RNA–Protein interactions for RNA: ENST00000359171.8

NUP98-203, Transcript of nucleoporin 98, humanhuman

TSL 5 BASIC

Gene NUP98, Length 7,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-203ENST00000359171 LINC00114Q6XXX2 140 aa12.23□□□□□ -0.45
NUP98-203ENST00000359171 NUDT10Q8NFP7 164 aa12.23□□□□□ -0.45
NUP98-203ENST00000359171 LY6EQ16553 131 aa12.23□□□□□ -0.45
NUP98-203ENST00000359171 GTF3AQ92664 365 aaKnown RBP12.23□□□□□ -0.45
NUP98-203ENST00000359171 RNASE7Q9H1E1 156 aaKnown RBP12.23□□□□□ -0.45
NUP98-203ENST00000359171 TNFSF13O75888 250 aa12.23□□□□□ -0.45
NUP98-203ENST00000359171 HIST3H2BBQ8N257 126 aa12.23□□□□□ -0.45
NUP98-203ENST00000359171 ZNF479Q96JC4 524 aa12.23□□□□□ -0.45
NUP98-203ENST00000359171 REPIN1Q9BWE0 567 aaKnown RBP12.23□□□□□ -0.45
NUP98-203ENST00000359171 MUC21A0A0G2JKD1 596 aa12.23□□□□□ -0.45
NUP98-203ENST00000359171 MUC21A0A140T8X8 626 aa12.23□□□□□ -0.45
NUP98-203ENST00000359171 H0YIZ8 118 aa12.23□□□□□ -0.45
NUP98-203ENST00000359171 CD69Q07108 199 aa12.23□□□□□ -0.45
NUP98-203ENST00000359171 MUC21Q5SSG8 566 aa12.23□□□□□ -0.45
NUP98-203ENST00000359171 MS4A6AQ9H2W1 248 aa12.23□□□□□ -0.45
NUP98-203ENST00000359171 A8MWV9 139 aa12.23□□□□□ -0.45
NUP98-203ENST00000359171 LINC01559Q495D7 138 aa12.23□□□□□ -0.45
NUP98-203ENST00000359171 SLC50A1Q9BRV3 221 aa12.23□□□□□ -0.45
NUP98-203ENST00000359171 BTAF1O14981 1849 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 LINC01549A6NIU2 74 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 PLAURQ03405 335 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 TEX38Q6PEX7 206 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 SAP25Q8TEE9 199 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 HOXA3O43365 443 aaPredicted RBP12.22□□□□□ -0.45
NUP98-203ENST00000359171 IGKV3-20P01619 116 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 SRSF1Q07955 248 aaKnown RBP eCLIP12.22□□□□□ -0.452e-9■■□□□ 12.6
NUP98-203ENST00000359171 C1QL4Q86Z23 238 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 TMEM190Q8WZ59 177 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 PGPEP1Q9NXJ5 209 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 NAPSAO96009 420 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 PAX2Q02962 417 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 PCM1Q15154 2024 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 LINC00271P0C7V0 271 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 OR9G4Q8NGQ1 327 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 EPDR1Q9UM22 224 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 IGKV1D-43A0A0B4J1Z2 117 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 CD5P06127 495 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 IFI27P40305 119 aaPredicted RBP12.22□□□□□ -0.45
NUP98-203ENST00000359171 ORMDL2Q53FV1 153 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 PVRIGQ6DKI7 326 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 ATP5L2Q7Z4Y8 100 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 VKORC1Q9BQB6 163 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 SMPXQ9UHP9 88 aa12.22□□□□□ -0.45
NUP98-203ENST00000359171 UPK2O00526 184 aa12.21□□□□□ -0.45
NUP98-203ENST00000359171 C1orf162Q8NEQ5 155 aaPredicted RBP12.21□□□□□ -0.45
NUP98-203ENST00000359171 SPAG8Q99932 426 aaPredicted RBP12.21□□□□□ -0.45
NUP98-203ENST00000359171 DMRTA2Q96SC8 542 aa12.21□□□□□ -0.45
NUP98-203ENST00000359171 COLCA2A8K830 154 aa12.21□□□□□ -0.45
NUP98-203ENST00000359171 GATA2P23769 480 aaPredicted RBP12.21□□□□□ -0.45
NUP98-203ENST00000359171 CYSLTR1Q9Y271 337 aa12.21□□□□□ -0.45
NUP98-203ENST00000359171 CTSBP07858 339 aa12.21□□□□□ -0.46
NUP98-203ENST00000359171 TOMM7Q9P0U1 55 aa12.21□□□□□ -0.46
NUP98-203ENST00000359171 WDR83OSQ9Y284 106 aa12.21□□□□□ -0.46
NUP98-203ENST00000359171 PDLIM4P50479 330 aa12.21□□□□□ -0.46
NUP98-203ENST00000359171 MRPL20Q9BYC9 149 aaKnown RBP12.21□□□□□ -0.46
NUP98-203ENST00000359171 LINC00312Q9Y6C7 94 aa12.21□□□□□ -0.46
NUP98-203ENST00000359171 BCORQ6W2J9 1755 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 PLNP26678 52 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 PPP1R27Q86WC6 154 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 KIR3DL3Q8N743 410 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 COQ2Q96H96 371 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 ARPC1AQ92747 370 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 CHCHD2Q9Y6H1 151 aaPredicted RBP12.2□□□□□ -0.46
NUP98-203ENST00000359171 KIF13AQ9H1H9 1805 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 CFAP161Q6P656 301 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 PLPPR1Q8TBJ4 325 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 TSKUQ8WUA8 353 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 SCN9AQ15858 1988 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 TRAV8-4A0A0B4J246 113 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 FTH1P19P0C7X4 201 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 FAM89BQ8N5H3 189 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 FAM216BQ8N7L0 139 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 OCC1Q8TAD7 63 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 C15orf61A6NNL5 157 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 EFEMP2O95967 443 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 CKS1BP61024 79 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 RNF182Q8N6D2 247 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 CFHR5Q9BXR6 569 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 ZNF703Q9H7S9 590 aaPredicted RBP12.2□□□□□ -0.46
NUP98-203ENST00000359171 APC2O95996 2303 aa12.2□□□□□ -0.46
NUP98-203ENST00000359171 AMBPP02760 352 aa12.19□□□□□ -0.46
NUP98-203ENST00000359171 CENPVQ7Z7K6 275 aaPredicted RBP12.19□□□□□ -0.46
NUP98-203ENST00000359171 CECR9P0C854 216 aa12.19□□□□□ -0.46
NUP98-203ENST00000359171 APOBEC3AP31941 199 aaPredicted RBP12.19□□□□□ -0.46
NUP98-203ENST00000359171 GAGE13Q4V321 117 aa12.19□□□□□ -0.46
NUP98-203ENST00000359171 SLC25A15Q9Y619 301 aa12.19□□□□□ -0.46
NUP98-203ENST00000359171 COX6B1P14854 86 aa12.19□□□□□ -0.46
NUP98-203ENST00000359171 DUX3Q96PT4 197 aa12.19□□□□□ -0.46
NUP98-203ENST00000359171 TRPM3Q9HCF6 1732 aaPredicted RBP12.19□□□□□ -0.46
NUP98-203ENST00000359171 IGHV3-49A0A0A0MS15 119 aa12.19□□□□□ -0.46
NUP98-203ENST00000359171 A0A1B0GW64 132 aa12.19□□□□□ -0.46
NUP98-203ENST00000359171 FAM90A9PA6NNJ1 464 aa12.19□□□□□ -0.46
NUP98-203ENST00000359171 IGKCP01834 107 aa12.19□□□□□ -0.46
NUP98-203ENST00000359171 PPP1R32Q7Z5V6 425 aa12.19□□□□□ -0.46
NUP98-203ENST00000359171 DCTN5Q9BTE1 182 aa12.19□□□□□ -0.46
NUP98-203ENST00000359171 YPEL1O60688 119 aa12.19□□□□□ -0.46
NUP98-203ENST00000359171 SAA1P0DJI8 122 aaPredicted RBP12.19□□□□□ -0.46
NUP98-203ENST00000359171 YPEL2Q96QA6 119 aa12.19□□□□□ -0.46
NUP98-203ENST00000359171 PAPPAQ13219 1627 aa12.18□□□□□ -0.46
NUP98-203ENST00000359171 SPTA1P02549 2419 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms