RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 TRBV6-6A0A0A6YYG2 114 aa10.15□□□□□ -0.78
CDC42BPA-203ENST00000366766 C19orf67A6NJJ6 358 aa10.15□□□□□ -0.78
CDC42BPA-203ENST00000366766 NBEAP1P0C6P0 100 aa10.15□□□□□ -0.78
CDC42BPA-203ENST00000366766 LHFPL1Q86WI0 220 aa10.15□□□□□ -0.78
CDC42BPA-203ENST00000366766 WFIKKN1Q96NZ8 548 aa10.15□□□□□ -0.78
CDC42BPA-203ENST00000366766 RNF126Q9BV68 326 aa10.15□□□□□ -0.78
CDC42BPA-203ENST00000366766 LINC00305Q7Z4B0 112 aa10.15□□□□□ -0.78
CDC42BPA-203ENST00000366766 NEUROG1Q92886 237 aa10.15□□□□□ -0.78
CDC42BPA-203ENST00000366766 ZNF257Q9Y2Q1 563 aa10.15□□□□□ -0.78
CDC42BPA-203ENST00000366766 DPRXA6NFQ7 191 aa10.15□□□□□ -0.78
CDC42BPA-203ENST00000366766 NPPCP23582 126 aa10.15□□□□□ -0.78
CDC42BPA-203ENST00000366766 NUDT3O95989 172 aa10.15□□□□□ -0.78
CDC42BPA-203ENST00000366766 ID3Q02535 119 aa10.15□□□□□ -0.78
CDC42BPA-203ENST00000366766 UNQ5815/PRO19632Q6UWF5 114 aa10.15□□□□□ -0.78
CDC42BPA-203ENST00000366766 ZNF525Q8N782 197 aa10.15□□□□□ -0.78
CDC42BPA-203ENST00000366766 PEX7O00628 323 aa10.15□□□□□ -0.79
CDC42BPA-203ENST00000366766 IL6RP08887 468 aaPredicted RBP10.15□□□□□ -0.79
CDC42BPA-203ENST00000366766 FCGR2BP31994 310 aaPredicted RBP10.15□□□□□ -0.79
CDC42BPA-203ENST00000366766 SEMA5BQ9P283 1151 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 A0A1W2PRE2 83 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 LDLRAD4O15165 306 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 RFPL3SP0C7P2 107 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 ACSF3Q4G176 576 aaPredicted RBP10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 VCX2Q9H322 139 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 PEF1Q9UBV8 284 aaKnown RBP10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 KCNS1Q96KK3 526 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 TMEM106BQ9NUM4 274 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 MYO9AB2RTY4 2548 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 PTPN13Q12923 2485 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 SRSF4Q08170 494 aaKnown RBP10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 SDF2L1Q9HCN8 221 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 RASL11AQ6T310 242 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 GPR61Q9BZJ8 451 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 CCL20P78556 96 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 RAB37Q96AX2 223 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 ZNF414Q96IQ9 312 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 HILPDAQ9Y5L2 63 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 LOC101059948A0A1B0GTJ6 334 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 OR4D5Q8NGN0 318 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 TMEM74BQ9NUR3 256 aa10.14□□□□□ -0.79
CDC42BPA-203ENST00000366766 MSGN1A6NI15 193 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 LTBRP36941 435 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 IL4P05112 153 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 ZFP36L1Q07352 338 aaKnown RBP10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 FAM57AQ8TBR7 257 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 TNRC6AQ8NDV7 1962 aaKnown RBP10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 PPBPP02775 128 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 PDLIM4P50479 330 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 PSG7Q13046 419 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 MBD3L1Q8WWY6 194 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 PGLYRP4Q96LB8 373 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 PVRIGQ6DKI7 326 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 ATP5L2Q7Z4Y8 100 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 ZNF256Q9Y2P7 627 aaPredicted RBP10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 CX3CL1P78423 397 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 FXYD3Q14802 87 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 C2orf83Q53S99 150 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 OSTCQ9NRP0 149 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 CD5P06127 495 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 CRYGSP22914 178 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 SRSF12Q8WXF0 261 aaKnown RBP10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 CUL9Q8IWT3 2517 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 UMODP07911 640 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 RAMP1O60894 148 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 NPIPB3Q92617 1050 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 IL17BQ9UHF5 180 aa10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 COLQQ9Y215 455 aaPredicted RBP10.13□□□□□ -0.79
CDC42BPA-203ENST00000366766 PAX1P15863 534 aa10.12□□□□□ -0.79
CDC42BPA-203ENST00000366766 RPP21Q9H633 154 aaKnown RBP10.12□□□□□ -0.79
CDC42BPA-203ENST00000366766 IGKV1D-43A0A0B4J1Z2 117 aa10.12□□□□□ -0.79
CDC42BPA-203ENST00000366766 IZUMO1RA6ND01 250 aa10.12□□□□□ -0.79
CDC42BPA-203ENST00000366766 GOLT1AQ6ZVE7 132 aa10.12□□□□□ -0.79
CDC42BPA-203ENST00000366766 SONP18583 2426 aaKnown RBP10.12□□□□□ -0.79
CDC42BPA-203ENST00000366766 GNB1LQ9BYB4 327 aa10.12□□□□□ -0.79
CDC42BPA-203ENST00000366766 FDCSPQ8NFU4 85 aa10.12□□□□□ -0.79
CDC42BPA-203ENST00000366766 IGKV1-9A0A0C4DH69 117 aa10.12□□□□□ -0.79
CDC42BPA-203ENST00000366766 KLRB1Q12918 225 aa10.12□□□□□ -0.79
CDC42BPA-203ENST00000366766 ADAMTS9Q9P2N4 1935 aa10.12□□□□□ -0.79
CDC42BPA-203ENST00000366766 DYSFO75923 2080 aa10.12□□□□□ -0.79
CDC42BPA-203ENST00000366766 OR4C46A6NHA9 309 aa10.12□□□□□ -0.79
CDC42BPA-203ENST00000366766 SGK494Q96LW2 274 aa10.12□□□□□ -0.79
CDC42BPA-203ENST00000366766 HOXA5P20719 270 aa10.12□□□□□ -0.79
CDC42BPA-203ENST00000366766 AUP1Q9Y679 476 aa10.12□□□□□ -0.79
CDC42BPA-203ENST00000366766 TRBV24-1A0A075B6N3 115 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 CBLN1P23435 193 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 RAX2Q96IS3 184 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 ZNRF1Q8ND25 227 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 DDB2Q92466 427 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 HIST1H4GQ99525 98 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 ZIC4Q8N9L1 334 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 UBE2CO00762 179 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 APELAP0DMC3 54 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 IL18BPO95998 194 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 ICAM4Q14773 271 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 MBNL2Q5VZF2 373 aaKnown RBP10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 ORMDL3Q8N138 153 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 ASCL2Q99929 193 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 FOXJ2Q9P0K8 574 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 ARHGAP21Q5T5U3 1957 aa10.11□□□□□ -0.79
CDC42BPA-203ENST00000366766 FOXL2P58012 376 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms