RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 GPR132Q9UNW8 380 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 KLF4O43474 513 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 MBD3L4A6NDZ8 208 aaPredicted RBP9.47□□□□□ -0.89
FN1-204ENST00000356005 MBD3L3A6NE82 208 aaPredicted RBP9.47□□□□□ -0.89
FN1-204ENST00000356005 MBD3L5A6NJ08 208 aaPredicted RBP9.47□□□□□ -0.89
FN1-204ENST00000356005 PEAR1Q5VY43 1037 aaPredicted RBP9.47□□□□□ -0.89
FN1-204ENST00000356005 MBD3L2Q8NHZ7 208 aaPredicted RBP9.47□□□□□ -0.89
FN1-204ENST00000356005 E9PQ18 207 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 CRYBA2P53672 197 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 LINC01590Q5TEZ4 76 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 TMEM252Q8N6L7 170 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 AMELYQ99218 206 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 ZNF106Q9H2Y7 1883 aaKnown RBP9.47□□□□□ -0.89
FN1-204ENST00000356005 TRAV14DV4A0A0A6YYC5 116 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 A0A1W2PP11 408 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 A6NDN8 102 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 PHOX2AO14813 284 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 HLA-DQA1P01909 254 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 IER3P46695 156 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 SLC50A1Q9BRV3 221 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 ZNF257Q9Y2Q1 563 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 C3orf36Q3SXR2 165 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 RPL39P5Q59GN2 51 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 MIC13Q5XKP0 118 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 PLAUP00749 431 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 C2orf83Q53S99 150 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 TEX38Q6PEX7 206 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 FAM169BQ8N8A8 192 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 TEX45Q8NA69 505 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 GPR146Q96CH1 333 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 C1QTNF4Q9BXJ3 329 aa9.47□□□□□ -0.89
FN1-204ENST00000356005 MED19A0JLT2 244 aaPredicted RBP9.46□□□□□ -0.89
FN1-204ENST00000356005 FOXI3A8MTJ6 420 aaPredicted RBP9.46□□□□□ -0.89
FN1-204ENST00000356005 MALP21145 153 aa9.46□□□□□ -0.89
FN1-204ENST00000356005 CDX1P47902 265 aaPredicted RBP9.46□□□□□ -0.89
FN1-204ENST00000356005 WDR82Q6UXN9 313 aa9.46□□□□□ -0.89
FN1-204ENST00000356005 OR4C5Q8NGB2 326 aa9.46□□□□□ -0.89
FN1-204ENST00000356005 SMIM12Q96EX1 92 aa9.46□□□□□ -0.89
FN1-204ENST00000356005 NABP2Q9BQ15 211 aa9.46□□□□□ -0.89
FN1-204ENST00000356005 SIGLEC5O15389 551 aa9.46□□□□□ -0.9
FN1-204ENST00000356005 RBFOX2O43251 390 aaKnown RBP eCLIP9.46□□□□□ -0.91e-8■■■■■ 27.7
FN1-204ENST00000356005 HTN3P15516 51 aa9.46□□□□□ -0.9
FN1-204ENST00000356005 SUMO2P61956 95 aaKnown RBP9.46□□□□□ -0.9
FN1-204ENST00000356005 RFLNBQ8N5W9 214 aa9.46□□□□□ -0.9
FN1-204ENST00000356005 PCNX3Q9H6A9 2034 aa9.46□□□□□ -0.9
FN1-204ENST00000356005 TMEM14DPA8MWL7 114 aa9.46□□□□□ -0.9
FN1-204ENST00000356005 LMX1BO60663 402 aa9.46□□□□□ -0.9
FN1-204ENST00000356005 PVRIGQ6DKI7 326 aa9.46□□□□□ -0.9
FN1-204ENST00000356005 SGMS2Q8NHU3 365 aa9.46□□□□□ -0.9
FN1-204ENST00000356005 RNF166Q96A37 237 aaPredicted RBP9.46□□□□□ -0.9
FN1-204ENST00000356005 RAB37Q96AX2 223 aa9.46□□□□□ -0.9
FN1-204ENST00000356005 F12P00748 615 aaPredicted RBP9.46□□□□□ -0.9
FN1-204ENST00000356005 ERVK11-1P61568 191 aa9.46□□□□□ -0.9
FN1-204ENST00000356005 ZNF818PQ6ZRF7 136 aa9.46□□□□□ -0.9
FN1-204ENST00000356005 GOLT1AQ6ZVE7 132 aa9.46□□□□□ -0.9
FN1-204ENST00000356005 STPG2Q8N412 459 aa9.46□□□□□ -0.9
FN1-204ENST00000356005 MDS2Q8NDY4 140 aa9.46□□□□□ -0.9
FN1-204ENST00000356005 USMG5Q96IX5 58 aa9.46□□□□□ -0.9
FN1-204ENST00000356005 H3BRM9 83 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 RNF224P0DH78 156 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 GTF3AQ92664 365 aaKnown RBP9.45□□□□□ -0.9
FN1-204ENST00000356005 TRBV7-1A0A0A6YYK4 115 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 C12orf77C9JDV5 145 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 CRPP02741 224 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 LGALS3P17931 250 aaKnown RBP9.45□□□□□ -0.9
FN1-204ENST00000356005 ZNF497Q6ZNH5 498 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 FAM24BQ8N5W8 94 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 NUDT10Q8NFP7 164 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 SRSF12Q8WXF0 261 aaKnown RBP9.45□□□□□ -0.9
FN1-204ENST00000356005 FMC1Q96HJ9 113 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 PLXNB1O43157 2135 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 RAMP1O60894 148 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 GGCTO75223 188 aaKnown RBP9.45□□□□□ -0.9
FN1-204ENST00000356005 TBX15Q96SF7 602 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 TRBV9A0A0B4J1U6 114 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 NDUFB4O95168 129 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 RND3P61587 244 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 PRSS53Q2L4Q9 553 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 ZNF600Q6ZNG1 722 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 VMO1Q7Z5L0 202 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 WNT10AQ9GZT5 417 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 IFI27L2Q9H2X8 130 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 DPH3P1Q9H4G8 78 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 CRIM1Q9NZV1 1036 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 NBEAP1P0C6P0 100 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 MRPL20Q9BYC9 149 aaKnown RBP9.45□□□□□ -0.9
FN1-204ENST00000356005 MIXL1Q9H2W2 232 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 TMEM218A2RU14 115 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 TMEM178BH3BS89 294 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 JOSD1Q15040 202 aaPredicted RBP9.45□□□□□ -0.9
FN1-204ENST00000356005 PRELID3AQ96N28 172 aa9.45□□□□□ -0.9
FN1-204ENST00000356005 IGHV1-46P01743 117 aa9.44□□□□□ -0.9
FN1-204ENST00000356005 PAX8Q06710 450 aa9.44□□□□□ -0.9
FN1-204ENST00000356005 H3BQ15 152 aa9.44□□□□□ -0.9
FN1-204ENST00000356005 SAP30O75446 220 aa9.44□□□□□ -0.9
FN1-204ENST00000356005 TMEM250H0YL14 139 aa9.44□□□□□ -0.9
FN1-204ENST00000356005 ZNHIT1O43257 154 aa9.44□□□□□ -0.9
FN1-204ENST00000356005 NPIPB7O75200 414 aa9.44□□□□□ -0.9
FN1-204ENST00000356005 LINC00271P0C7V0 271 aa9.44□□□□□ -0.9
FN1-204ENST00000356005 EMP1P54849 157 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms