RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 ST6GALNAC6Q969X2 333 aa13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 HIST1H4GQ99525 98 aa13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 RLFQ13129 1914 aa13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 FER1L5A0AVI2 2057 aa13.11□□□□□ -0.31
TRAPPC11-202ENST00000357207 TRAV30A0A087WSZ9 112 aa13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 DNLZQ5SXM8 178 aa13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 RBPMS2Q6ZRY4 209 aaKnown RBP13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 RNASE7Q9H1E1 156 aaKnown RBP13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 RABAC1Q9UI14 185 aa13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 RFNGQ9Y644 331 aa13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 DIDO1Q9BTC0 2240 aaKnown RBP13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 IZUMO1RA6ND01 250 aa13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 RAMP3O60896 148 aa13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 DNM1P46Q6ZS02 220 aa13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 RTN4RL2Q86UN3 420 aa13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 EAF1Q96JC9 268 aaPredicted RBP13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 GPR179Q6PRD1 2367 aa13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 LOC102723996A0A087X1L8 192 aa13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 LYL1P12980 280 aa13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 NMSQ5H8A3 153 aa13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 TEX38Q6PEX7 206 aa13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 ZIC4Q8N9L1 334 aa13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 UMODP07911 640 aa13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 ANOS1P23352 680 aa13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 ZNF497Q6ZNH5 498 aa13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 RPP25LQ8N5L8 163 aaKnown RBP13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 RALYQ9UKM9 306 aaKnown RBP13.1□□□□□ -0.31
TRAPPC11-202ENST00000357207 WDR81Q562E7 1941 aa13.09□□□□□ -0.31
TRAPPC11-202ENST00000357207 A0A1B0GUT8 65 aa13.09□□□□□ -0.31
TRAPPC11-202ENST00000357207 ERASQ7Z444 233 aa13.09□□□□□ -0.31
TRAPPC11-202ENST00000357207 NIT1Q86X76 327 aa13.09□□□□□ -0.31
TRAPPC11-202ENST00000357207 OSTCQ9NRP0 149 aa13.09□□□□□ -0.31
TRAPPC11-202ENST00000357207 MRPS18CQ9Y3D5 142 aaKnown RBP13.09□□□□□ -0.31
TRAPPC11-202ENST00000357207 ATP1A1-AS1Q5TC04 95 aa13.09□□□□□ -0.31
TRAPPC11-202ENST00000357207 FGFBP3Q8TAT2 258 aa13.09□□□□□ -0.31
TRAPPC11-202ENST00000357207 ZNF414Q96IQ9 312 aa13.09□□□□□ -0.31
TRAPPC11-202ENST00000357207 IGKV1-27A0A075B6S5 117 aa13.09□□□□□ -0.31
TRAPPC11-202ENST00000357207 TMEM171Q8WVE6 324 aa13.09□□□□□ -0.31
TRAPPC11-202ENST00000357207 NABP1Q96AH0 204 aa13.09□□□□□ -0.31
TRAPPC11-202ENST00000357207 GPR6P46095 362 aaPredicted RBP13.08□□□□□ -0.31
TRAPPC11-202ENST00000357207 MST1LQ2TV78 715 aa13.08□□□□□ -0.31
TRAPPC11-202ENST00000357207 PTPRDP23468 1912 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 HEATR5AQ86XA9 2040 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 KBTBD11-OT1A0A1B0GTJ5 212 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 C7orf71A4D174 169 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 HIGD1CA8MV81 97 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 IQCF6A8MYZ5 107 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 GCSAMLQ5JQS6 135 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 GPR82Q96P67 336 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 SOX21Q9Y651 276 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 CGB1A6NKQ9 187 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 IL4P05112 153 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 HTN1P15515 57 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 PSG9Q00887 426 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 SAPCD1Q5SSQ6 148 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 FAM201AQ5SY85 155 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 OR52E5Q8NH55 327 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 DPF1Q92782 380 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 C5orf63A6NC05 138 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 C9JQL5 133 aa13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 ZNF324O75467 553 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 APOHP02749 345 aaPredicted RBP13.08□□□□□ -0.32
TRAPPC11-202ENST00000357207 SNAI2O43623 268 aa13.07□□□□□ -0.32
TRAPPC11-202ENST00000357207 RELQ04864 619 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC11-202ENST00000357207 SRSF7Q16629 238 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAPPC11-202ENST00000357207 ACSF3Q4G176 576 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC11-202ENST00000357207 C16orf92Q96LL3 132 aa13.07□□□□□ -0.32
TRAPPC11-202ENST00000357207 RPP21Q9H633 154 aaKnown RBP13.07□□□□□ -0.32
TRAPPC11-202ENST00000357207 DEPPQ9NTK1 212 aa13.07□□□□□ -0.32
TRAPPC11-202ENST00000357207 SH2D7A6NKC9 451 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC11-202ENST00000357207 CELA3BP08861 270 aa13.07□□□□□ -0.32
TRAPPC11-202ENST00000357207 LTBRP36941 435 aa13.07□□□□□ -0.32
TRAPPC11-202ENST00000357207 CFHR1Q03591 330 aa13.07□□□□□ -0.32
TRAPPC11-202ENST00000357207 SLX1AQ9BQ83 275 aa13.07□□□□□ -0.32
TRAPPC11-202ENST00000357207 CFPP27918 469 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 CADP27708 2225 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 VWA8A3KMH1 1905 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 PPIAL4CA0A0B4J2A2 164 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 YPEL1O60688 119 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 PPIAL4GP0DN37 164 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 CX3CL1P78423 397 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 WFDC3Q8IUB2 231 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 FAM216BQ8N7L0 139 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 YPEL2Q96QA6 119 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 DOCK11Q5JSL3 2073 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 NOTCH3Q9UM47 2321 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 HEATR1Q9H583 2144 aaKnown RBP13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 A0A1W2PRE2 83 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 TIMM23BQ5SRD1 257 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 SMIM12Q96EX1 92 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 METTL26Q96S19 204 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 CLEC7AQ9BXN2 247 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 PNRC2Q9NPJ4 139 aaKnown RBP13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 TM4SF5O14894 197 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 HGFACQ04756 655 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 EFNB3Q15768 340 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 UNQ5815/PRO19632Q6UWF5 114 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 OR10J6PQ8NGY7 276 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 PRELID3AQ96N28 172 aa13.06□□□□□ -0.32
TRAPPC11-202ENST00000357207 CLPSP04118 112 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms