RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 TRAV12-1A0A0B4J245 112 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 SNAI2O43623 268 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 SLC25A20O43772 301 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 NAPSAO96009 420 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 BVES-AS1Q5T3Y7 98 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 C16orf92Q96LL3 132 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 IGKV3D-15A0A087WSY6 115 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 PRSS1P07477 247 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 LCN12Q6JVE5 192 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 RASL11BQ9BPW5 248 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 ZNF835Q9Y2P0 537 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 NBEAP1P0C6P0 100 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 COX8AP10176 69 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 GDF1P27539 372 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 RTP3Q9BQQ7 232 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 RHOHQ15669 191 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 ALKBH6Q3KRA9 238 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 METRNQ9UJH8 293 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 CTLA4P16410 223 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 EMP1P54849 157 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 C1orf122Q6ZSJ8 110 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 ELSPBP1Q96BH3 223 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 C14orf144Q96I85 54 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 PTPRZ1P23471 2315 aaPredicted RBP3.17□□□□□ -1.9
SYNE1-207ENST00000367255 WDR25Q64LD2 544 aaPredicted RBP3.17□□□□□ -1.9
SYNE1-207ENST00000367255 AKAP11Q9UKA4 1901 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 VSIG8P0DPA2 414 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 TMEM14EPQ6UXP3 125 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 FOXB1Q99853 325 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 SNRPD3P62318 126 aaKnown RBP3.17□□□□□ -1.9
SYNE1-207ENST00000367255 LY6G5CQ5SRR4 150 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 CEACAM16Q2WEN9 425 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 DEFB118Q96PH6 123 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 PAM16Q9Y3D7 125 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 FCMRO60667 390 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 SHISA7A6NL88 538 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 TMEM108Q6UXF1 575 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 N4BP2Q86UW6 1770 aaPredicted RBP3.17□□□□□ -1.9
SYNE1-207ENST00000367255 B5MCH6 92 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 NTF4P34130 210 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 TIMP3P35625 211 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 C16orf52Q8NHV5 167 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 GZMBP10144 247 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 COL9A1P20849 921 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 CBLN3Q6UW01 205 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 CTSBP07858 339 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 NUP35Q8NFH5 326 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 CXXC4Q9H2H0 198 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 TP73-AS1Q9UF72 201 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 PSG2P11465 335 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 ZNF493Q6ZR52 646 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 SLC25A22Q9H936 323 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 LINC00312Q9Y6C7 94 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 NEUROG3Q9Y4Z2 214 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 RBMY1BA6NDE4 496 aaKnown RBP3.17□□□□□ -1.9
SYNE1-207ENST00000367255 RBMY1EA6NEQ0 496 aaKnown RBP3.17□□□□□ -1.9
SYNE1-207ENST00000367255 RBMY1DP0C7P1 496 aaKnown RBP3.17□□□□□ -1.9
SYNE1-207ENST00000367255 RBMY1A1P0DJD3 496 aaKnown RBP3.17□□□□□ -1.9
SYNE1-207ENST00000367255 RBMY1CP0DJD4 496 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 FGF8P55075 233 aaPredicted RBP3.17□□□□□ -1.9
SYNE1-207ENST00000367255 ZNF474Q6S9Z5 364 aaPredicted RBP3.17□□□□□ -1.9
SYNE1-207ENST00000367255 TEX48A0A1B0GUV7 120 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 ZNF121P58317 390 aaPredicted RBP3.17□□□□□ -1.9
SYNE1-207ENST00000367255 OR2H1Q9GZK4 316 aa3.17□□□□□ -1.9
SYNE1-207ENST00000367255 AHRRA9YTQ3 701 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 ZNF77Q15935 545 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 KIR3DL3Q8N743 410 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 MYO5AQ9Y4I1 1855 aaKnown RBP3.16□□□□□ -1.9
SYNE1-207ENST00000367255 ZNF708P17019 499 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 C9orf118A6NHY6 69 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 GPX1P07203 203 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 HERV-K104P63124 156 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 LRRC75A-AS1Q8N1F1 130 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 SLC37A2Q8TED4 501 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 MED14OSP0DP75 135 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 MISP3Q96FF7 219 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 ERRFI1Q9UJM3 462 aaPredicted RBP3.16□□□□□ -1.9
SYNE1-207ENST00000367255 CCL3L1P16619 93 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 PTCRAQ6ISU1 281 aaPredicted RBP3.16□□□□□ -1.9
SYNE1-207ENST00000367255 WFDC6Q9BQY6 131 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 GNB4Q9HAV0 340 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 PILRBQ9UKJ0 227 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 SS18L1O75177 396 aaPredicted RBP3.16□□□□□ -1.9
SYNE1-207ENST00000367255 RNF208Q9H0X6 261 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 SRP19P09132 144 aaKnown RBP3.16□□□□□ -1.9
SYNE1-207ENST00000367255 FOXE3Q13461 319 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 SIRT4Q9Y6E7 314 aaPredicted RBP3.16□□□□□ -1.9
SYNE1-207ENST00000367255 hDV102S1A0JD36 115 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 FFAR1O14842 300 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 TM4SF4P48230 202 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 MCRIP2Q9BUT9 160 aaKnown RBP3.16□□□□□ -1.9
SYNE1-207ENST00000367255 NHSL1Q5SYE7 1610 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 TRAV14DV4A0A0A6YYC5 116 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 OVOL1O14753 267 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 MEOX1P50221 254 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 INSM2Q96T92 566 aaPredicted RBP3.16□□□□□ -1.9
SYNE1-207ENST00000367255 ZAR1Q86SH2 424 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 M0R381 172 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 IAPPP10997 89 aa3.16□□□□□ -1.9
SYNE1-207ENST00000367255 TMEM78Q5T7P6 136 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms