RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 DRAM1Q8N682 238 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 STXBP6Q8NFX7 210 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 OR2K2Q8NGT1 345 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 ZNF837Q96EG3 531 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 ZNF414Q96IQ9 312 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 KIAA1549LQ6ZVL6 1849 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 PCNX1Q96RV3 2341 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 SAMD5Q5TGI4 173 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 SDF2L1Q9HCN8 221 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 TCF20Q9UGU0 1960 aaKnown RBP4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 IGKV1-12A0A0C4DH73 117 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 FAM90A9PA6NNJ1 464 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 EREGO14944 169 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 IGKV1D-12P01611 117 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 GFRA1P56159 465 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 Q6ZT83 130 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 COPS9Q8WXC6 57 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 SIGLEC12Q96PQ1 595 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 RAB9AP51151 201 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 CSRP2Q16527 193 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 COLCA1Q6ZS62 124 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 PPIAL4EA0A075B759 164 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 SP9P0CG40 484 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 PPIAL4FP0DN26 164 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 SEC11AP67812 179 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 LYG1Q8N1E2 194 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 ZNF524Q96C55 264 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 PPIAL4AQ9Y536 164 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 EML5Q05BV3 1969 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 AMBPP02760 352 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 HOXA4Q00056 320 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 GAGE13Q4V321 117 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 ZNF324BQ6AW86 544 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 DGAT2L7PQ6IED9 249 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 KLF14Q8TD94 323 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 PLPPR2Q96GM1 343 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 MUC4Q99102 2169 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 ITGB1BP1O14713 200 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 GFI1BQ5VTD9 330 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 UNQ5815/PRO19632Q6UWF5 114 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 CXorf67Q86X51 503 aaPredicted RBP4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 RFESDQ8TAC1 157 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 TMEM160Q9NX00 188 aa4.53□□□□□ -1.68
CDC42BPA-204ENST00000366767 IGKV1D-8A0A087WSZ0 117 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 TRAV1-1A0A0B4J248 108 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 CDCP2Q5VXM1 449 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 PEAR1Q5VY43 1037 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 CLDND2Q8NHS1 167 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 NEU1Q99519 415 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 SEBOXQ9HB31 216 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 MPV17P39210 176 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 ZNF83P51522 516 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 HBBP68871 147 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 MOB3BQ86TA1 216 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 ZNF525Q8N782 197 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 TNFRSF14Q92956 283 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 TRAV8-6A0A0B4J262 113 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 NPIPB11E5RHQ5 1161 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 TMEM50AO95807 157 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 NAPSAO96009 420 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 ARL14EPLP0DKL9 152 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 SSBP2P81877 361 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 KRTCAP3Q53RY4 240 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 PYY3Q5JQD4 70 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 CLEC2AQ6UVW9 174 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 ZNF497Q6ZNH5 498 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 ZNF788Q6ZQV5 615 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 FAM19A2Q8N3H0 131 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 PRR7Q8TB68 274 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 SPANXA1Q9NS26 97 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 AMMECR1Q9Y4X0 333 aaPredicted RBP4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 PRSS8Q16651 343 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 OCIAD2Q56VL3 154 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 OR52E5Q8NH55 327 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 ST20Q9HBF5 79 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 EP400Q96L91 3159 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 ZNF146Q15072 292 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 SPANXN1Q5VSR9 72 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 DEFB108BQ8NET1 73 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 SSC4DQ8WTU2 575 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 GEMIN7Q9H840 131 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 RNASE1P07998 156 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 SPINK8P0C7L1 97 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 IL15RAQ13261 267 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 FAM71F2Q6NXP2 309 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 CYP2G1PQ6ZSU1 146 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 PNKDQ8N490 385 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 ATP6V0BQ99437 205 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 PLXNB1O43157 2135 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 NMSQ5H8A3 153 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 OR10J3Q5JRS4 329 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 TCF23Q7RTU1 214 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 CST9LQ9H4G1 147 aa4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 NHP2Q9NX24 153 aaKnown RBP4.52□□□□□ -1.69
CDC42BPA-204ENST00000366767 IGKV1-27A0A075B6S5 117 aa4.51□□□□□ -1.69
CDC42BPA-204ENST00000366767 TRAV5A0A0B4J249 113 aa4.51□□□□□ -1.69
CDC42BPA-204ENST00000366767 C10orf142B7Z368 130 aa4.51□□□□□ -1.69
CDC42BPA-204ENST00000366767 FCGR2BP31994 310 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms