RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 IGHV1-2P23083 117 aa9.88□□□□□ -0.83
COL9A1-202ENST00000357250 ATP5J2P56134 94 aa9.88□□□□□ -0.83
COL9A1-202ENST00000357250 TBR1Q16650 682 aa9.88□□□□□ -0.83
COL9A1-202ENST00000357250 GPR82Q96P67 336 aa9.88□□□□□ -0.83
COL9A1-202ENST00000357250 WNK2Q9Y3S1 2297 aa9.88□□□□□ -0.83
COL9A1-202ENST00000357250 ZFP36L1Q07352 338 aaKnown RBP9.88□□□□□ -0.83
COL9A1-202ENST00000357250 MRPS16Q9Y3D3 137 aaKnown RBP9.88□□□□□ -0.83
COL9A1-202ENST00000357250 C17orf100A8MU93 164 aa9.88□□□□□ -0.83
COL9A1-202ENST00000357250 ID3Q02535 119 aa9.88□□□□□ -0.83
COL9A1-202ENST00000357250 FAM209BQ5JX69 171 aa9.88□□□□□ -0.83
COL9A1-202ENST00000357250 REC114Q7Z4M0 266 aa9.88□□□□□ -0.83
COL9A1-202ENST00000357250 UBE2L6O14933 153 aa9.88□□□□□ -0.83
COL9A1-202ENST00000357250 FGF16O43320 207 aa9.88□□□□□ -0.83
COL9A1-202ENST00000357250 SMIM12Q96EX1 92 aa9.88□□□□□ -0.83
COL9A1-202ENST00000357250 A0A1B0GUT8 65 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 ATP5LO75964 103 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 LGALS3P17931 250 aaKnown RBP9.87□□□□□ -0.83
COL9A1-202ENST00000357250 CSRP1P21291 193 aaKnown RBP9.87□□□□□ -0.83
COL9A1-202ENST00000357250 FAM159AQ6UWV7 190 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 RNF126Q9BV68 326 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 C21orf62Q9NYP8 219 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 PHF3Q92576 2039 aaKnown RBP9.87□□□□□ -0.83
COL9A1-202ENST00000357250 A0A0G2JMM0 328 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 A0A1W2PPB8 328 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 A0A1W2PRS3 328 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 KIR3DP1A8MWS1 328 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 C1QTNF9BB2RNN3 333 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 TCF21O43680 179 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 GAS1P54826 345 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 ZNF497Q6ZNH5 498 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 BIVMQ86UB2 503 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 OR52E5Q8NH55 327 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 SIGLEC5O15389 551 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 HINT1P49773 126 aaPredicted RBP9.87□□□□□ -0.83
COL9A1-202ENST00000357250 HIST1H4GQ99525 98 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 MYLKQ15746 1914 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 NLRC5Q86WI3 1866 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 IGKV1-9A0A0C4DH69 117 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 DPRXA6NFQ7 191 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 UPK2O00526 184 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 ICAM4Q14773 271 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 LY6G6FQ5SQ64 297 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 C17orf82Q86X59 251 aaPredicted RBP9.87□□□□□ -0.83
COL9A1-202ENST00000357250 TEX45Q8NA69 505 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 TNFRSF14Q92956 283 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 CADP27708 2225 aa9.87□□□□□ -0.83
COL9A1-202ENST00000357250 REG1AP05451 166 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 SNRPCP09234 159 aaKnown RBP9.86□□□□□ -0.83
COL9A1-202ENST00000357250 IGFBP2P18065 325 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 ADIPOQQ15848 244 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 SSBP3Q9BWW4 388 aaPredicted RBP9.86□□□□□ -0.83
COL9A1-202ENST00000357250 H3BVH4 76 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 OR11H12B2RN74 326 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 CRXO43186 299 aaPredicted RBP9.86□□□□□ -0.83
COL9A1-202ENST00000357250 MOSP00540 346 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 CRYGSP22914 178 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 TFPI2P48307 235 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 CCL20P78556 96 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 FAM166AQ6J272 317 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 OR11H1Q8NG94 326 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 OR4D5Q8NGN0 318 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 OR11H2Q8NH07 326 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 RPP21Q9H633 154 aaKnown RBP9.86□□□□□ -0.83
COL9A1-202ENST00000357250 RAXQ9Y2V3 346 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 AUP1Q9Y679 476 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 C15orf61A6NNL5 157 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 CGAP01215 116 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 CBLN1P23435 193 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 FAM27E3Q08E93 113 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 PVRIGQ6DKI7 326 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 NEU1Q99519 415 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 TSC2P49815 1807 aa9.86□□□□□ -0.83
COL9A1-202ENST00000357250 TRBV20OR9-2A0A075B6H5 130 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 A0A1W2PRE2 83 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 NTN3O00634 580 aaPredicted RBP9.85□□□□□ -0.83
COL9A1-202ENST00000357250 PLP1P60201 277 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 DNLZQ5SXM8 178 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 MBNL2Q5VZF2 373 aaKnown RBP9.85□□□□□ -0.83
COL9A1-202ENST00000357250 FAM216BQ8N7L0 139 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 ZNF414Q96IQ9 312 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 MPDZO75970 2070 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 PROB1E7EW31 1015 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 KIAA1644Q3SXP7 199 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 TMEM136Q6ZRR5 245 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 PLPPR1Q8TBJ4 325 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 NEUROG1Q92886 237 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 IZUMO1RA6ND01 250 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 GFRA3O60609 400 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 HOXA5P20719 270 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 TFF3Q07654 80 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 PAQR4Q8N4S7 273 aaPredicted RBP9.85□□□□□ -0.83
COL9A1-202ENST00000357250 ZIC4Q8N9L1 334 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 ZNF837Q96EG3 531 aaPredicted RBP9.85□□□□□ -0.83
COL9A1-202ENST00000357250 OTORQ9NRC9 128 aa9.85□□□□□ -0.83
COL9A1-202ENST00000357250 RNF224P0DH78 156 aa9.84□□□□□ -0.83
COL9A1-202ENST00000357250 TCF23Q7RTU1 214 aa9.84□□□□□ -0.83
COL9A1-202ENST00000357250 MBD3L1Q8WWY6 194 aa9.84□□□□□ -0.83
COL9A1-202ENST00000357250 ARPC1AQ92747 370 aa9.84□□□□□ -0.83
COL9A1-202ENST00000357250 FBXL15Q9H469 300 aa9.84□□□□□ -0.83
COL9A1-202ENST00000357250 MOB4Q9Y3A3 225 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms