RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 SUB1P53999 127 aaKnown RBP eCLIP9.9□□□□□ -0.82
EFNA1-201ENST00000368406 WT1-ASQ06250 92 aa9.9□□□□□ -0.82
EFNA1-201ENST00000368406 FOXE3Q13461 319 aa9.9□□□□□ -0.82
EFNA1-201ENST00000368406 C2orf68Q2NKX9 166 aa9.9□□□□□ -0.82
EFNA1-201ENST00000368406 ASPHD1Q5U4P2 390 aa9.9□□□□□ -0.82
EFNA1-201ENST00000368406 TTC9CQ8N5M4 171 aa9.9□□□□□ -0.82
EFNA1-201ENST00000368406 PAIP2BQ9ULR5 123 aaKnown RBP9.9□□□□□ -0.82
EFNA1-201ENST00000368406 LSM5Q9Y4Y9 91 aaKnown RBP9.9□□□□□ -0.82
EFNA1-201ENST00000368406 FBN3Q75N90 2809 aa9.9□□□□□ -0.82
EFNA1-201ENST00000368406 TCRBV4S1A1TA0A5B7 111 aa9.9□□□□□ -0.83
EFNA1-201ENST00000368406 L7N2F9 121 aa9.9□□□□□ -0.83
EFNA1-201ENST00000368406 SYNGR2O43760 224 aa9.9□□□□□ -0.83
EFNA1-201ENST00000368406 PITX3O75364 302 aa9.9□□□□□ -0.83
EFNA1-201ENST00000368406 IFNA10P01566 189 aa9.9□□□□□ -0.83
EFNA1-201ENST00000368406 IGHG4P01861 327 aa9.9□□□□□ -0.83
EFNA1-201ENST00000368406 PRH1P02810 166 aa9.9□□□□□ -0.83
EFNA1-201ENST00000368406 ELANEP08246 267 aa9.9□□□□□ -0.83
EFNA1-201ENST00000368406 RRAS2P62070 204 aaPredicted RBP9.9□□□□□ -0.83
EFNA1-201ENST00000368406 VAMP2P63027 116 aa9.9□□□□□ -0.83
EFNA1-201ENST00000368406 CYCSP99999 105 aaKnown RBP9.9□□□□□ -0.83
EFNA1-201ENST00000368406 CFHR3Q02985 330 aa9.9□□□□□ -0.83
EFNA1-201ENST00000368406 AARDQ4LEZ3 155 aa9.9□□□□□ -0.83
EFNA1-201ENST00000368406 C19orf35Q6ZS72 473 aa9.9□□□□□ -0.83
EFNA1-201ENST00000368406 OR4D5Q8NGN0 318 aa9.9□□□□□ -0.83
EFNA1-201ENST00000368406 CIB3Q96Q77 187 aaPredicted RBP9.9□□□□□ -0.83
EFNA1-201ENST00000368406 TNCP24821 2201 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 hCG_2014768A0A024R1R8 64 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 NUDT19A8MXV4 375 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 H3BUA1 57 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 CD28P10747 220 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 HIST1H1BP16401 226 aaKnown RBP9.89□□□□□ -0.83
EFNA1-201ENST00000368406 CTRB1P17538 263 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 PVALBP20472 110 aaPredicted RBP9.89□□□□□ -0.83
EFNA1-201ENST00000368406 PPIFP30405 207 aaKnown RBP9.89□□□□□ -0.83
EFNA1-201ENST00000368406 HTR2BP41595 481 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 RPP30P78346 268 aaKnown RBP9.89□□□□□ -0.83
EFNA1-201ENST00000368406 FCN2Q15485 313 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 LRRC37A5PQ49AS3 106 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 C19orf54Q5BKX5 351 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 CTRB2Q6GPI1 263 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 SLC25A24Q6NUK1 477 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 LCNL1Q6ZST4 164 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 OR2C3Q8N628 320 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 SLC24A4Q8NFF2 622 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 OR1L6Q8NGR2 347 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 MISP3Q96FF7 219 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 SLA2Q9H6Q3 261 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 ZFP57Q9NU63 452 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 THYN1Q9P016 225 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 F11RQ9Y624 299 aaKnown RBP9.89□□□□□ -0.83
EFNA1-201ENST00000368406 WNK1Q9H4A3 2382 aa9.89□□□□□ -0.83
EFNA1-201ENST00000368406 MGAM2Q2M2H8 2515 aa9.88□□□□□ -0.83
EFNA1-201ENST00000368406 A0A1W2PRX2 142 aa9.88□□□□□ -0.83
EFNA1-201ENST00000368406 SOX15O60248 233 aa9.88□□□□□ -0.83
EFNA1-201ENST00000368406 OR2J3O76001 311 aa9.88□□□□□ -0.83
EFNA1-201ENST00000368406 IGLV1-40P01703 118 aa9.88□□□□□ -0.83
EFNA1-201ENST00000368406 RPLP1P05386 114 aaKnown RBP9.88□□□□□ -0.83
EFNA1-201ENST00000368406 POLR2GP62487 172 aaKnown RBP eCLIP9.88□□□□□ -0.83
EFNA1-201ENST00000368406 RHOGP84095 191 aa9.88□□□□□ -0.83
EFNA1-201ENST00000368406 DEFA5Q01523 94 aa9.88□□□□□ -0.83
EFNA1-201ENST00000368406 PDLIM3Q53GG5 364 aaPredicted RBP9.88□□□□□ -0.83
EFNA1-201ENST00000368406 NMES1Q9C002 83 aa9.88□□□□□ -0.83
EFNA1-201ENST00000368406 RCL1Q9Y2P8 373 aaKnown RBP9.88□□□□□ -0.83
EFNA1-201ENST00000368406 FAM223BA6NKX1 122 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 LY86O95711 162 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 MBPP02686 304 aaPredicted RBP9.87□□□□□ -0.83
EFNA1-201ENST00000368406 RLN2P04090 185 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 CRYGCP07315 174 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 OR8U8P0C7N1 319 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 PET100P0DJ07 73 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 NPY1RP25929 384 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 PSMB8P28062 276 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 RAB9AP51151 201 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 BCAP31P51572 246 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 H2BFSP57053 126 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 CD83Q01151 205 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 NSUN5P1Q3KNT7 163 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 NOXA1Q86UR1 476 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 NDUFA11Q86Y39 141 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 FAM223AQ8IWN6 122 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 OR11H7Q8NGC8 314 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 OR1P1Q8NH06 330 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 PINX1Q96BK5 328 aaKnown RBP9.87□□□□□ -0.83
EFNA1-201ENST00000368406 P2RX4Q99571 388 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 CITED2Q99967 270 aaPredicted RBP9.87□□□□□ -0.83
EFNA1-201ENST00000368406 FBXL7Q9UJT9 491 aa9.87□□□□□ -0.83
EFNA1-201ENST00000368406 TSSC4Q9Y5U2 329 aaPredicted RBP9.87□□□□□ -0.83
EFNA1-201ENST00000368406 A0A0G2JLM5 398 aa9.86□□□□□ -0.83
EFNA1-201ENST00000368406 INS-IGF2F8WCM5 200 aa9.86□□□□□ -0.83
EFNA1-201ENST00000368406 H3BP45 60 aa9.86□□□□□ -0.83
EFNA1-201ENST00000368406 K7EPK0 472 aa9.86□□□□□ -0.83
EFNA1-201ENST00000368406 CORTO00230 105 aa9.86□□□□□ -0.83
EFNA1-201ENST00000368406 CXCL3P19876 107 aa9.86□□□□□ -0.83
EFNA1-201ENST00000368406 RAB11AP62491 216 aa9.86□□□□□ -0.83
EFNA1-201ENST00000368406 RPL23AP62750 156 aaKnown RBP9.86□□□□□ -0.83
EFNA1-201ENST00000368406 ID3Q02535 119 aa9.86□□□□□ -0.83
EFNA1-201ENST00000368406 ATP5G2Q06055 141 aa9.86□□□□□ -0.83
EFNA1-201ENST00000368406 RAB32Q13637 225 aa9.86□□□□□ -0.83
EFNA1-201ENST00000368406 SPANXN5Q5MJ07 72 aa9.86□□□□□ -0.83
EFNA1-201ENST00000368406 HIST2H2BDQ6DRA6 164 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms