RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 ZCCHC24Q8N2G6 241 aaKnown RBP11.67□□□□□ -0.54
NIPAL3-203ENST00000358028 GATAD1Q8WUU5 269 aa11.67□□□□□ -0.54
NIPAL3-203ENST00000358028 RHOVQ96L33 236 aa11.67□□□□□ -0.54
NIPAL3-203ENST00000358028 GGTLC1Q9BX51 225 aa11.67□□□□□ -0.54
NIPAL3-203ENST00000358028 CHODLQ9H9P2 273 aa11.67□□□□□ -0.54
NIPAL3-203ENST00000358028 NPVFQ9HCQ7 196 aa11.67□□□□□ -0.54
NIPAL3-203ENST00000358028 TMEM14BQ9NUH8 114 aa11.67□□□□□ -0.54
NIPAL3-203ENST00000358028 SLC25A10Q9UBX3 287 aaPredicted RBP11.67□□□□□ -0.54
NIPAL3-203ENST00000358028 DMRT1Q9Y5R6 373 aa11.67□□□□□ -0.54
NIPAL3-203ENST00000358028 TET2Q6N021 2002 aaPredicted RBP11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 VSTM5A8MXK1 200 aa11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 LINC00587B1AMM8 73 aa11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 PPP5D1E7EU14 171 aa11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 CXorf1O96002 111 aa11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 IGHV2-70P01814 119 aa11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 ATP5IP56385 69 aaPredicted RBP11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 FAM3BP58499 235 aaPredicted RBP11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 HSPE1P61604 102 aaKnown RBP11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 MEF2CQ06413 473 aaPredicted RBP11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 MGST2Q99735 147 aa11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 GAL3ST2Q9H3Q3 398 aa11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 MS4A5Q9H3V2 200 aa11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 SAP30LQ9HAJ7 183 aa11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 ENY2Q9NPA8 101 aa11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 LSM4Q9Y4Z0 139 aaKnown RBP11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 PXMP4Q9Y6I8 212 aa11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 CCDC168Q8NDH2 2452 aa11.66□□□□□ -0.54
NIPAL3-203ENST00000358028 PPIAL4EA0A075B759 164 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 PPIAL4DF5H284 164 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 TMEM178BH3BS89 294 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 GGCTO75223 188 aaKnown RBP11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 TYMSP04818 313 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 SOD3P08294 240 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 STAG3L2P0CL84 134 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 STAG3L3P0CL85 134 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 PPIAL4FP0DN26 164 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 RAB31Q13636 194 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 KCNIP4Q6PIL6 250 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 ABHD12Q8N2K0 398 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 TMEM170AQ8WVE7 144 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 IMMP2LQ96T52 175 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 NGBQ9NPG2 151 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 PRNDQ9UKY0 176 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 PPIAL4AQ9Y536 164 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 ROS1P08922 2347 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 SPG11Q96JI7 2443 aa11.65□□□□□ -0.54
NIPAL3-203ENST00000358028 A0A1W2PPR1 153 aa11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 NPY1RP25929 384 aa11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 LCN2P80188 198 aa11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 PYY3Q5JQD4 70 aa11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 SLC24A4Q8NFF2 622 aa11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 OR4X1Q8NH49 305 aa11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 TMEM204Q9BSN7 226 aa11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 ZNF257Q9Y2Q1 563 aa11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 CT45A6P0DMU7 189 aa11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 CT45A5P0DMU8 189 aa11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 CT45A7P0DMV0 189 aa11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 NPPCP23582 126 aa11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 LOXP28300 417 aaPredicted RBP11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 COA6Q5JTJ3 125 aaKnown RBP11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 OR10D4PQ8NGN7 298 aa11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 OR2T10Q8NGZ9 312 aa11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 GPR61Q9BZJ8 451 aa11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 SLC35D1Q9NTN3 355 aa11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 TEP1Q99973 2627 aaKnown RBP11.64□□□□□ -0.55
NIPAL3-203ENST00000358028 SHISA9B4DS77 424 aa11.63□□□□□ -0.55
NIPAL3-203ENST00000358028 FCN3O75636 299 aa11.63□□□□□ -0.55
NIPAL3-203ENST00000358028 IL6RP08887 468 aaPredicted RBP11.63□□□□□ -0.55
NIPAL3-203ENST00000358028 RPL29P47914 159 aaKnown RBP11.63□□□□□ -0.55
NIPAL3-203ENST00000358028 GNB1P62873 340 aa11.63□□□□□ -0.55
NIPAL3-203ENST00000358028 RPL31P62899 125 aaKnown RBP11.63□□□□□ -0.55
NIPAL3-203ENST00000358028 RTL8BQ17RB0 113 aa11.63□□□□□ -0.55
NIPAL3-203ENST00000358028 TEPPQ6URK8 271 aa11.63□□□□□ -0.55
NIPAL3-203ENST00000358028 ZNF833PQ6ZTB9 187 aa11.63□□□□□ -0.55
NIPAL3-203ENST00000358028 LINC01551Q86U37 167 aa11.63□□□□□ -0.55
NIPAL3-203ENST00000358028 TMEM183AQ8IXX5 376 aa11.63□□□□□ -0.55
NIPAL3-203ENST00000358028 ACY3Q96HD9 319 aa11.63□□□□□ -0.55
NIPAL3-203ENST00000358028 ZNF714Q96N38 554 aa11.63□□□□□ -0.55
NIPAL3-203ENST00000358028 TMEM106BQ9NUM4 274 aa11.63□□□□□ -0.55
NIPAL3-203ENST00000358028 ZNRD1Q9P1U0 126 aa11.63□□□□□ -0.55
NIPAL3-203ENST00000358028 OR51B2Q9Y5P1 312 aa11.63□□□□□ -0.55
NIPAL3-203ENST00000358028 PLCE1Q9P212 2302 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 E7EQL1 145 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 UPK2O00526 184 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 TNFRSF13BO14836 293 aaPredicted RBP11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 MT-CO2P00403 227 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 CCL3L1P16619 93 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 RHOBP62745 196 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 GCSAMLQ5JQS6 135 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 CST9LP1Q5W188 147 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 NRGNQ92686 78 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 PFDN5Q99471 154 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 DYNLRB1Q9NP97 96 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 ARL2-SNX15V9GYD0 113 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 ARL14EPLP0DKL9 152 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 DEFA4P12838 97 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 MYOD1P15172 320 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 GFI1BQ5VTD9 330 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 MIC13Q5XKP0 118 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms