RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 SMLR1H3BR10 107 aa11.62□□□□□ -0.55
CCNE1-202ENST00000357943 IGLV1-40P01703 118 aa11.62□□□□□ -0.55
CCNE1-202ENST00000357943 PRH1P02810 166 aa11.62□□□□□ -0.55
CCNE1-202ENST00000357943 CRYGCP07315 174 aa11.62□□□□□ -0.55
CCNE1-202ENST00000357943 PSMB6P28072 239 aa11.62□□□□□ -0.55
CCNE1-202ENST00000357943 HOXA1P49639 335 aaPredicted RBP11.62□□□□□ -0.55
CCNE1-202ENST00000357943 SRSF4Q08170 494 aaKnown RBP11.62□□□□□ -0.55
CCNE1-202ENST00000357943 TEX38Q6PEX7 206 aa11.62□□□□□ -0.55
CCNE1-202ENST00000357943 FAM110DQ8TAY7 271 aaPredicted RBP11.62□□□□□ -0.55
CCNE1-202ENST00000357943 WFDC12Q8WWY7 111 aa11.62□□□□□ -0.55
CCNE1-202ENST00000357943 C2orf50Q96LR7 162 aa11.62□□□□□ -0.55
CCNE1-202ENST00000357943 MAGT1Q9H0U3 335 aa11.62□□□□□ -0.55
CCNE1-202ENST00000357943 KLK15Q9H2R5 256 aa11.62□□□□□ -0.55
CCNE1-202ENST00000357943 NPIPB5A8MRT5 1133 aa11.61□□□□□ -0.55
CCNE1-202ENST00000357943 CEBPZOSA8MTT3 80 aa11.61□□□□□ -0.55
CCNE1-202ENST00000357943 FBXO24O75426 580 aa11.61□□□□□ -0.55
CCNE1-202ENST00000357943 PSMB8P28062 276 aa11.61□□□□□ -0.55
CCNE1-202ENST00000357943 NKX2-1P43699 371 aaPredicted RBP11.61□□□□□ -0.55
CCNE1-202ENST00000357943 RAP2BP61225 183 aa11.61□□□□□ -0.55
CCNE1-202ENST00000357943 ID3Q02535 119 aa11.61□□□□□ -0.55
CCNE1-202ENST00000357943 TCTEX1D4Q5JR98 221 aa11.61□□□□□ -0.55
CCNE1-202ENST00000357943 HSD17B13Q7Z5P4 300 aaPredicted RBP11.61□□□□□ -0.55
CCNE1-202ENST00000357943 NOXA1Q86UR1 476 aa11.61□□□□□ -0.55
CCNE1-202ENST00000357943 ASB13Q8WXK3 278 aa11.61□□□□□ -0.55
CCNE1-202ENST00000357943 WDR89Q96FK6 387 aaPredicted RBP11.61□□□□□ -0.55
CCNE1-202ENST00000357943 MS4A10Q96PG2 267 aa11.61□□□□□ -0.55
CCNE1-202ENST00000357943 RBKSQ9H477 322 aa11.61□□□□□ -0.55
CCNE1-202ENST00000357943 ZNF355PQ9NSJ1 428 aa11.61□□□□□ -0.55
CCNE1-202ENST00000357943 CACFD1Q9UGQ2 172 aa11.61□□□□□ -0.55
CCNE1-202ENST00000357943 FAM90A26D6RGX4 464 aa11.6□□□□□ -0.55
CCNE1-202ENST00000357943 INS-IGF2F8WCM5 200 aa11.6□□□□□ -0.55
CCNE1-202ENST00000357943 SCGB1D2O95969 90 aa11.6□□□□□ -0.55
CCNE1-202ENST00000357943 CD28P10747 220 aa11.6□□□□□ -0.55
CCNE1-202ENST00000357943 NKX2-5P52952 324 aaPredicted RBP11.6□□□□□ -0.55
CCNE1-202ENST00000357943 POLR2GP62487 172 aaKnown RBP eCLIP11.6□□□□□ -0.55
CCNE1-202ENST00000357943 OR2C3Q8N628 320 aa11.6□□□□□ -0.55
CCNE1-202ENST00000357943 DTD1Q8TEA8 209 aa11.6□□□□□ -0.55
CCNE1-202ENST00000357943 ENY2Q9NPA8 101 aa11.6□□□□□ -0.55
CCNE1-202ENST00000357943 DMRT1Q9Y5R6 373 aa11.6□□□□□ -0.55
CCNE1-202ENST00000357943 TRRAPQ9Y4A5 3859 aa11.6□□□□□ -0.55
CCNE1-202ENST00000357943 G3V3Q6 166 aa11.6□□□□□ -0.55
CCNE1-202ENST00000357943 MBPP02686 304 aaPredicted RBP11.6□□□□□ -0.55
CCNE1-202ENST00000357943 PF4V1P10720 104 aa11.6□□□□□ -0.55
CCNE1-202ENST00000357943 DEFA4P12838 97 aa11.6□□□□□ -0.55
CCNE1-202ENST00000357943 ERHP84090 104 aaKnown RBP11.6□□□□□ -0.55
CCNE1-202ENST00000357943 IL15RAQ13261 267 aa11.6□□□□□ -0.55
CCNE1-202ENST00000357943 OR4X2Q8NGF9 303 aa11.6□□□□□ -0.55
CCNE1-202ENST00000357943 OR2T35Q8NGX2 323 aa11.6□□□□□ -0.55
CCNE1-202ENST00000357943 P2RX4Q99571 388 aa11.6□□□□□ -0.55
CCNE1-202ENST00000357943 SYNGR2O43760 224 aa11.59□□□□□ -0.55
CCNE1-202ENST00000357943 RPLP1P05386 114 aaKnown RBP11.59□□□□□ -0.55
CCNE1-202ENST00000357943 ELANEP08246 267 aa11.59□□□□□ -0.55
CCNE1-202ENST00000357943 IAPPP10997 89 aa11.59□□□□□ -0.55
CCNE1-202ENST00000357943 RAB9AP51151 201 aa11.59□□□□□ -0.55
CCNE1-202ENST00000357943 DEFA5Q01523 94 aa11.59□□□□□ -0.55
CCNE1-202ENST00000357943 FOXE3Q13461 319 aa11.59□□□□□ -0.55
CCNE1-202ENST00000357943 FANCD2OSQ96PS1 177 aa11.59□□□□□ -0.55
CCNE1-202ENST00000357943 HEYLQ9NQ87 328 aaPredicted RBP11.59□□□□□ -0.55
CCNE1-202ENST00000357943 F11RQ9Y624 299 aaKnown RBP11.59□□□□□ -0.55
CCNE1-202ENST00000357943 WRBO00258 174 aa11.58□□□□□ -0.56
CCNE1-202ENST00000357943 MFAP2P55001 183 aa11.58□□□□□ -0.56
CCNE1-202ENST00000357943 Q5BKY6 102 aa11.58□□□□□ -0.56
CCNE1-202ENST00000357943 TMEM65Q6PI78 240 aa11.58□□□□□ -0.56
CCNE1-202ENST00000357943 MRPL41Q8IXM3 137 aaKnown RBP11.58□□□□□ -0.56
CCNE1-202ENST00000357943 COMMD1Q8N668 190 aa11.58□□□□□ -0.56
CCNE1-202ENST00000357943 RNF152Q8N8N0 203 aa11.58□□□□□ -0.56
CCNE1-202ENST00000357943 NMES1Q9C002 83 aa11.58□□□□□ -0.56
CCNE1-202ENST00000357943 HIPK2Q9H2X6 1198 aa11.58□□□□□ -0.56
CCNE1-202ENST00000357943 RCL1Q9Y2P8 373 aaKnown RBP11.58□□□□□ -0.56
CCNE1-202ENST00000357943 IGLV11-55A0A075B6I3 123 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 H3BUA1 57 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 SSSCA1O60232 199 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 MED6O75586 246 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 TRGV3P03979 118 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 SNCAP37840 140 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 TPPP2P59282 170 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 RAB32Q13637 225 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 BSXQ3C1V8 233 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 C12orf54Q6X4T0 127 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 ZNF114Q8NC26 417 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 OR11H4Q8NGC9 324 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 OR1P1Q8NH06 330 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 HYLS1Q96M11 299 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 CITED2Q99967 270 aaPredicted RBP11.57□□□□□ -0.56
CCNE1-202ENST00000357943 LSM5Q9Y4Y9 91 aaKnown RBP11.57□□□□□ -0.56
CCNE1-202ENST00000357943 TRBV9A0A0B4J1U6 114 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 K7EPK0 472 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 OR2J3O76001 311 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 BRI3O95415 125 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 TMEM50AO95807 157 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 RNASE2P10153 161 aaKnown RBP11.57□□□□□ -0.56
CCNE1-202ENST00000357943 HTR2BP41595 481 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 S100A10P60903 97 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 KIAA0141Q14154 515 aaPredicted RBP11.57□□□□□ -0.56
CCNE1-202ENST00000357943 LRRC37A5PQ49AS3 106 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 SLC25A24Q6NUK1 477 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 SLC24A4Q8NFF2 622 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 TMEM170AQ8WVE7 144 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 CITED1Q99966 193 aa11.57□□□□□ -0.56
CCNE1-202ENST00000357943 SLA2Q9H6Q3 261 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms