RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 FOXJ2Q9P0K8 574 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 IGKV1-9A0A0C4DH69 117 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 LOC107984156A0A0G2JMH3 177 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 E9PQ18 207 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 LILRA1O75019 489 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 CGB7P0DN87 165 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 CEACAM1P13688 526 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 CD33P20138 364 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 CRYGSP22914 178 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 COTL1Q14019 142 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 ARTNQ5T4W7 220 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 ARL17AQ8IVW1 177 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 IFI27L2Q9H2X8 130 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 PAPPA-AS1Q5QFB9 102 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 OR4D5Q8NGN0 318 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 RNASEH2CQ8TDP1 164 aaKnown RBP7.6□□□□□ -1.19
SYNE1-205ENST00000367251 WBP1Q96G27 269 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 SBF1O95248 1867 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 FBLL1A6NHQ2 334 aaKnown RBP7.6□□□□□ -1.19
SYNE1-205ENST00000367251 HOXA5P20719 270 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 KIR2DL4Q99706 377 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 SEMA5BQ9P283 1151 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 SLC25A20O43772 301 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 LEPROTL1O95214 131 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 CA2P00918 260 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 CRYBB3P26998 211 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 LHX2P50458 406 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 ID3Q02535 119 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 SIGLEC12Q96PQ1 595 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 CKAP5Q14008 2032 aa7.6□□□□□ -1.19
SYNE1-205ENST00000367251 KBTBD11-OT1A0A1B0GTJ5 212 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 YPEL1O60688 119 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 CLPSP04118 112 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 TNFSF10P50591 281 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 ZNF497Q6ZNH5 498 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 YPEL2Q96QA6 119 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 KLK15Q9H2R5 256 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 TMEM242Q9NWH2 141 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 RALYQ9UKM9 306 aaKnown RBP7.59□□□□□ -1.19
SYNE1-205ENST00000367251 ZNF688P0C7X2 276 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 NMUP48645 174 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 SAPCD1Q5SSQ6 148 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 ATP1A1-AS1Q5TC04 95 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 PRSS22Q9GZN4 317 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 LHBP01229 141 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 SSTR5P35346 364 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 IGHV3-49A0A0A0MS15 119 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 H7C1H1 209 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 MDKP21741 143 aaPredicted RBP7.59□□□□□ -1.19
SYNE1-205ENST00000367251 ZFP36L1Q07352 338 aaKnown RBP7.59□□□□□ -1.19
SYNE1-205ENST00000367251 TMEM177Q53S58 311 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 ERASQ7Z444 233 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 OR10S1Q8NGN2 331 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 OR9G4Q8NGQ1 327 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 IMMP2LQ96T52 175 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 TMEM70Q9BUB7 260 aa7.59□□□□□ -1.19
SYNE1-205ENST00000367251 ANOS1P23352 680 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 KIR3DL3Q8N743 410 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 MBD3L1Q8WWY6 194 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 ABHD17AQ96GS6 310 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 MAP1LC3AQ9H492 121 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 CECR9P0C854 216 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 MST1P26927 711 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 CKS2P33552 79 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 HBBP68871 147 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 CENPWQ5EE01 88 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 THSD7BQ9C0I4 1608 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 A0A0A6YYD4 124 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 IGHV2OR16-5A0A0B4J2B6 119 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 NPIPB11E5RHQ5 1161 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 ICAM4Q14773 271 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 OR10AG1Q8NH19 301 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 TRAV1-1A0A0B4J248 108 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 CD5P06127 495 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 CGB3P0DN86 165 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 SRIP30626 198 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 APOBEC3AP31941 199 aaPredicted RBP7.58□□□□□ -1.2
SYNE1-205ENST00000367251 CDKN1AP38936 164 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 FXYD3Q14802 87 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 FMC1Q96HJ9 113 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 GPHA2Q96T91 129 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 LINC00312Q9Y6C7 94 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 TRGV4A0A0C4DH28 118 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 C17orf98A8MV24 154 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 H0YIZ8 118 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 K7ERU9 68 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 HLA-DRB1P01911 266 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 ZNF324BQ6AW86 544 aaPredicted RBP7.58□□□□□ -1.2
SYNE1-205ENST00000367251 Q6AWC8 147 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 SLC25A34Q6PIV7 304 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 ASCL4Q6XD76 172 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 TCF24Q7RTU0 167 aa7.58□□□□□ -1.2
SYNE1-205ENST00000367251 AKIRIN1Q9H9L7 192 aaPredicted RBP7.58□□□□□ -1.2
SYNE1-205ENST00000367251 OR52E5Q8NH55 327 aa7.57□□□□□ -1.2
SYNE1-205ENST00000367251 NTN3O00634 580 aaPredicted RBP7.57□□□□□ -1.2
SYNE1-205ENST00000367251 GHRHP01286 108 aa7.57□□□□□ -1.2
SYNE1-205ENST00000367251 LYL1P12980 280 aa7.57□□□□□ -1.2
SYNE1-205ENST00000367251 BEX4Q9NWD9 120 aaPredicted RBP7.57□□□□□ -1.2
SYNE1-205ENST00000367251 TSC2P49815 1807 aa7.57□□□□□ -1.2
SYNE1-205ENST00000367251 IGHV1-2P23083 117 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms