RNA–Protein interactions for RNA: ENST00000359128.9

NLRC3-202, Transcript of NLR family CARD domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC3, Length 6,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC3-202ENST00000359128 BEX4Q9NWD9 120 aaPredicted RBP10.88□□□□□ -0.67
NLRC3-202ENST00000359128 SRIP30626 198 aa10.88□□□□□ -0.67
NLRC3-202ENST00000359128 TMEM250H0YL14 139 aa10.88□□□□□ -0.67
NLRC3-202ENST00000359128 CXCL2P19875 107 aa10.88□□□□□ -0.67
NLRC3-202ENST00000359128 FOLR2P14207 255 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 SRSF7Q16629 238 aaKnown RBP eCLIP10.87□□□□□ -0.67
NLRC3-202ENST00000359128 RBM38Q9H0Z9 239 aaKnown RBP10.87□□□□□ -0.67
NLRC3-202ENST00000359128 PIN1P1O15428 100 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 C1QL1O75973 258 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 SP5Q6BEB4 398 aaPredicted RBP10.87□□□□□ -0.67
NLRC3-202ENST00000359128 NUDT10Q8NFP7 164 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 PLSCR2Q9NRY7 297 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 AGAP20933 346 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 MUC21Q5SSG8 566 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 ZNF837Q96EG3 531 aaPredicted RBP10.87□□□□□ -0.67
NLRC3-202ENST00000359128 SCGB3A1Q96QR1 104 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 SLC50A1Q9BRV3 221 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 Q9H3A6 140 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 TRBV9A0A0B4J1U6 114 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 PSCAO43653 123 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 IGHV1-46P01743 117 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 FABP2P12104 132 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 OTX1P32242 354 aaPredicted RBP10.87□□□□□ -0.67
NLRC3-202ENST00000359128 TRAV41A0A0B4J266 112 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 PMCHL1Q16048 86 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 OR10J3Q5JRS4 329 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 C1QL2Q7Z5L3 287 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 OR10S1Q8NGN2 331 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 ARID2Q68CP9 1835 aa10.87□□□□□ -0.67
NLRC3-202ENST00000359128 TRGV11A0A075B6L2 103 aa10.86□□□□□ -0.67
NLRC3-202ENST00000359128 FOXF2Q12947 444 aa10.86□□□□□ -0.67
NLRC3-202ENST00000359128 LINC01356Q8N9X3 169 aa10.86□□□□□ -0.67
NLRC3-202ENST00000359128 SCN10AQ9Y5Y9 1956 aa10.86□□□□□ -0.67
NLRC3-202ENST00000359128 YPEL1O60688 119 aa10.86□□□□□ -0.67
NLRC3-202ENST00000359128 PAX8Q06710 450 aa10.86□□□□□ -0.67
NLRC3-202ENST00000359128 YPEL2Q96QA6 119 aa10.86□□□□□ -0.67
NLRC3-202ENST00000359128 NEUROG3Q9Y4Z2 214 aa10.86□□□□□ -0.67
NLRC3-202ENST00000359128 LINC00862A6NCI5 91 aa10.86□□□□□ -0.67
NLRC3-202ENST00000359128 CGAP01215 116 aa10.86□□□□□ -0.67
NLRC3-202ENST00000359128 PVRIGQ6DKI7 326 aa10.86□□□□□ -0.67
NLRC3-202ENST00000359128 FBLL1A6NHQ2 334 aaKnown RBP10.86□□□□□ -0.67
NLRC3-202ENST00000359128 TIMM23O14925 209 aa10.86□□□□□ -0.67
NLRC3-202ENST00000359128 GPX4P36969 197 aaPredicted RBP10.86□□□□□ -0.67
NLRC3-202ENST00000359128 TFF3Q07654 80 aa10.86□□□□□ -0.67
NLRC3-202ENST00000359128 TMEM136Q6ZRR5 245 aa10.86□□□□□ -0.67
NLRC3-202ENST00000359128 UPK2O00526 184 aa10.86□□□□□ -0.67
NLRC3-202ENST00000359128 MRPL13Q9BYD1 178 aaKnown RBP10.86□□□□□ -0.67
NLRC3-202ENST00000359128 ASCL4Q6XD76 172 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 CA7P43166 264 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 PKIAP61925 76 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 CACNG8Q8WXS5 425 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 SOX21Q9Y651 276 aaPredicted RBP10.85□□□□□ -0.67
NLRC3-202ENST00000359128 ZNF236Q9UL36 1845 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 IGKV3D-20A0A0C4DH25 116 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 MUC21A0A0G2JKD1 596 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 MUC21A0A140T8X8 626 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 F12P00748 615 aaPredicted RBP10.85□□□□□ -0.67
NLRC3-202ENST00000359128 SLC25A16P16260 332 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 FER1L6-AS1Q8NA97 138 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 A0A0G2JNJ9 132 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 OR9G9P0C7N8 305 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 BIVMQ86UB2 503 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 PPP1R3EQ9H7J1 279 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 Q9UFV3 132 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 CNTRLQ7Z7A1 2325 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 ZNF600Q6ZNG1 722 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 TMEM219Q86XT9 240 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 LRTM2Q8N967 370 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 PLPPR1Q8TBJ4 325 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 PRADC1Q9BSG0 188 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 OTORQ9NRC9 128 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 MSRB2Q9Y3D2 182 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 RNF114Q9Y508 228 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 XIRP1Q702N8 1843 aaKnown RBP10.85□□□□□ -0.67
NLRC3-202ENST00000359128 RALGAPA2Q2PPJ7 1873 aa10.85□□□□□ -0.67
NLRC3-202ENST00000359128 HOXA5P20719 270 aa10.84□□□□□ -0.67
NLRC3-202ENST00000359128 F5P12259 2224 aa10.84□□□□□ -0.67
NLRC3-202ENST00000359128 RND3P61587 244 aa10.84□□□□□ -0.67
NLRC3-202ENST00000359128 SIGLEC15Q6ZMC9 328 aa10.84□□□□□ -0.67
NLRC3-202ENST00000359128 GRIFINA4D1Z8 144 aa10.84□□□□□ -0.67
NLRC3-202ENST00000359128 SLC25A20O43772 301 aa10.84□□□□□ -0.67
NLRC3-202ENST00000359128 TMEM183AQ8IXX5 376 aa10.84□□□□□ -0.67
NLRC3-202ENST00000359128 PSMG3Q9BT73 122 aaPredicted RBP10.84□□□□□ -0.67
NLRC3-202ENST00000359128 LINC00527Q9UJ94 153 aa10.84□□□□□ -0.67
NLRC3-202ENST00000359128 TFF1P04155 84 aa10.84□□□□□ -0.67
NLRC3-202ENST00000359128 MORN2Q502X0 79 aa10.84□□□□□ -0.67
NLRC3-202ENST00000359128 TGIF2-C20orf24A0A0A6YYL0 155 aa10.84□□□□□ -0.67
NLRC3-202ENST00000359128 RPL35AP18077 110 aaKnown RBP10.84□□□□□ -0.67
NLRC3-202ENST00000359128 CACNA1CQ13936 2221 aa10.84□□□□□ -0.67
NLRC3-202ENST00000359128 TRBV7-9A0A0J9YWB2 115 aa10.84□□□□□ -0.67
NLRC3-202ENST00000359128 KIAA1644Q3SXP7 199 aa10.84□□□□□ -0.67
NLRC3-202ENST00000359128 PLSCR4Q9NRQ2 329 aa10.84□□□□□ -0.67
NLRC3-202ENST00000359128 PSMG4Q5JS54 123 aa10.83□□□□□ -0.68
NLRC3-202ENST00000359128 WFDC12Q8WWY7 111 aa10.83□□□□□ -0.68
NLRC3-202ENST00000359128 NUDT11Q96G61 164 aa10.83□□□□□ -0.68
NLRC3-202ENST00000359128 C18orf15Q96N68 181 aa10.83□□□□□ -0.68
NLRC3-202ENST00000359128 ST20Q9HBF5 79 aa10.83□□□□□ -0.68
NLRC3-202ENST00000359128 UNC13CQ8NB66 2214 aa10.83□□□□□ -0.68
NLRC3-202ENST00000359128 TRAV21A0A0B4J279 112 aa10.83□□□□□ -0.68
NLRC3-202ENST00000359128 TRGC2P03986 189 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms