RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 BRI3O95415 125 aa9.71□□□□□ -0.86
NIF3L1-201ENST00000359683 IGLV1-40P01703 118 aa9.71□□□□□ -0.86
NIF3L1-201ENST00000359683 IGHG4P01861 327 aa9.71□□□□□ -0.86
NIF3L1-201ENST00000359683 HOXA1P49639 335 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-201ENST00000359683 RAB32Q13637 225 aa9.71□□□□□ -0.86
NIF3L1-201ENST00000359683 KLK9Q2XQG4 91 aa9.71□□□□□ -0.86
NIF3L1-201ENST00000359683 ZNF329Q86UD4 541 aa9.71□□□□□ -0.86
NIF3L1-201ENST00000359683 DTD1Q8TEA8 209 aa9.71□□□□□ -0.86
NIF3L1-201ENST00000359683 ASB13Q8WXK3 278 aa9.71□□□□□ -0.86
NIF3L1-201ENST00000359683 HEYLQ9NQ87 328 aaPredicted RBP9.71□□□□□ -0.86
NIF3L1-201ENST00000359683 ZFP57Q9NU63 452 aa9.71□□□□□ -0.86
NIF3L1-201ENST00000359683 KLK9Q9UKQ9 250 aa9.71□□□□□ -0.86
NIF3L1-201ENST00000359683 FBXO24O75426 580 aa9.7□□□□□ -0.86
NIF3L1-201ENST00000359683 LY86O95711 162 aa9.7□□□□□ -0.86
NIF3L1-201ENST00000359683 SCGB1D2O95969 90 aa9.7□□□□□ -0.86
NIF3L1-201ENST00000359683 REG1AP05451 166 aa9.7□□□□□ -0.86
NIF3L1-201ENST00000359683 GIPP09681 153 aaPredicted RBP9.7□□□□□ -0.86
NIF3L1-201ENST00000359683 SLC35B1P78383 322 aa9.7□□□□□ -0.86
NIF3L1-201ENST00000359683 BSXQ3C1V8 233 aa9.7□□□□□ -0.86
NIF3L1-201ENST00000359683 C10orf99Q6UWK7 81 aa9.7□□□□□ -0.86
NIF3L1-201ENST00000359683 COMMD1Q8N668 190 aa9.7□□□□□ -0.86
NIF3L1-201ENST00000359683 ZNF114Q8NC26 417 aa9.7□□□□□ -0.86
NIF3L1-201ENST00000359683 PPP1R1CQ8WVI7 109 aa9.7□□□□□ -0.86
NIF3L1-201ENST00000359683 CIB3Q96Q77 187 aaPredicted RBP9.7□□□□□ -0.86
NIF3L1-201ENST00000359683 P2RX4Q99571 388 aa9.7□□□□□ -0.86
NIF3L1-201ENST00000359683 HIPK2Q9H2X6 1198 aa9.7□□□□□ -0.86
NIF3L1-201ENST00000359683 RCL1Q9Y2P8 373 aaKnown RBP9.7□□□□□ -0.86
NIF3L1-201ENST00000359683 hCG_2014768A0A024R1R8 64 aa9.69□□□□□ -0.86
NIF3L1-201ENST00000359683 H3BUA1 57 aa9.69□□□□□ -0.86
NIF3L1-201ENST00000359683 WRBO00258 174 aa9.69□□□□□ -0.86
NIF3L1-201ENST00000359683 RNASE2P10153 161 aaKnown RBP9.69□□□□□ -0.86
NIF3L1-201ENST00000359683 HTR2BP41595 481 aa9.69□□□□□ -0.86
NIF3L1-201ENST00000359683 BCAP31P51572 246 aa9.69□□□□□ -0.86
NIF3L1-201ENST00000359683 PAX9P55771 341 aa9.69□□□□□ -0.86
NIF3L1-201ENST00000359683 PVRIGQ6DKI7 326 aa9.69□□□□□ -0.86
NIF3L1-201ENST00000359683 C11orf87Q6NUJ2 197 aa9.69□□□□□ -0.86
NIF3L1-201ENST00000359683 KLHDC1Q8N7A1 406 aa9.69□□□□□ -0.86
NIF3L1-201ENST00000359683 RNF152Q8N8N0 203 aa9.69□□□□□ -0.86
NIF3L1-201ENST00000359683 SMIM8Q96KF7 97 aa9.69□□□□□ -0.86
NIF3L1-201ENST00000359683 RAB40CQ96S21 281 aa9.69□□□□□ -0.86
NIF3L1-201ENST00000359683 C11orf1Q9H5F2 150 aa9.69□□□□□ -0.86
NIF3L1-201ENST00000359683 LSM5Q9Y4Y9 91 aaKnown RBP9.69□□□□□ -0.86
NIF3L1-201ENST00000359683 F11RQ9Y624 299 aaKnown RBP9.69□□□□□ -0.86
NIF3L1-201ENST00000359683 U3KQ87 197 aa9.69□□□□□ -0.86
NIF3L1-201ENST00000359683 SSSCA1O60232 199 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 TMEM50AO95807 157 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 ELANEP08246 267 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 IAPPP10997 89 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 PSMB8P28062 276 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 SNCAP37840 140 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 MFAP2P55001 183 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 ATP5IP56385 69 aaPredicted RBP9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 TAS2R30P59541 319 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 RAP2BP61225 183 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 FOXE3Q13461 319 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 AWAT1Q58HT5 328 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 TEX38Q6PEX7 206 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 C19orf35Q6ZS72 473 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 OR5AU1Q8NGC0 362 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 OR1L6Q8NGR2 347 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 OR1P1Q8NH06 330 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 FANCD2OSQ96PS1 177 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 RNF126Q9BV68 326 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 DMRT1Q9Y5R6 373 aa9.68□□□□□ -0.86
NIF3L1-201ENST00000359683 IGLV11-55A0A075B6I3 123 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 TRBV9A0A0B4J1U6 114 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 H0YIZ8 118 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 DEDDO75618 318 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 MPC2O95563 127 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 PRH1P02810 166 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 DEFA4P12838 97 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 SUB1P53999 127 aaKnown RBP eCLIP9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 S100A10P60903 97 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 C2orf83Q53S99 150 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 SLC24A4Q8NFF2 622 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 TMEM170AQ8WVE7 144 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 KLK15Q9H2R5 256 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 IFNA10P01566 189 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 RLN2P04090 185 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 HIST1H1BP16401 226 aaKnown RBP9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 RAB9AP51151 201 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 CD83Q01151 205 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 KIAA0141Q14154 515 aaPredicted RBP9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 LRRC37A5PQ49AS3 106 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 TCTEX1D4Q5JR98 221 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 SLC25A24Q6NUK1 477 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 NOXA1Q86UR1 476 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 MS4A10Q96PG2 267 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 SLA2Q9H6Q3 261 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 ZNF355PQ9NSJ1 428 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 PSENENQ9NZ42 101 aa9.67□□□□□ -0.86
NIF3L1-201ENST00000359683 TRAV14DV4A0A0A6YYC5 116 aa9.66□□□□□ -0.86
NIF3L1-201ENST00000359683 C15orf62A8K5M9 175 aa9.66□□□□□ -0.86
NIF3L1-201ENST00000359683 L7N2F9 121 aa9.66□□□□□ -0.86
NIF3L1-201ENST00000359683 CYB5BO43169 146 aa9.66□□□□□ -0.86
NIF3L1-201ENST00000359683 TSC22D2O75157 780 aa9.66□□□□□ -0.86
NIF3L1-201ENST00000359683 PF4V1P10720 104 aa9.66□□□□□ -0.86
NIF3L1-201ENST00000359683 LYL1P12980 280 aa9.66□□□□□ -0.86
NIF3L1-201ENST00000359683 PVALBP20472 110 aaPredicted RBP9.66□□□□□ -0.86
NIF3L1-201ENST00000359683 NPY1RP25929 384 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms