RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TAS2R20P59543 309 aa11.86□□□□□ -0.51
CKS1B-202ENST00000368436 DEFB135Q30KP9 77 aa11.86□□□□□ -0.51
CKS1B-202ENST00000368436 LYSMD2Q8IV50 215 aa11.86□□□□□ -0.51
CKS1B-202ENST00000368436 CMTM1Q8IZ96 169 aa11.86□□□□□ -0.51
CKS1B-202ENST00000368436 OR5H2Q8NGV7 314 aa11.86□□□□□ -0.51
CKS1B-202ENST00000368436 OR6F1Q8NGZ6 308 aa11.86□□□□□ -0.51
CKS1B-202ENST00000368436 OR5B3Q8NH48 314 aa11.86□□□□□ -0.51
CKS1B-202ENST00000368436 RNF183Q96D59 192 aa11.86□□□□□ -0.51
CKS1B-202ENST00000368436 FXYD6Q9H0Q3 95 aa11.86□□□□□ -0.51
CKS1B-202ENST00000368436 FKBP11Q9NYL4 201 aa11.86□□□□□ -0.51
CKS1B-202ENST00000368436 PRNDQ9UKY0 176 aa11.86□□□□□ -0.51
CKS1B-202ENST00000368436 CXorf65A6NEN9 183 aa11.85□□□□□ -0.51
CKS1B-202ENST00000368436 NUPR2A6NF83 97 aa11.85□□□□□ -0.51
CKS1B-202ENST00000368436 OR4C46A6NHA9 309 aa11.85□□□□□ -0.51
CKS1B-202ENST00000368436 DBX1A6NMT0 343 aa11.85□□□□□ -0.51
CKS1B-202ENST00000368436 C15orf62A8K5M9 175 aa11.85□□□□□ -0.51
CKS1B-202ENST00000368436 CTSGP08311 255 aa11.85□□□□□ -0.51
CKS1B-202ENST00000368436 RPS19P39019 145 aaKnown RBP11.85□□□□□ -0.51
CKS1B-202ENST00000368436 PMS2P11Q13670 270 aa11.85□□□□□ -0.51
CKS1B-202ENST00000368436 KCTD21Q4G0X4 260 aa11.85□□□□□ -0.51
CKS1B-202ENST00000368436 TMEM69Q5SWH9 247 aa11.85□□□□□ -0.51
CKS1B-202ENST00000368436 STPG3Q8N7X2 389 aa11.85□□□□□ -0.51
CKS1B-202ENST00000368436 TMEM56Q96MV1 263 aa11.85□□□□□ -0.51
CKS1B-202ENST00000368436 C20orf24Q9BUV8 137 aa11.85□□□□□ -0.51
CKS1B-202ENST00000368436 FAM212BQ9NTI7 297 aaPredicted RBP11.85□□□□□ -0.51
CKS1B-202ENST00000368436 TMEM14BQ9NUH8 114 aa11.85□□□□□ -0.51
CKS1B-202ENST00000368436 SMPXQ9UHP9 88 aa11.85□□□□□ -0.51
CKS1B-202ENST00000368436 IGHV3OR16-8A0A075B7F1 116 aa11.84□□□□□ -0.51
CKS1B-202ENST00000368436 C15orf61A6NNL5 157 aa11.84□□□□□ -0.51
CKS1B-202ENST00000368436 ZNF207O43670 478 aaKnown RBP11.84□□□□□ -0.51
CKS1B-202ENST00000368436 CTSDP07339 412 aaPredicted RBP11.84□□□□□ -0.51
CKS1B-202ENST00000368436 FCGR2BP31994 310 aaPredicted RBP11.84□□□□□ -0.51
CKS1B-202ENST00000368436 PRSS3P35030 304 aa11.84□□□□□ -0.51
CKS1B-202ENST00000368436 Q56UQ5 140 aa11.84□□□□□ -0.51
CKS1B-202ENST00000368436 CEMP1Q6PRD7 247 aaPredicted RBP11.84□□□□□ -0.51
CKS1B-202ENST00000368436 SAMD12Q8N8I0 201 aa11.84□□□□□ -0.51
CKS1B-202ENST00000368436 UBAC2Q8NBM4 344 aa11.84□□□□□ -0.51
CKS1B-202ENST00000368436 TSPAN14Q8NG11 270 aa11.84□□□□□ -0.51
CKS1B-202ENST00000368436 OR1P1Q8NH06 330 aa11.84□□□□□ -0.51
CKS1B-202ENST00000368436 GALNT14Q96FL9 552 aa11.84□□□□□ -0.51
CKS1B-202ENST00000368436 TSC22D3Q99576 134 aa11.84□□□□□ -0.51
CKS1B-202ENST00000368436 MAP6D1Q9H9H5 199 aa11.84□□□□□ -0.51
CKS1B-202ENST00000368436 LY6G6CO95867 125 aa11.83□□□□□ -0.52
CKS1B-202ENST00000368436 YIPF6Q96EC8 236 aa11.83□□□□□ -0.52
CKS1B-202ENST00000368436 RNF2Q99496 336 aa11.83□□□□□ -0.52
CKS1B-202ENST00000368436 TXN2Q99757 166 aa11.83□□□□□ -0.52
CKS1B-202ENST00000368436 IGHV7-4-1A0A0J9YVY3 117 aa11.82□□□□□ -0.52
CKS1B-202ENST00000368436 I3L2K1 104 aa11.82□□□□□ -0.52
CKS1B-202ENST00000368436 CHEK1O14757 476 aa11.82□□□□□ -0.52
CKS1B-202ENST00000368436 RPL35AP18077 110 aaKnown RBP11.82□□□□□ -0.52
CKS1B-202ENST00000368436 HRH1P35367 487 aa11.82□□□□□ -0.52
CKS1B-202ENST00000368436 RELQ04864 619 aaPredicted RBP11.82□□□□□ -0.52
CKS1B-202ENST00000368436 PHLDA2Q53GA4 152 aa11.82□□□□□ -0.52
CKS1B-202ENST00000368436 LPCAT3Q6P1A2 487 aa11.82□□□□□ -0.52
CKS1B-202ENST00000368436 GPX8Q8TED1 209 aa11.82□□□□□ -0.52
CKS1B-202ENST00000368436 SEC22AQ96IW7 307 aa11.82□□□□□ -0.52
CKS1B-202ENST00000368436 OR10C1Q96KK4 312 aa11.82□□□□□ -0.52
CKS1B-202ENST00000368436 RHPN1-AS1Q9BWJ2 59 aa11.82□□□□□ -0.52
CKS1B-202ENST00000368436 NUPL2O15504 423 aaKnown RBP11.81□□□□□ -0.52
CKS1B-202ENST00000368436 HLA-DMAP28067 261 aa11.81□□□□□ -0.52
CKS1B-202ENST00000368436 MFAP4P55083 255 aa11.81□□□□□ -0.52
CKS1B-202ENST00000368436 CMC4P56277 68 aaPredicted RBP11.81□□□□□ -0.52
CKS1B-202ENST00000368436 TBC1D26Q86UD7 250 aa11.81□□□□□ -0.52
CKS1B-202ENST00000368436 ZNF114Q8NC26 417 aa11.81□□□□□ -0.52
CKS1B-202ENST00000368436 TMEM116Q8NCL8 245 aa11.81□□□□□ -0.52
CKS1B-202ENST00000368436 SLC25A46Q96AG3 418 aa11.81□□□□□ -0.52
CKS1B-202ENST00000368436 NXF2Q9GZY0 626 aaKnown RBP11.81□□□□□ -0.52
CKS1B-202ENST00000368436 IGKV1-39P01597 117 aa11.8□□□□□ -0.52
CKS1B-202ENST00000368436 IGKV1D-39P04432 117 aa11.8□□□□□ -0.52
CKS1B-202ENST00000368436 EIF4EP06730 217 aaKnown RBP11.8□□□□□ -0.52
CKS1B-202ENST00000368436 S100GP29377 79 aa11.8□□□□□ -0.52
CKS1B-202ENST00000368436 UCP3P55916 312 aa11.8□□□□□ -0.52
CKS1B-202ENST00000368436 LSM3P62310 102 aaKnown RBP11.8□□□□□ -0.52
CKS1B-202ENST00000368436 PRCDQ00LT1 54 aa11.8□□□□□ -0.52
CKS1B-202ENST00000368436 FAM90A2PQ658T7 463 aa11.8□□□□□ -0.52
CKS1B-202ENST00000368436 H2BFWTQ7Z2G1 175 aa11.8□□□□□ -0.52
CKS1B-202ENST00000368436 APRG1Q8IVJ8 170 aa11.8□□□□□ -0.52
CKS1B-202ENST00000368436 TMEM217Q8N7C4 229 aa11.8□□□□□ -0.52
CKS1B-202ENST00000368436 C6orf62Q9GZU0 229 aaPredicted RBP11.8□□□□□ -0.52
CKS1B-202ENST00000368436 KLK5Q9Y337 293 aaPredicted RBP11.8□□□□□ -0.52
CKS1B-202ENST00000368436 TRAV14DV4A0A0A6YYC5 116 aa11.79□□□□□ -0.52
CKS1B-202ENST00000368436 TSPAN5P62079 268 aa11.79□□□□□ -0.52
CKS1B-202ENST00000368436 OR4A16Q8NH70 328 aa11.79□□□□□ -0.52
CKS1B-202ENST00000368436 MISP3Q96FF7 219 aa11.79□□□□□ -0.52
CKS1B-202ENST00000368436 CMTM3Q96MX0 182 aa11.79□□□□□ -0.52
CKS1B-202ENST00000368436 CSTL1Q9H114 145 aa11.79□□□□□ -0.52
CKS1B-202ENST00000368436 SCPEP1Q9HB40 452 aa11.79□□□□□ -0.52
CKS1B-202ENST00000368436 IGHV3-49A0A0A0MS15 119 aa11.78□□□□□ -0.52
CKS1B-202ENST00000368436 YIF1AO95070 293 aa11.78□□□□□ -0.52
CKS1B-202ENST00000368436 MT-CO2P00403 227 aa11.78□□□□□ -0.52
CKS1B-202ENST00000368436 APOA1P02647 267 aa11.78□□□□□ -0.52
CKS1B-202ENST00000368436 HSPE1P61604 102 aaKnown RBP11.78□□□□□ -0.52
CKS1B-202ENST00000368436 ZNF124Q15973 351 aa11.78□□□□□ -0.52
CKS1B-202ENST00000368436 MPTX1A8MV57 137 aa11.77□□□□□ -0.53
CKS1B-202ENST00000368436 RCVRNP35243 200 aa11.77□□□□□ -0.53
CKS1B-202ENST00000368436 TFPI2P48307 235 aa11.77□□□□□ -0.53
CKS1B-202ENST00000368436 GATAD1Q8WUU5 269 aa11.77□□□□□ -0.53
CKS1B-202ENST00000368436 PHLDA1Q8WV24 401 aaPredicted RBP11.77□□□□□ -0.53
CKS1B-202ENST00000368436 MRGPRFQ96AM1 343 aa11.77□□□□□ -0.53
CKS1B-202ENST00000368436 COMMD3Q9UBI1 195 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms