RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 C1orf229Q6ZS94 237 aaPredicted RBP8.33□□□□□ -1.08
TPM3-209ENST00000368527 TGIF2LXQ8IUE1 241 aa8.33□□□□□ -1.08
TPM3-209ENST00000368527 TEX45Q8NA69 505 aa8.33□□□□□ -1.08
TPM3-209ENST00000368527 STXBP6Q8NFX7 210 aa8.33□□□□□ -1.08
TPM3-209ENST00000368527 OR4X1Q8NH49 305 aa8.33□□□□□ -1.08
TPM3-209ENST00000368527 C22orf15Q8WYQ4 148 aa8.33□□□□□ -1.08
TPM3-209ENST00000368527 SFRP2Q96HF1 295 aa8.33□□□□□ -1.08
TPM3-209ENST00000368527 RNF5Q99942 180 aa8.33□□□□□ -1.08
TPM3-209ENST00000368527 NABP2Q9BQ15 211 aa8.33□□□□□ -1.08
TPM3-209ENST00000368527 SRSF8Q9BRL6 282 aaKnown RBP8.33□□□□□ -1.08
TPM3-209ENST00000368527 MRPL20Q9BYC9 149 aaKnown RBP8.33□□□□□ -1.08
TPM3-209ENST00000368527 ZNF292O60281 2723 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 WDFY3Q8IZQ1 3526 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 FRYLO94915 3013 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 DVL1O14640 695 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 IGHV3-7P01780 117 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 OR10J4P0C629 311 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 C8orf88P0DMB2 117 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 ATP5G3P48201 142 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 PDLIM4P50479 330 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 ACTL10Q5JWF8 245 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 FAM78BQ5VT40 261 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 SLC16A13Q7RTY0 426 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 MMD2Q8IY49 270 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 OR4P4Q8NGL7 312 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 OR10G8Q8NGN5 311 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 OR1P1Q8NH06 330 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 SSMEM1Q8WWF3 244 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 H1FXQ92522 213 aaKnown RBP8.32□□□□□ -1.08
TPM3-209ENST00000368527 CCL17Q92583 94 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 ST6GALNAC6Q969X2 333 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 TMEM133Q9H2Q1 129 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 GSN-AS1Q9NRJ2 163 aa8.32□□□□□ -1.08
TPM3-209ENST00000368527 A0A1W2PPQ1 181 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 SHISA9B4DS77 424 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 MMP23AO75900 390 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 IGKV1-16P04430 117 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 IGHV1-8P0DP01 117 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 IGFBP2P18065 325 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 NPPCP23582 126 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 LOXP28300 417 aaPredicted RBP8.31□□□□□ -1.08
TPM3-209ENST00000368527 OR10J1P30954 320 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 DLX6P56179 175 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 UBE2G2P60604 165 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 GAMTQ14353 236 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 GCSAMLQ5JQS6 135 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 PVRIGQ6DKI7 326 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 DUX4L9Q6RFH8 374 aaPredicted RBP8.31□□□□□ -1.08
TPM3-209ENST00000368527 C22orf34Q6ZV56 151 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 THAP8Q8NA92 274 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 ZNF114Q8NC26 417 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 BEND2Q8NDZ0 799 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 OR5R1Q8NH85 324 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 SNRNP40Q96DI7 357 aaKnown RBP8.31□□□□□ -1.08
TPM3-209ENST00000368527 C1orf159Q96HA4 380 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 WFIKKN1Q96NZ8 548 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 CHRDL1Q9BU40 450 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 ZNF430Q9H8G1 570 aaPredicted RBP8.31□□□□□ -1.08
TPM3-209ENST00000368527 MIOXQ9UGB7 285 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 RALYQ9UKM9 306 aaKnown RBP8.31□□□□□ -1.08
TPM3-209ENST00000368527 CACNA1DQ01668 2161 aa8.31□□□□□ -1.08
TPM3-209ENST00000368527 TANC2Q9HCD6 1990 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 CACNA1AO00555 2505 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 SRRM4A7MD48 611 aaKnown RBP8.3□□□□□ -1.08
TPM3-209ENST00000368527 E7EQL1 145 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 GCGP01275 180 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 MT-ND6P03923 174 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 C1QTNF9P0C862 333 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 CHRNB4P30926 498 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 GNG4P50150 75 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 PPOXP50336 477 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 TAS2R60P59551 318 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 YPEL3P61236 119 aaPredicted RBP8.3□□□□□ -1.08
TPM3-209ENST00000368527 TIGITQ495A1 244 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 TEX38Q6PEX7 206 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 OR10D4PQ8NGN7 298 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 C8orf46Q8TAG6 207 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 TMEM18Q96B42 140 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 SMIM12Q96EX1 92 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 SEPSECSQ9HD40 501 aaKnown RBP8.3□□□□□ -1.08
TPM3-209ENST00000368527 DNAJC4Q9NNZ3 241 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 IL36BQ9NZH7 164 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 MSRB2Q9Y3D2 182 aa8.3□□□□□ -1.08
TPM3-209ENST00000368527 NCOR2Q9Y618 2525 aa8.29□□□□□ -1.08
TPM3-209ENST00000368527 SCO2A0A1W2PP80 73 aa8.29□□□□□ -1.08
TPM3-209ENST00000368527 TCRBV4S1A1TA0A5B7 111 aa8.29□□□□□ -1.08
TPM3-209ENST00000368527 XKRY2A2RUG3 117 aa8.29□□□□□ -1.08
TPM3-209ENST00000368527 HELTA6NFD8 242 aa8.29□□□□□ -1.08
TPM3-209ENST00000368527 ACTL6BO94805 426 aa8.29□□□□□ -1.08
TPM3-209ENST00000368527 HIST1H1BP16401 226 aaKnown RBP8.29□□□□□ -1.08
TPM3-209ENST00000368527 CCL3L1P16619 93 aa8.29□□□□□ -1.08
TPM3-209ENST00000368527 CA7P43166 264 aa8.29□□□□□ -1.08
TPM3-209ENST00000368527 CNN1P51911 297 aaKnown RBP8.29□□□□□ -1.08
TPM3-209ENST00000368527 PSG5Q15238 335 aa8.29□□□□□ -1.08
TPM3-209ENST00000368527 WDR73Q6P4I2 378 aa8.29□□□□□ -1.08
TPM3-209ENST00000368527 NECAP1Q8NC96 275 aa8.29□□□□□ -1.08
TPM3-209ENST00000368527 OR1L6Q8NGR2 347 aa8.29□□□□□ -1.08
TPM3-209ENST00000368527 PACRGQ96M98 296 aaPredicted RBP8.29□□□□□ -1.08
TPM3-209ENST00000368527 SLC25A33Q9BSK2 321 aa8.29□□□□□ -1.08
TPM3-209ENST00000368527 GPR61Q9BZJ8 451 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms