RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 MRPL13Q9BYD1 178 aaKnown RBP10.79□□□□□ -0.68
PTPRK-207ENST00000368226 ERVH48-1M5A8F1 160 aa10.79□□□□□ -0.68
PTPRK-207ENST00000368226 CBLN1P23435 193 aa10.79□□□□□ -0.68
PTPRK-207ENST00000368226 SDHCQ99643 169 aaPredicted RBP10.79□□□□□ -0.68
PTPRK-207ENST00000368226 IGHV1-46P01743 117 aa10.79□□□□□ -0.68
PTPRK-207ENST00000368226 SMAGPQ0VAQ4 97 aa10.79□□□□□ -0.68
PTPRK-207ENST00000368226 TMEM30BQ3MIR4 351 aa10.79□□□□□ -0.68
PTPRK-207ENST00000368226 GPR61Q9BZJ8 451 aa10.79□□□□□ -0.68
PTPRK-207ENST00000368226 TRPM7Q96QT4 1865 aa10.78□□□□□ -0.68
PTPRK-207ENST00000368226 C3orf36Q3SXR2 165 aa10.78□□□□□ -0.68
PTPRK-207ENST00000368226 RTN4RL2Q86UN3 420 aa10.78□□□□□ -0.68
PTPRK-207ENST00000368226 CD55P08174 381 aa10.78□□□□□ -0.68
PTPRK-207ENST00000368226 FAM71F2Q6NXP2 309 aa10.78□□□□□ -0.68
PTPRK-207ENST00000368226 ZNF418Q8TF45 676 aaPredicted RBP10.78□□□□□ -0.68
PTPRK-207ENST00000368226 RCC1LQ96I51 464 aaKnown RBP10.78□□□□□ -0.68
PTPRK-207ENST00000368226 MRPS18CQ9Y3D5 142 aaKnown RBP10.78□□□□□ -0.68
PTPRK-207ENST00000368226 THADAQ6YHU6 1953 aa10.78□□□□□ -0.68
PTPRK-207ENST00000368226 NBR2O15453 112 aa10.78□□□□□ -0.68
PTPRK-207ENST00000368226 HLA-DQA1P01909 254 aa10.78□□□□□ -0.68
PTPRK-207ENST00000368226 NR2C2APQ86WQ0 139 aa10.78□□□□□ -0.68
PTPRK-207ENST00000368226 DOCK4Q8N1I0 1966 aa10.78□□□□□ -0.68
PTPRK-207ENST00000368226 RPS20P60866 119 aaKnown RBP10.78□□□□□ -0.68
PTPRK-207ENST00000368226 OR1P1Q8NH06 330 aa10.78□□□□□ -0.68
PTPRK-207ENST00000368226 HIST1H4GQ99525 98 aa10.78□□□□□ -0.68
PTPRK-207ENST00000368226 BEX4Q9NWD9 120 aaPredicted RBP10.78□□□□□ -0.68
PTPRK-207ENST00000368226 LY6HO94772 140 aa10.77□□□□□ -0.68
PTPRK-207ENST00000368226 LYPD3O95274 346 aa10.77□□□□□ -0.68
PTPRK-207ENST00000368226 RPLP1P05386 114 aaKnown RBP10.77□□□□□ -0.68
PTPRK-207ENST00000368226 SUMO2P61956 95 aaKnown RBP10.77□□□□□ -0.68
PTPRK-207ENST00000368226 E9PLN8 166 aa10.77□□□□□ -0.69
PTPRK-207ENST00000368226 OR52E5Q8NH55 327 aa10.77□□□□□ -0.69
PTPRK-207ENST00000368226 IMMP2LQ96T52 175 aa10.77□□□□□ -0.69
PTPRK-207ENST00000368226 VKORC1Q9BQB6 163 aa10.77□□□□□ -0.69
PTPRK-207ENST00000368226 GEMIN7Q9H840 131 aaKnown RBP10.77□□□□□ -0.69
PTPRK-207ENST00000368226 A0A0G2JLM5 398 aa10.77□□□□□ -0.69
PTPRK-207ENST00000368226 NUTF2P61970 127 aaKnown RBP10.77□□□□□ -0.69
PTPRK-207ENST00000368226 GGNQ86UU5 652 aa10.77□□□□□ -0.69
PTPRK-207ENST00000368226 ATG101Q9BSB4 218 aa10.77□□□□□ -0.69
PTPRK-207ENST00000368226 IGKV3D-20A0A0C4DH25 116 aa10.77□□□□□ -0.69
PTPRK-207ENST00000368226 TIMM23O14925 209 aa10.77□□□□□ -0.69
PTPRK-207ENST00000368226 TRGC1P0CF51 173 aa10.77□□□□□ -0.69
PTPRK-207ENST00000368226 MEF2CQ06413 473 aaPredicted RBP10.77□□□□□ -0.69
PTPRK-207ENST00000368226 TMEM133Q9H2Q1 129 aa10.77□□□□□ -0.69
PTPRK-207ENST00000368226 IGFBP3P17936 291 aaPredicted RBP10.76□□□□□ -0.69
PTPRK-207ENST00000368226 MST1P26927 711 aa10.76□□□□□ -0.69
PTPRK-207ENST00000368226 NRN1LQ496H8 165 aa10.76□□□□□ -0.69
PTPRK-207ENST00000368226 GATAD1Q8WUU5 269 aa10.76□□□□□ -0.69
PTPRK-207ENST00000368226 MORN2Q502X0 79 aa10.76□□□□□ -0.69
PTPRK-207ENST00000368226 C5orf24Q7Z6I8 188 aa10.76□□□□□ -0.69
PTPRK-207ENST00000368226 TMEM160Q9NX00 188 aa10.76□□□□□ -0.69
PTPRK-207ENST00000368226 CDC42EP3Q9UKI2 254 aa10.76□□□□□ -0.69
PTPRK-207ENST00000368226 MT-ND6P03923 174 aa10.76□□□□□ -0.69
PTPRK-207ENST00000368226 CD33P20138 364 aa10.76□□□□□ -0.69
PTPRK-207ENST00000368226 ASIPP42127 132 aa10.76□□□□□ -0.69
PTPRK-207ENST00000368226 KIR2DL4Q99706 377 aa10.76□□□□□ -0.69
PTPRK-207ENST00000368226 BRD3OSQ6XYD6 125 aa10.76□□□□□ -0.69
PTPRK-207ENST00000368226 OR10S1Q8NGN2 331 aa10.76□□□□□ -0.69
PTPRK-207ENST00000368226 A0A0A6YYD4 124 aa10.76□□□□□ -0.69
PTPRK-207ENST00000368226 UNQ6494/PRO21346Q6UXR6 183 aa10.76□□□□□ -0.69
PTPRK-207ENST00000368226 OR13C6PQ8NH95 151 aa10.76□□□□□ -0.69
PTPRK-207ENST00000368226 SMDT1Q9H4I9 107 aa10.76□□□□□ -0.69
PTPRK-207ENST00000368226 SOD3P08294 240 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 RAB9AP51151 201 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 PKIAP61925 76 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 Q9H3A6 140 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 TNFRSF18Q9Y5U5 241 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 TRGV2A0A075B6R0 118 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 ZNF672Q499Z4 452 aaPredicted RBP10.75□□□□□ -0.69
PTPRK-207ENST00000368226 ZNF385CQ66K41 422 aaPredicted RBP10.75□□□□□ -0.69
PTPRK-207ENST00000368226 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.75□□□□□ -0.69
PTPRK-207ENST00000368226 OR10W1Q8NGF6 305 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 TXNDC17Q9BRA2 123 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 ALPK2Q86TB3 2170 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 A0A0G2JNJ9 132 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 TCRBV4S1A1TA0A5B7 111 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 PEX7O00628 323 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 LDLRAD4O15165 306 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 MLNRO43193 412 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 ZNF497Q6ZNH5 498 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 TCF24Q7RTU0 167 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 Q9UFV3 132 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 SDK2Q58EX2 2172 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 IGKV1D-8A0A087WSZ0 117 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 NPIPB7O75200 414 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 UCP1P25874 307 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 RHOGP84095 191 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 LDLRAD2Q5SZI1 272 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 VMO1Q7Z5L0 202 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 METRNQ9UJH8 293 aa10.75□□□□□ -0.69
PTPRK-207ENST00000368226 SNAI2O43623 268 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 PRR31Q5SQ13 230 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 TMEM170BQ5T4T1 132 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 NPFFR1Q9GZQ6 430 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 PRR30Q53SZ7 412 aaPredicted RBP10.74□□□□□ -0.69
PTPRK-207ENST00000368226 DEFB104AQ8WTQ1 72 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 C19orf24Q9BVV8 132 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 NEUROG3Q9Y4Z2 214 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 C5orf63A6NC05 138 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 OR9G9P0C7N8 305 aa10.74□□□□□ -0.69
PTPRK-207ENST00000368226 SMIM6P0DI80 62 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms