RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 FSCN3Q9NQT6 498 aa9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 DYSFO75923 2080 aa9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 C15orf61A6NNL5 157 aa9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 RFPL3SP0C7P2 107 aa9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 PPP1R17O96001 155 aa9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 RBPMS2Q6ZRY4 209 aaKnown RBP9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 F2RL2O00254 374 aa9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 LHX2P50458 406 aa9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 C2CD3Q4AC94 2353 aa9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 ZNF137PP52743 207 aa9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 OR10J3Q5JRS4 329 aa9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 PIEZO1Q92508 2521 aa9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 A0A1B0GUT8 65 aa9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 CEBPDP49716 269 aaPredicted RBP9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 MEF2CQ06413 473 aaPredicted RBP9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 TMEM14EPQ6UXP3 125 aa9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 COL4A4P53420 1690 aaPredicted RBP9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 SLC25A17O43808 307 aa9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 ATP5L2Q7Z4Y8 100 aa9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 CIARTQ8N365 385 aaPredicted RBP9.93□□□□□ -0.82
CDC42BPA-202ENST00000366764 NUP210LQ5VU65 1888 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 MNX1P50219 401 aaPredicted RBP9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 CTAG1AP78358 180 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 PGPA6NDG6 321 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 SOD3P08294 240 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 FOXL2NBQ6ZUU3 175 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 ABHD12Q8N2K0 398 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 CDCP2Q5VXM1 449 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 SONP18583 2426 aaKnown RBP9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 HINT1P49773 126 aaPredicted RBP9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 TWIST1Q15672 202 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 TIMP3P35625 211 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 SMAGPQ0VAQ4 97 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 LINC01559Q495D7 138 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 WDR83OSQ9Y284 106 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 ZNF257Q9Y2Q1 563 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 SPINK2P20155 84 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 SRSF9Q13242 221 aaKnown RBP eCLIP9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 RTP5Q14D33 572 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 TEX38Q6PEX7 206 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 METTL26Q96S19 204 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 C2orf88Q9BSF0 95 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 CLEC7AQ9BXN2 247 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 RPP21Q9H633 154 aaKnown RBP9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 LINC00312Q9Y6C7 94 aa9.92□□□□□ -0.82
CDC42BPA-202ENST00000366764 A0A1W2PPE3 182 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 TMEM78Q5T7P6 136 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 OPN3Q9H1Y3 402 aaPredicted RBP9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 CLDN16Q9Y5I7 305 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 UMODP07911 640 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 ZNF837Q96EG3 531 aaPredicted RBP9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 CCL8P80075 99 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 FXYD3Q14802 87 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 ZFHX2Q9C0A1 2572 aaPredicted RBP9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 ADCYAP1P18509 176 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 ZNF324O75467 553 aaPredicted RBP9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 AMBPP02760 352 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 PGLYRP4Q96LB8 373 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 SCO2A0A1W2PP80 73 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 PATE3B3GLJ2 98 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 SERF1AO75920 110 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 NRN1Q9NPD7 142 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 SORL1Q92673 2214 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 TCTAP57738 103 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 RELBQ01201 579 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 VKORC1L1Q8N0U8 176 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 ZDHHC16Q969W1 377 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 MFAP4P55083 255 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 ELOVL5Q9NYP7 299 aa9.91□□□□□ -0.82
CDC42BPA-202ENST00000366764 CECR9P0C854 216 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 ZNF414Q96IQ9 312 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 GPR82Q96P67 336 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 ACTL10Q5JWF8 245 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 ZIC4Q8N9L1 334 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 F5H697 171 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 SMIM12Q96EX1 92 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 ST20Q9HBF5 79 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 SPANXN1Q5VSR9 72 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 DEFB124Q8NES8 71 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 FNDC10F2Z333 226 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 NBEAP1P0C6P0 100 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 REG1BP48304 166 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 SPEM2Q0P670 501 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 PSG7Q13046 419 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 NMUP48645 174 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 RPL39P5Q59GN2 51 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 ZNF788Q6ZQV5 615 aa9.9□□□□□ -0.82
CDC42BPA-202ENST00000366764 CGAP01215 116 aa9.9□□□□□ -0.83
CDC42BPA-202ENST00000366764 MTURNQ8N3F0 131 aa9.9□□□□□ -0.83
CDC42BPA-202ENST00000366764 PNKDQ8N490 385 aa9.9□□□□□ -0.83
CDC42BPA-202ENST00000366764 R4GN57 208 aa9.9□□□□□ -0.83
CDC42BPA-202ENST00000366764 ATG2AQ2TAZ0 1938 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 RAMP3O60896 148 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 LINC00305Q7Z4B0 112 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 FOXJ2Q9P0K8 574 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 IGKV1-27A0A075B6S5 117 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 TRAV9-2A0A087WT02 112 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 IGHV2OR16-5A0A0B4J2B6 119 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 FAM106CPP0CH98 169 aa9.89□□□□□ -0.83
CDC42BPA-202ENST00000366764 PRR7Q8TB68 274 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms