RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 FAM222BQ8WU58 562 aa12.73□□□□□ -0.37
CNKSR1-201ENST00000361530 CCL13Q99616 98 aa12.73□□□□□ -0.37
CNKSR1-201ENST00000361530 OR51B2Q9Y5P1 312 aa12.73□□□□□ -0.37
CNKSR1-201ENST00000361530 YLPM1P49750 1951 aaKnown RBP12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 SRRM4A7MD48 611 aaKnown RBP12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 SLC17A3O00476 420 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 ACTL6BO94805 426 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 IGKV1-16P04430 117 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 LINC00869P0C866 280 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 RHOBP62745 196 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 PRR20EP86478 221 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 PRR20CP86479 221 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 PRR20DP86480 221 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 PRR20BP86481 221 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 PRR20AP86496 221 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 MIR17HGQ75NE6 70 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 FAM216BQ8N7L0 139 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 OR10G8Q8NGN5 311 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 RNF7Q9UBF6 113 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 TRGV10A0A0A0MS01 117 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 STUMQ69YW2 141 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 GAFA1Q96PS6 74 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 ENY2Q9NPA8 101 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 PAM16Q9Y3D7 125 aa12.72□□□□□ -0.37
CNKSR1-201ENST00000361530 RPLP1P05386 114 aaKnown RBP12.71□□□□□ -0.37
CNKSR1-201ENST00000361530 CBLN1P23435 193 aa12.71□□□□□ -0.37
CNKSR1-201ENST00000361530 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.71□□□□□ -0.37
CNKSR1-201ENST00000361530 NEUROG1Q92886 237 aa12.71□□□□□ -0.37
CNKSR1-201ENST00000361530 BTF3L4Q96K17 158 aa12.71□□□□□ -0.37
CNKSR1-201ENST00000361530 TMEM106BQ9NUM4 274 aa12.71□□□□□ -0.37
CNKSR1-201ENST00000361530 MAP1BP46821 2468 aaKnown RBP12.71□□□□□ -0.38
CNKSR1-201ENST00000361530 IGKV1OR2-108A0A075B7D4 117 aa12.71□□□□□ -0.38
CNKSR1-201ENST00000361530 IGHV1-46P01743 117 aa12.71□□□□□ -0.38
CNKSR1-201ENST00000361530 GATA4P43694 442 aa12.71□□□□□ -0.38
CNKSR1-201ENST00000361530 MLANAQ16655 118 aa12.71□□□□□ -0.38
CNKSR1-201ENST00000361530 TANC2Q9HCD6 1990 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 CEP250Q9BV73 2442 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 FRMD6-AS1P0C7T7 363 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 CT45A6P0DMU7 189 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 CT45A5P0DMU8 189 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 CT45A7P0DMV0 189 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 IRF2P14316 349 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 GATA2P23769 480 aaPredicted RBP12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 TPPP2P59282 170 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 TNFAIP6P98066 277 aaPredicted RBP12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 ZNF90Q03938 601 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 DMRTA1Q5VZB9 504 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 Q6ZWC4 215 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 HSPB9Q9BQS6 159 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 LRFN3Q9BTN0 628 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 RAI1Q7Z5J4 1906 aaPredicted RBP12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 J3QR06 171 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 CEACAM4O75871 244 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 FAM27E3Q08E93 113 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 GAGE1Q13065 139 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 RAB31Q13636 194 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 POU2AF1Q16633 256 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 ZADH2Q8N4Q0 377 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 SLC45A2Q9UMX9 530 aa12.7□□□□□ -0.38
CNKSR1-201ENST00000361530 YPEL3P61236 119 aaPredicted RBP12.69□□□□□ -0.38
CNKSR1-201ENST00000361530 VN1R17PQ8TDU5 208 aa12.69□□□□□ -0.38
CNKSR1-201ENST00000361530 C11orf52Q96A22 123 aa12.69□□□□□ -0.38
CNKSR1-201ENST00000361530 M0QZK8 103 aa12.69□□□□□ -0.38
CNKSR1-201ENST00000361530 CIDEAO60543 219 aa12.69□□□□□ -0.38
CNKSR1-201ENST00000361530 OR5I1Q13606 314 aa12.69□□□□□ -0.38
CNKSR1-201ENST00000361530 BAGE3Q86Y29 109 aa12.69□□□□□ -0.38
CNKSR1-201ENST00000361530 BAGE2Q86Y30 109 aa12.69□□□□□ -0.38
CNKSR1-201ENST00000361530 ADTRPQ96IZ2 230 aa12.69□□□□□ -0.38
CNKSR1-201ENST00000361530 ROS1P08922 2347 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 UPK2O00526 184 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 SERF1AO75920 110 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 CRISP2P16562 243 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 CDKN1AP38936 164 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 PSG5Q15238 335 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 ZNF788Q6ZQV5 615 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 RND1Q92730 232 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 EAF1Q96JC9 268 aaPredicted RBP12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 NABP2Q9BQ15 211 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 SAMD10Q9BYL1 202 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 TEX50A0A1B0GTY4 177 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 PRCDQ00LT1 54 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 ZNF503Q96F45 646 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 MIEN1Q9BRT3 115 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 PLEKHA3Q9HB20 300 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 IL36BQ9NZH7 164 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 IL19Q9UHD0 177 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 SH3BGRL2Q9UJC5 107 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 PRNDQ9UKY0 176 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 TP53TG3Q9ULZ0 132 aa12.68□□□□□ -0.38
CNKSR1-201ENST00000361530 ARFGEF3Q5TH69 2177 aa12.67□□□□□ -0.38
CNKSR1-201ENST00000361530 SLC25A48Q6ZT89 311 aaKnown RBP12.67□□□□□ -0.38
CNKSR1-201ENST00000361530 OR10W1Q8NGF6 305 aa12.67□□□□□ -0.38
CNKSR1-201ENST00000361530 VAMP8Q9BV40 100 aa12.67□□□□□ -0.38
CNKSR1-201ENST00000361530 MRPL18Q9H0U6 180 aaKnown RBP12.67□□□□□ -0.38
CNKSR1-201ENST00000361530 RAB9BQ9NP90 201 aa12.67□□□□□ -0.38
CNKSR1-201ENST00000361530 SLC35D1Q9NTN3 355 aa12.67□□□□□ -0.38
CNKSR1-201ENST00000361530 RPUSD1Q9UJJ7 312 aaKnown RBP12.67□□□□□ -0.38
CNKSR1-201ENST00000361530 CRYBB3P26998 211 aa12.67□□□□□ -0.38
CNKSR1-201ENST00000361530 RNASE8Q8TDE3 154 aaKnown RBP12.67□□□□□ -0.38
CNKSR1-201ENST00000361530 C22orf15Q8WYQ4 148 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms