RNA–Protein interactions for RNA: ENST00000367002.4

RD3-201, Transcript of retinal degeneration 3, GUCY2D regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RD3, Length 4,266 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RD3-201ENST00000367002 C12orf54Q6X4T0 127 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 MIR17HGQ75NE6 70 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 MBD3L1Q8WWY6 194 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 VOPP1Q96AW1 172 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 IGKV3D-15A0A087WSY6 115 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 C5orf52A6NGY3 159 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 MFAP4P55083 255 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 CTAG1AP78358 180 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 TMEM78Q5T7P6 136 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 SLC25A34Q6PIV7 304 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 PLXNA3P51805 1871 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 MGPP08493 103 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 RNF224P0DH78 156 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 COTL1Q14019 142 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 NMSQ5H8A3 153 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 GCSAMLQ5JQS6 135 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 DGAT2L7PQ6IED9 249 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 TMEM144Q7Z5S9 345 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 CLEC7AQ9BXN2 247 aa9.61□□□□□ -0.87
RD3-201ENST00000367002 THADAQ6YHU6 1953 aa9.6□□□□□ -0.87
RD3-201ENST00000367002 K7ERU9 68 aa9.6□□□□□ -0.87
RD3-201ENST00000367002 NTN3O00634 580 aaPredicted RBP9.6□□□□□ -0.87
RD3-201ENST00000367002 TMEM171Q8WVE6 324 aa9.6□□□□□ -0.87
RD3-201ENST00000367002 ZCCHC14Q8WYQ9 949 aaKnown RBP9.6□□□□□ -0.87
RD3-201ENST00000367002 WNT10AQ9GZT5 417 aa9.6□□□□□ -0.87
RD3-201ENST00000367002 NOTCH4Q99466 2003 aa9.6□□□□□ -0.87
RD3-201ENST00000367002 ZSWIM8A7E2V4 1837 aa9.6□□□□□ -0.87
RD3-201ENST00000367002 IGHV1-69-2A0A0G2JMI3 117 aa9.6□□□□□ -0.87
RD3-201ENST00000367002 IL4P05112 153 aa9.6□□□□□ -0.87
RD3-201ENST00000367002 WFDC3Q8IUB2 231 aa9.6□□□□□ -0.87
RD3-201ENST00000367002 RPP25LQ8N5L8 163 aaKnown RBP9.6□□□□□ -0.87
RD3-201ENST00000367002 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.6□□□□□ -0.87
RD3-201ENST00000367002 COL25A1Q9BXS0 654 aaPredicted RBP9.6□□□□□ -0.87
RD3-201ENST00000367002 RALYQ9UKM9 306 aaKnown RBP9.6□□□□□ -0.87
RD3-201ENST00000367002 WDR83OSQ9Y284 106 aa9.6□□□□□ -0.87
RD3-201ENST00000367002 TBL2Q9Y4P3 447 aaKnown RBP9.6□□□□□ -0.87
RD3-201ENST00000367002 WISP1O95388 367 aa9.6□□□□□ -0.87
RD3-201ENST00000367002 CXCL1P09341 107 aa9.6□□□□□ -0.87
RD3-201ENST00000367002 ZNF841Q6ZN19 808 aa9.6□□□□□ -0.87
RD3-201ENST00000367002 PNKDQ8N490 385 aa9.6□□□□□ -0.87
RD3-201ENST00000367002 RNF115Q9Y4L5 304 aa9.6□□□□□ -0.87
RD3-201ENST00000367002 YPEL1O60688 119 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 UQCRFS1P47985 274 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 MORN2Q502X0 79 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 UNQ5815/PRO19632Q6UWF5 114 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 TCF23Q7RTU1 214 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 YPEL2Q96QA6 119 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 TMEM106BQ9NUM4 274 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 PSPNO60542 156 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 HLA-DRB1P01911 266 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 BTF3P20290 206 aaKnown RBP9.59□□□□□ -0.87
RD3-201ENST00000367002 CACNG8Q8WXS5 425 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 DPF1Q92782 380 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 ZNF524Q96C55 264 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 KCNS1Q96KK3 526 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 AP5S1Q9NUS5 200 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 ACACBO00763 2458 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 CCL3L1P16619 93 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 DUTP33316 252 aaKnown RBP9.59□□□□□ -0.87
RD3-201ENST00000367002 HBBP68871 147 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 GFI1BQ5VTD9 330 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 TMEM42Q69YG0 159 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 FAM19A2Q8N3H0 131 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 ATG101Q9BSB4 218 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 FBXL15Q9H469 300 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 PTPRQQ9UMZ3 2332 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 TRBV24-1A0A075B6N3 115 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 OR4C46A6NHA9 309 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 TM4SF5O14894 197 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 FAM106CPP0CH98 169 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 ADCYAP1P18509 176 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 ZNF600Q6ZNG1 722 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 TMEM170AQ8WVE7 144 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 C14orf144Q96I85 54 aa9.59□□□□□ -0.87
RD3-201ENST00000367002 C2orf83Q53S99 150 aa9.58□□□□□ -0.88
RD3-201ENST00000367002 ZCCHC24Q8N2G6 241 aaKnown RBP9.58□□□□□ -0.88
RD3-201ENST00000367002 OR10AG1Q8NH19 301 aa9.58□□□□□ -0.88
RD3-201ENST00000367002 OCC1Q8TAD7 63 aa9.58□□□□□ -0.88
RD3-201ENST00000367002 MRPL20Q9BYC9 149 aaKnown RBP9.58□□□□□ -0.88
RD3-201ENST00000367002 SEMA5BQ9P283 1151 aa9.58□□□□□ -0.88
RD3-201ENST00000367002 AUP1Q9Y679 476 aa9.58□□□□□ -0.88
RD3-201ENST00000367002 GTF3C1Q12789 2109 aa9.58□□□□□ -0.88
RD3-201ENST00000367002 FNDC1Q4ZHG4 1894 aaPredicted RBP9.58□□□□□ -0.88
RD3-201ENST00000367002 PEX7O00628 323 aa9.58□□□□□ -0.88
RD3-201ENST00000367002 RBFOX2O43251 390 aaKnown RBP eCLIP9.58□□□□□ -0.88
RD3-201ENST00000367002 SERF1AO75920 110 aa9.58□□□□□ -0.88
RD3-201ENST00000367002 LIPFP07098 398 aa9.58□□□□□ -0.88
RD3-201ENST00000367002 RPL13AP40429 203 aaKnown RBP9.58□□□□□ -0.88
RD3-201ENST00000367002 LOXL3P58215 753 aa9.58□□□□□ -0.88
RD3-201ENST00000367002 HGFACQ04756 655 aa9.58□□□□□ -0.88
RD3-201ENST00000367002 FOXF2Q12947 444 aa9.58□□□□□ -0.88
RD3-201ENST00000367002 TBR1Q16650 682 aa9.58□□□□□ -0.88
RD3-201ENST00000367002 TMEM105Q8N8V8 129 aa9.58□□□□□ -0.88
RD3-201ENST00000367002 RNASE7Q9H1E1 156 aaKnown RBP9.58□□□□□ -0.88
RD3-201ENST00000367002 SAA2-SAA4A0A096LPE2 208 aa9.58□□□□□ -0.88
RD3-201ENST00000367002 IGKV1-5P01602 117 aa9.58□□□□□ -0.88
RD3-201ENST00000367002 SAA2P0DJI9 122 aaPredicted RBP9.58□□□□□ -0.88
RD3-201ENST00000367002 MBNL2Q5VZF2 373 aaKnown RBP9.58□□□□□ -0.88
RD3-201ENST00000367002 PET117Q6UWS5 81 aa9.58□□□□□ -0.88
RD3-201ENST00000367002 OR52E5Q8NH55 327 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms