RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 ZNF355PQ9NSJ1 428 aa10.78□□□□□ -0.68
NSMCE1-201ENST00000361439 THYN1Q9P016 225 aa10.78□□□□□ -0.68
NSMCE1-201ENST00000361439 C7orf66A4D0T2 115 aa10.77□□□□□ -0.69
NSMCE1-201ENST00000361439 MED6O75586 246 aa10.77□□□□□ -0.69
NSMCE1-201ENST00000361439 ADAP1O75689 374 aa10.77□□□□□ -0.69
NSMCE1-201ENST00000361439 TRGV3P03979 118 aa10.77□□□□□ -0.69
NSMCE1-201ENST00000361439 APELAP0DMC3 54 aa10.77□□□□□ -0.69
NSMCE1-201ENST00000361439 SUB1P53999 127 aaKnown RBP eCLIP10.77□□□□□ -0.69
NSMCE1-201ENST00000361439 ATP5IP56385 69 aaPredicted RBP10.77□□□□□ -0.69
NSMCE1-201ENST00000361439 RUNX1Q01196 453 aa10.77□□□□□ -0.69
NSMCE1-201ENST00000361439 C2orf68Q2NKX9 166 aa10.77□□□□□ -0.69
NSMCE1-201ENST00000361439 KLK15Q9H2R5 256 aa10.77□□□□□ -0.69
NSMCE1-201ENST00000361439 F11RQ9Y624 299 aaKnown RBP10.77□□□□□ -0.69
NSMCE1-201ENST00000361439 IGLV11-55A0A075B6I3 123 aa10.76□□□□□ -0.69
NSMCE1-201ENST00000361439 M0QZ24 198 aa10.76□□□□□ -0.69
NSMCE1-201ENST00000361439 SPNP16150 400 aa10.76□□□□□ -0.69
NSMCE1-201ENST00000361439 SNCAP37840 140 aa10.76□□□□□ -0.69
NSMCE1-201ENST00000361439 HOXA1P49639 335 aaPredicted RBP10.76□□□□□ -0.69
NSMCE1-201ENST00000361439 TPPP2P59282 170 aa10.76□□□□□ -0.69
NSMCE1-201ENST00000361439 SRSF4Q08170 494 aaKnown RBP10.76□□□□□ -0.69
NSMCE1-201ENST00000361439 TATDN3Q17R31 274 aa10.76□□□□□ -0.69
NSMCE1-201ENST00000361439 NOXA1Q86UR1 476 aa10.76□□□□□ -0.69
NSMCE1-201ENST00000361439 C11orf44Q8N8P7 122 aa10.76□□□□□ -0.69
NSMCE1-201ENST00000361439 C4orf3Q8WVX3 66 aa10.76□□□□□ -0.69
NSMCE1-201ENST00000361439 CIB3Q96Q77 187 aaPredicted RBP10.76□□□□□ -0.69
NSMCE1-201ENST00000361439 HIPK2Q9H2X6 1198 aa10.76□□□□□ -0.69
NSMCE1-201ENST00000361439 U3KQ87 197 aa10.76□□□□□ -0.69
NSMCE1-201ENST00000361439 C13orf42A0A1B0GVH6 325 aa10.75□□□□□ -0.69
NSMCE1-201ENST00000361439 CEBPZOSA8MTT3 80 aa10.75□□□□□ -0.69
NSMCE1-201ENST00000361439 ADARB2-AS1A8MUL3 147 aa10.75□□□□□ -0.69
NSMCE1-201ENST00000361439 HTR2BP41595 481 aa10.75□□□□□ -0.69
NSMCE1-201ENST00000361439 RHOGP84095 191 aa10.75□□□□□ -0.69
NSMCE1-201ENST00000361439 ID3Q02535 119 aa10.75□□□□□ -0.69
NSMCE1-201ENST00000361439 IAH1Q2TAA2 248 aaPredicted RBP10.75□□□□□ -0.69
NSMCE1-201ENST00000361439 BSXQ3C1V8 233 aa10.75□□□□□ -0.69
NSMCE1-201ENST00000361439 KHDC1LQ5JSQ8 128 aa10.75□□□□□ -0.69
NSMCE1-201ENST00000361439 PVRIGQ6DKI7 326 aa10.75□□□□□ -0.69
NSMCE1-201ENST00000361439 UXS1Q8NBZ7 420 aa10.75□□□□□ -0.69
NSMCE1-201ENST00000361439 OR4F17Q8NGA8 305 aa10.75□□□□□ -0.69
NSMCE1-201ENST00000361439 OR4D5Q8NGN0 318 aa10.75□□□□□ -0.69
NSMCE1-201ENST00000361439 MS4A10Q96PG2 267 aa10.75□□□□□ -0.69
NSMCE1-201ENST00000361439 FANCD2OSQ96PS1 177 aa10.75□□□□□ -0.69
NSMCE1-201ENST00000361439 OR4F4Q96R69 305 aa10.75□□□□□ -0.69
NSMCE1-201ENST00000361439 ATP6V0BQ99437 205 aa10.75□□□□□ -0.69
NSMCE1-201ENST00000361439 CORTO00230 105 aa10.74□□□□□ -0.69
NSMCE1-201ENST00000361439 REG1AP05451 166 aa10.74□□□□□ -0.69
NSMCE1-201ENST00000361439 NKX2-1P43699 371 aaPredicted RBP10.74□□□□□ -0.69
NSMCE1-201ENST00000361439 ATP5G2Q06055 141 aa10.74□□□□□ -0.69
NSMCE1-201ENST00000361439 GSG1LQ6UXU4 331 aa10.74□□□□□ -0.69
NSMCE1-201ENST00000361439 VN1R17PQ8TDU5 208 aa10.74□□□□□ -0.69
NSMCE1-201ENST00000361439 DTD1Q8TEA8 209 aa10.74□□□□□ -0.69
NSMCE1-201ENST00000361439 OR10C1Q96KK4 312 aa10.74□□□□□ -0.69
NSMCE1-201ENST00000361439 CXorf58Q96LI9 332 aa10.74□□□□□ -0.69
NSMCE1-201ENST00000361439 P2RX4Q99571 388 aa10.74□□□□□ -0.69
NSMCE1-201ENST00000361439 HEYLQ9NQ87 328 aaPredicted RBP10.74□□□□□ -0.69
NSMCE1-201ENST00000361439 C5orf51A6NDU8 294 aa10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 MPTX1A8MV57 137 aa10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 I3L521 148 aa10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 SYNGR2O43760 224 aa10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 SSNA1O43805 119 aa10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 LGALS1P09382 135 aaKnown RBP10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 RPP30P78346 268 aaKnown RBP10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 CYCSP99999 105 aaKnown RBP10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 C15orf32Q32M92 178 aa10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 NSUN5P1Q3KNT7 163 aa10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 C2orf83Q53S99 150 aa10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 LCNL1Q6ZST4 164 aa10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 ZBTB8BQ8NAP8 495 aaPredicted RBP10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 KLHL30-AS1Q8NEE0 82 aa10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 C2orf50Q96LR7 162 aa10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 RBKSQ9H477 322 aa10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 FBXL7Q9UJT9 491 aa10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 TET2Q6N021 2002 aaPredicted RBP10.73□□□□□ -0.69
NSMCE1-201ENST00000361439 TRBV7-1A0A0A6YYK4 115 aa10.72□□□□□ -0.69
NSMCE1-201ENST00000361439 NUDT19A8MXV4 375 aa10.72□□□□□ -0.69
NSMCE1-201ENST00000361439 OR2J3O76001 311 aa10.72□□□□□ -0.69
NSMCE1-201ENST00000361439 PRH1P02810 166 aa10.72□□□□□ -0.69
NSMCE1-201ENST00000361439 EXOSC2Q13868 293 aaKnown RBP10.72□□□□□ -0.69
NSMCE1-201ENST00000361439 SPINK9Q5DT21 86 aa10.72□□□□□ -0.69
NSMCE1-201ENST00000361439 SLC25A24Q6NUK1 477 aa10.72□□□□□ -0.69
NSMCE1-201ENST00000361439 ZNF343Q6P1L6 599 aa10.72□□□□□ -0.69
NSMCE1-201ENST00000361439 SLC24A4Q8NFF2 622 aa10.72□□□□□ -0.69
NSMCE1-201ENST00000361439 RNASEH2CQ8TDP1 164 aaKnown RBP10.72□□□□□ -0.69
NSMCE1-201ENST00000361439 EEF1AKMT3Q96AZ1 226 aa10.72□□□□□ -0.69
NSMCE1-201ENST00000361439 DMRT1Q9Y5R6 373 aa10.72□□□□□ -0.69
NSMCE1-201ENST00000361439 FAM25EA8MYX2 175 aa10.71□□□□□ -0.69
NSMCE1-201ENST00000361439 WRBO00258 174 aa10.71□□□□□ -0.69
NSMCE1-201ENST00000361439 RNASE2P10153 161 aaKnown RBP10.71□□□□□ -0.69
NSMCE1-201ENST00000361439 MYCNOSP40205 109 aa10.71□□□□□ -0.69
NSMCE1-201ENST00000361439 IL15RAQ13261 267 aa10.71□□□□□ -0.69
NSMCE1-201ENST00000361439 RAB40CQ96S21 281 aa10.71□□□□□ -0.69
NSMCE1-201ENST00000361439 NMES1Q9C002 83 aa10.71□□□□□ -0.69
NSMCE1-201ENST00000361439 GNB4Q9HAV0 340 aa10.71□□□□□ -0.69
NSMCE1-201ENST00000361439 RANGRFQ9HD47 186 aaPredicted RBP10.71□□□□□ -0.69
NSMCE1-201ENST00000361439 GAR1Q9NY12 217 aaKnown RBP10.71□□□□□ -0.69
NSMCE1-201ENST00000361439 GSKIPQ9P0R6 139 aa10.71□□□□□ -0.69
NSMCE1-201ENST00000361439 ALG5Q9Y673 324 aa10.71□□□□□ -0.69
NSMCE1-201ENST00000361439 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.7□□□□□ -0.7
NSMCE1-201ENST00000361439 A0A1W2PRX2 142 aa10.7□□□□□ -0.7
NSMCE1-201ENST00000361439 CCSO14618 274 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms