RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 LRRC37A2A6NM11 1700 aa8.62□□□□□ -1.03
CLIP1-202ENST00000358808 TRGV11A0A075B6L2 103 aa8.62□□□□□ -1.03
CLIP1-202ENST00000358808 NBEAP1P0C6P0 100 aa8.62□□□□□ -1.03
CLIP1-202ENST00000358808 P2RY4P51582 365 aa8.62□□□□□ -1.03
CLIP1-202ENST00000358808 FDCSPQ8NFU4 85 aa8.62□□□□□ -1.03
CLIP1-202ENST00000358808 FMC1Q96HJ9 113 aa8.62□□□□□ -1.03
CLIP1-202ENST00000358808 CABIN1Q9Y6J0 2220 aa8.62□□□□□ -1.03
CLIP1-202ENST00000358808 TRAV8-4A0A0B4J246 113 aa8.62□□□□□ -1.03
CLIP1-202ENST00000358808 SFTA2Q6UW10 78 aa8.62□□□□□ -1.03
CLIP1-202ENST00000358808 CA7P43166 264 aa8.62□□□□□ -1.03
CLIP1-202ENST00000358808 SLC25A47Q6Q0C1 308 aa8.62□□□□□ -1.03
CLIP1-202ENST00000358808 IFI27L2Q9H2X8 130 aa8.62□□□□□ -1.03
CLIP1-202ENST00000358808 TRBV5-3A0A0A0MS03 114 aa8.61□□□□□ -1.03
CLIP1-202ENST00000358808 H0YL77 283 aa8.61□□□□□ -1.03
CLIP1-202ENST00000358808 FBLN7Q53RD9 439 aa8.61□□□□□ -1.03
CLIP1-202ENST00000358808 C8orf82Q6P1X6 216 aaPredicted RBP8.61□□□□□ -1.03
CLIP1-202ENST00000358808 IGHV3-64A0A075B6Q5 118 aa8.61□□□□□ -1.03
CLIP1-202ENST00000358808 COX6A1P12074 109 aa8.61□□□□□ -1.03
CLIP1-202ENST00000358808 SRD5A1P18405 259 aa8.61□□□□□ -1.03
CLIP1-202ENST00000358808 RIPPLY3P57055 190 aa8.61□□□□□ -1.03
CLIP1-202ENST00000358808 HIST1H4AP62805 103 aaKnown RBP8.61□□□□□ -1.03
CLIP1-202ENST00000358808 IRF3Q14653 427 aa8.61□□□□□ -1.03
CLIP1-202ENST00000358808 GATAD1Q8WUU5 269 aa8.61□□□□□ -1.03
CLIP1-202ENST00000358808 MS4A6AQ9H2W1 248 aa8.61□□□□□ -1.03
CLIP1-202ENST00000358808 SAXO1Q8IYX7 474 aa8.61□□□□□ -1.03
CLIP1-202ENST00000358808 ST6GALNAC6Q969X2 333 aa8.61□□□□□ -1.03
CLIP1-202ENST00000358808 IGKV1D-42A0A075B6H8 117 aa8.61□□□□□ -1.03
CLIP1-202ENST00000358808 LHBP01229 141 aa8.61□□□□□ -1.03
CLIP1-202ENST00000358808 RPL35AP18077 110 aaKnown RBP8.61□□□□□ -1.03
CLIP1-202ENST00000358808 SEPSECSQ9HD40 501 aaKnown RBP8.61□□□□□ -1.03
CLIP1-202ENST00000358808 ZNF638Q14966 1978 aaKnown RBP8.61□□□□□ -1.03
CLIP1-202ENST00000358808 C19orf67A6NJJ6 358 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 CRYBA2P53672 197 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 ZNF585BQ52M93 769 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 C3orf56Q8N813 242 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 ELF5Q9UKW6 265 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-202ENST00000358808 RTTNQ86VV8 2226 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 TRAV14DV4A0A0A6YYC5 116 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 C1QCP02747 245 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 CEACAM1P13688 526 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 HOXD3P31249 432 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-202ENST00000358808 NANOS3P60323 173 aaKnown RBP8.6□□□□□ -1.03
CLIP1-202ENST00000358808 TIMM23BQ5SRD1 257 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 FAM201AQ5SY85 155 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 ZNF562Q6V9R5 426 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 ABHD17AQ96GS6 310 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 CBLN4Q9NTU7 201 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 CGB3P0DN86 165 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 NPC2P61916 151 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 PRB3Q04118 309 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-202ENST00000358808 MESP2Q0VG99 397 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 ZNF48Q96MX3 618 aaPredicted RBP8.6□□□□□ -1.03
CLIP1-202ENST00000358808 GZMBP10144 247 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 DRAM1Q8N682 238 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 SLC25A28Q96A46 364 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 SMIM8Q96KF7 97 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 RPP21Q9H633 154 aaKnown RBP8.6□□□□□ -1.03
CLIP1-202ENST00000358808 A0A1B0GUT8 65 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 NGFRP08138 427 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 CXCL2P19875 107 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 SIGLEC12Q96PQ1 595 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 ANAPC10Q9UM13 185 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 ZNF257Q9Y2Q1 563 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 HS3ST3B1Q9Y662 390 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 SPCS1Q9Y6A9 102 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 SELENOKQ9Y6D0 94 aa8.6□□□□□ -1.03
CLIP1-202ENST00000358808 FSTP19883 344 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 CBLN1P23435 193 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 EGR4Q05215 589 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 TBR1Q16650 682 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 FAM216BQ8N7L0 139 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 OR52E5Q8NH55 327 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 PPP1R32Q7Z5V6 425 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 PPP1R3EQ9H7J1 279 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 DPRXA6NFQ7 191 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 VWC2LB2RUY7 222 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 ERVH48-1M5A8F1 160 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 CGAP01215 116 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 IGFBP2P18065 325 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 UCP3P55916 312 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 RFLNBQ8N5W9 214 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 OSR1Q8TAX0 266 aaPredicted RBP8.59□□□□□ -1.03
CLIP1-202ENST00000358808 VKORC1Q9BQB6 163 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 Q9H3A6 140 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 SIRT4Q9Y6E7 314 aaPredicted RBP8.59□□□□□ -1.03
CLIP1-202ENST00000358808 PAX4O43316 350 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 COX5BP10606 129 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 GPX4P36969 197 aaPredicted RBP8.59□□□□□ -1.03
CLIP1-202ENST00000358808 TMEM249Q2WGJ8 235 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 Q6ZT83 130 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 OR5P3Q8WZ94 311 aa8.59□□□□□ -1.03
CLIP1-202ENST00000358808 CENPVL1A0A0U1RR11 272 aa8.59□□□□□ -1.04
CLIP1-202ENST00000358808 TM4SF5O14894 197 aa8.59□□□□□ -1.04
CLIP1-202ENST00000358808 EREGO14944 169 aa8.59□□□□□ -1.04
CLIP1-202ENST00000358808 CGB7P0DN87 165 aa8.59□□□□□ -1.04
CLIP1-202ENST00000358808 CMC4P56277 68 aaPredicted RBP8.59□□□□□ -1.04
CLIP1-202ENST00000358808 ACP7Q6ZNF0 438 aa8.59□□□□□ -1.04
CLIP1-202ENST00000358808 CIARTQ8N365 385 aaPredicted RBP8.59□□□□□ -1.04
CLIP1-202ENST00000358808 SNRNP200O75643 2136 aaKnown RBP8.58□□□□□ -1.04
CLIP1-202ENST00000358808 MSGN1A6NI15 193 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms