYP10082 97 aa15.24■□□□□ 0.03
SNX27-202ENST00000368841 SRSF7Q16629 238 aaKnown RBP eCLIP15.24■□□□□ 0.03
SNX27-202ENST00000368841 PTPRFP10586 1907 aa15.23■□□□□ 0.03
SNX27-202ENST00000368841 A0A1B0GWB2 263 aa15.23■□□□□ 0.03
SNX27-202ENST00000368841 SAPCD1Q5SSQ6 148 aa15.23■□□□□ 0.03
SNX27-202ENST00000368841 TMEM50AO95807 157 aa15.23■□□□□ 0.03
SNX27-202ENST00000368841 RPL35AP18077 110 aaKnown RBP15.23■□□□□ 0.03
SNX27-202ENST00000368841 FMC1Q96HJ9 113 aa15.23■□□□□ 0.03
SNX27-202ENST00000368841 DEPPQ9NTK1 212 aa15.23■□□□□ 0.03
SNX27-202ENST00000368841 ARID1AO14497 2285 aa15.23■□□□□ 0.03
SNX27-202ENST00000368841 GLRXP35754 106 aa15.23■□□□□ 0.03
SNX27-202ENST00000368841 RBBP6Q7Z6E9 1792 aaKnown RBP15.23■□□□□ 0.03
SNX27-202ENST00000368841 TRAV2A0A0B4J234 112 aa15.23■□□□□ 0.03
SNX27-202ENST00000368841 IL36BQ9NZH7 164 aa15.23■□□□□ 0.03
SNX27-202ENST00000368841 A0A1W2PR77 199 aa15.23■□□□□ 0.03
SNX27-202ENST00000368841 IGHV3-53P01767 116 aa15.23■□□□□ 0.03
SNX27-202ENST00000368841 LRTM2Q8N967 370 aa15.23■□□□□ 0.03
SNX27-202ENST00000368841 PEMTQ9UBM1 199 aa15.23■□□□□ 0.03
SNX27-202ENST00000368841 TRGV4A0A0C4DH28 118 aa15.22■□□□□ 0.03
SNX27-202ENST00000368841 ZXDCQ2QGD7 858 aaPredicted RBP15.22■□□□□ 0.03
SNX27-202ENST00000368841 WDYHV1Q96HA8 205 aa15.22■□□□□ 0.03
SNX27-202ENST00000368841 HIGD1CA8MV81 97 aa15.22■□□□□ 0.03
SNX27-202ENST00000368841 EFNB1P98172 346 aa15.22■□□□□ 0.03
SNX27-202ENST00000368841 MEF2CQ06413 473 aaPredicted RBP15.22■□□□□ 0.03
SNX27-202ENST00000368841 TMEM167AQ8TBQ9 72 aa15.22■□□□□ 0.03
SNX27-202ENST00000368841 ASCL2Q99929 193 aa15.22■□□□□ 0.03
SNX27-202ENST00000368841 TMEM183AQ8IXX5 376 aa15.22■□□□□ 0.03
SNX27-202ENST00000368841 TMEM105Q8N8V8 129 aa15.22■□□□□ 0.03
SNX27-202ENST00000368841 VGLL1Q99990 258 aa15.22■□□□□ 0.03
SNX27-202ENST00000368841 RTBDNQ9BSG5 229 aaPredicted RBP15.22■□□□□ 0.03
SNX27-202ENST00000368841 H3BRM9 83 aa15.22■□□□□ 0.03
SNX27-202ENST00000368841 H7C1H1 209 aa15.22■□□□□ 0.03
SNX27-202ENST00000368841 GZMBP10144 247 aa15.22■□□□□ 0.03
SNX27-202ENST00000368841 PINLYPA6NC86 204 aa15.21■□□□□ 0.03
SNX27-202ENST00000368841 RBMY1BA6NDE4 496 aaKnown RBP15.21■□□□□ 0.03
SNX27-202ENST00000368841 RBMY1EA6NEQ0 496 aaKnown RBP15.21■□□□□ 0.03
SNX27-202ENST00000368841 RBMY1DP0C7P1 496 aaKnown RBP15.21■□□□□ 0.03
SNX27-202ENST00000368841 RBMY1A1P0DJD3 496 aaKnown RBP15.21■□□□□ 0.03
SNX27-202ENST00000368841 RBMY1CP0DJD4 496 aa15.21■□□□□ 0.03
SNX27-202ENST00000368841 COX5BP10606 129 aa15.21■□□□□ 0.03
SNX27-202ENST00000368841 ADMP35318 185 aa15.21■□□□□ 0.03
SNX27-202ENST00000368841 AICDAQ9GZX7 198 aa15.21■□□□□ 0.03
SNX27-202ENST00000368841 NPDC1Q9NQX5 325 aaPredicted RBP15.21■□□□□ 0.03
SNX27-202ENST00000368841 CSRP2Q16527 193 aa15.21■□□□□ 0.03
SNX27-202ENST00000368841 SMDT1Q9H4I9 107 aa15.21■□□□□ 0.03
SNX27-202ENST00000368841 CTHRC1Q96CG8 243 aa15.21■□□□□ 0.03
SNX27-202ENST00000368841 SPRR3Q9UBC9 169 aa15.21■□□□□ 0.03
SNX27-202ENST00000368841 A0A0G2JLM5 398 aa15.21■□□□□ 0.02
SNX27-202ENST00000368841 CRPP02741 224 aa15.2■□□□□ 0.02
SNX27-202ENST00000368841 NEU4Q8WWR8 484 aaPredicted RBP15.2■□□□□ 0.02
SNX27-202ENST00000368841 FNDC4Q9H6D8 234 aaPredicted RBP15.2■□□□□ 0.02
SNX27-202ENST00000368841 PGPEP1LA6NFU8 196 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms