RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 GBGT1Q8N5D6 347 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 TTC9CQ8N5M4 171 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 TMEM126AQ9H061 195 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 NEU3Q9UQ49 428 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 ZNF407Q9C0G0 2248 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 FAM186AA6NE01 2351 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 K7EP13 123 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 TCF15Q12870 199 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 MORN3Q6PF18 240 aaPredicted RBP7.36□□□□□ -1.23
SYNE1-206ENST00000367253 ZNF664Q8N3J9 261 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 LSM10Q969L4 123 aaKnown RBP7.36□□□□□ -1.23
SYNE1-206ENST00000367253 MRPL18Q9H0U6 180 aaKnown RBP7.36□□□□□ -1.23
SYNE1-206ENST00000367253 NXT2Q9NPJ8 142 aaKnown RBP7.36□□□□□ -1.23
SYNE1-206ENST00000367253 TET1Q8NFU7 2136 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 A8MWP6 167 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 RNF223E7ERA6 249 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 SERF2P84101 59 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 ETDBQ3ZM63 59 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 WDR38Q5JTN6 314 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 C1orf194Q5T5A4 169 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 BHLHA9Q7RTU4 235 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 PEX11BO96011 259 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 SIRPDQ9H106 197 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 V9GYH0 126 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 UNC13CQ8NB66 2214 aa7.36□□□□□ -1.23
SYNE1-206ENST00000367253 A0A1W2PR77 199 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 SLC25A1P53007 311 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 OR10J3Q5JRS4 329 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 PRSS33Q8NF86 280 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 GPR146Q96CH1 333 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 ST20Q9HBF5 79 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 C7orf66A4D0T2 115 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 OR11H12B2RN74 326 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 PITX3O75364 302 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 CTLA4P16410 223 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 PAPPA-AS1Q5QFB9 102 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 OR11H1Q8NG94 326 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 OR11H2Q8NH07 326 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 UCN2Q96RP3 112 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 TRAV2A0A0B4J234 112 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 CKS2P33552 79 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 HIST1H4AP62805 103 aaKnown RBP7.35□□□□□ -1.23
SYNE1-206ENST00000367253 IFITM3Q01628 133 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 BSPH1Q075Z2 132 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 SPINK9Q5DT21 86 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 RFLNBQ8N5W9 214 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 PTH2Q96A98 100 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 MRGPRFQ96AM1 343 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 UPK1AO00322 258 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 TNFSF13O75888 250 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 TIMP3P35625 211 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 HIST1H2BLQ99880 126 aa7.35□□□□□ -1.23
SYNE1-206ENST00000367253 WNK1Q9H4A3 2382 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 GCM2O75603 506 aaPredicted RBP7.34□□□□□ -1.23
SYNE1-206ENST00000367253 ASAH2BP0C7U1 165 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 CR1LQ2VPA4 569 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 VSTM2LQ96N03 204 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 PLA2G10O15496 165 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 EFEMP2O95967 443 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 SEC11AP67812 179 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 FAM27E3Q08E93 113 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 IBA57Q5T440 356 aaKnown RBP7.34□□□□□ -1.23
SYNE1-206ENST00000367253 CDCP2Q5VXM1 449 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 C10orf113Q5VZT2 155 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 LCN12Q6JVE5 192 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 OR9G4Q8NGQ1 327 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 TRBV5-4A0A0C4DH59 114 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 SHISA8B8ZZ34 492 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 ANOS1P23352 680 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 GATA4P43694 442 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 PSMG4Q5JS54 123 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 ABHD12Q8N2K0 398 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 GVQW1Q8N7I0 195 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 TRBV9A0A0B4J1U6 114 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 SRIP30626 198 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 PSG3Q16557 428 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 PRELID3AQ96N28 172 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 MS4A6AQ9H2W1 248 aa7.34□□□□□ -1.23
SYNE1-206ENST00000367253 WDR81Q562E7 1941 aa7.34□□□□□ -1.24
SYNE1-206ENST00000367253 DEFB108AA8MXU0 73 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 TMEM50AO95807 157 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 AMY1AP04745 511 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 PGFP49763 221 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 INSL4Q14641 139 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 SRSF7Q16629 238 aaKnown RBP eCLIP7.33□□□□□ -1.24
SYNE1-206ENST00000367253 GPR27Q9NS67 375 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 LCTP09848 1927 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 LRRC37A2A6NM11 1700 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 CELA3BP08861 270 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 RPL8P62917 257 aaKnown RBP7.33□□□□□ -1.24
SYNE1-206ENST00000367253 C2orf83Q53S99 150 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 OTPQ5XKR4 325 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 PDFQ9HBH1 243 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 A0A0U1RQV5 110 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 A8MXK9 166 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 TGFBR3LH3BV60 316 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 TEPPQ6URK8 271 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 ACP7Q6ZNF0 438 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 LINC01587Q99440 93 aa7.33□□□□□ -1.24
SYNE1-206ENST00000367253 KCNE3Q9Y6H6 103 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms