RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 TMEM133Q9H2Q1 129 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 CYSLTR1Q9Y271 337 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 CD7P09564 240 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 HTN3P15516 51 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 CSRP1P21291 193 aaKnown RBP5.43□□□□□ -1.54
UPF2-201ENST00000356352 IFITM3Q01628 133 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 C5orf30Q96GV9 206 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 SLC25A15Q9Y619 301 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 SCN1AP35498 2009 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 F2Z2F3 143 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 ZNHIT1O43257 154 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 SAA1P0DJI8 122 aaPredicted RBP5.43□□□□□ -1.54
UPF2-201ENST00000356352 C21orf62-AS1Q17RA5 79 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 ATOH7Q8N100 152 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 ABHD17AQ96GS6 310 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 GPHA2Q96T91 129 aa5.43□□□□□ -1.54
UPF2-201ENST00000356352 IGHV3OR16-13A0A075B7E8 117 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 IGHV3-74A0A0B4J1X5 117 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 IGHV3-35A0A0C4DH35 117 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 TCRBV4S1A1TA0A5B7 111 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 ZNF324BQ6AW86 544 aaPredicted RBP5.42□□□□□ -1.54
UPF2-201ENST00000356352 RNF125Q96EQ8 232 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 ZNF257Q9Y2Q1 563 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 THSD7AQ9UPZ6 1657 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 TRBV6-7A0A0A0MS04 114 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 TRGV4A0A0C4DH28 118 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 A0A0G2JK05 382 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 PGPEP1LA6NFU8 196 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 NDUFA3O95167 84 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 SRP19P09132 144 aaKnown RBP5.42□□□□□ -1.54
UPF2-201ENST00000356352 RFPL3SP0C7P2 107 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 FOXA3P55318 350 aaPredicted RBP5.42□□□□□ -1.54
UPF2-201ENST00000356352 CCL20P78556 96 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 FAM71F2Q6NXP2 309 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 MIR17HGQ75NE6 70 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 PRADC1Q9BSG0 188 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 SPCS1Q9Y6A9 102 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 MYO16Q9Y6X6 1858 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 ZNF646O15015 1829 aaPredicted RBP5.42□□□□□ -1.54
UPF2-201ENST00000356352 ARID1BQ8NFD5 2236 aaPredicted RBP5.42□□□□□ -1.54
UPF2-201ENST00000356352 SAA2-SAA4A0A096LPE2 208 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 MSGN1A6NI15 193 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 DPM2O94777 84 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 TIAF1O95411 115 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 HBDP02042 147 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 WNT2P09544 360 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 SAA2P0DJI9 122 aaPredicted RBP5.42□□□□□ -1.54
UPF2-201ENST00000356352 PLNP26678 52 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 PAX2Q02962 417 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 MESP2Q0VG99 397 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 MORN3Q6PF18 240 aaPredicted RBP5.42□□□□□ -1.54
UPF2-201ENST00000356352 ZNF525Q8N782 197 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 C18orf12Q96KH6 178 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 SCN4AP35499 1836 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 IGHV3-48P01763 117 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 CTAG1AP78358 180 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 PSG7Q13046 419 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 NIT1Q86X76 327 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 C8orf46Q8TAG6 207 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 SMPXQ9UHP9 88 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 MIA3Q5JRA6 1907 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 IGHV3-49A0A0A0MS15 119 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 A0A1W2PRX2 142 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 E9PLN8 166 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 SRSF7Q16629 238 aaKnown RBP eCLIP5.42□□□□□ -1.54
UPF2-201ENST00000356352 VKORC1Q9BQB6 163 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 OSTCQ9NRP0 149 aa5.42□□□□□ -1.54
UPF2-201ENST00000356352 A0A1W2PRE2 83 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 EPOPA6NHQ4 379 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 CDK2AP2O75956 126 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 OR9G9P0C7N8 305 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 ATP5L2Q7Z4Y8 100 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 UBE2DNLQ8IWF7 75 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 CHCHD1Q96BP2 118 aaKnown RBP5.41□□□□□ -1.54
UPF2-201ENST00000356352 IMMP2LQ96T52 175 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 RTBDNQ9BSG5 229 aaPredicted RBP5.41□□□□□ -1.54
UPF2-201ENST00000356352 SMCHD1A6NHR9 2005 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 STRCP1A6NGW2 1772 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 A0A1B0GV90 55 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 ADARB2-AS1A8MUL3 147 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 HIGD1CA8MV81 97 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 C1QCP02747 245 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 CD28P10747 220 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 ZNF497Q6ZNH5 498 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 LINC00518Q8N0U6 118 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 IMMP1LQ96LU5 166 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 WFDC6Q9BQY6 131 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 SSBP4Q9BWG4 385 aaPredicted RBP5.41□□□□□ -1.54
UPF2-201ENST00000356352 PRDM13Q9H4Q3 707 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 EPDR1Q9UM22 224 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 PDE4DIPQ5VU43 2346 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.41□□□□□ -1.54
UPF2-201ENST00000356352 OOSP1A8MZH6 123 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 CELA3AP09093 270 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 FHITP49789 147 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 PRCDQ00LT1 54 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 CFHR1Q03591 330 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 LINC00114Q6XXX2 140 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 OVOL2Q9BRP0 275 aa5.41□□□□□ -1.54
UPF2-201ENST00000356352 FBLN5Q9UBX5 448 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms