RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 SRSF1Q07955 248 aaKnown RBP eCLIP12.53□□□□□ -0.4
LMX1B-201ENST00000355497 EIF4EBP2Q13542 120 aaPredicted RBP12.53□□□□□ -0.4
LMX1B-201ENST00000355497 ASCL2Q99929 193 aa12.53□□□□□ -0.4
LMX1B-201ENST00000355497 FAM216BQ8N7L0 139 aa12.52□□□□□ -0.4
LMX1B-201ENST00000355497 FAM57AQ8TBR7 257 aa12.52□□□□□ -0.4
LMX1B-201ENST00000355497 CD7P09564 240 aa12.52□□□□□ -0.4
LMX1B-201ENST00000355497 ZNF525Q8N782 197 aa12.52□□□□□ -0.4
LMX1B-201ENST00000355497 DPM2O94777 84 aa12.52□□□□□ -0.41
LMX1B-201ENST00000355497 CTSBP07858 339 aa12.52□□□□□ -0.41
LMX1B-201ENST00000355497 TDGF1P3P51864 188 aa12.52□□□□□ -0.41
LMX1B-201ENST00000355497 SCN1AP35498 2009 aa12.52□□□□□ -0.41
LMX1B-201ENST00000355497 IGHV3OR16-8A0A075B7F1 116 aa12.52□□□□□ -0.41
LMX1B-201ENST00000355497 FABP5P3A8MUU1 101 aa12.52□□□□□ -0.41
LMX1B-201ENST00000355497 CECR9P0C854 216 aa12.52□□□□□ -0.41
LMX1B-201ENST00000355497 GNG5P63218 68 aa12.52□□□□□ -0.41
LMX1B-201ENST00000355497 ZNF585BQ52M93 769 aa12.52□□□□□ -0.41
LMX1B-201ENST00000355497 SFTA2Q6UW10 78 aa12.52□□□□□ -0.41
LMX1B-201ENST00000355497 RPL23P62829 140 aaKnown RBP12.51□□□□□ -0.41
LMX1B-201ENST00000355497 STHQ8IWL8 128 aa12.51□□□□□ -0.41
LMX1B-201ENST00000355497 TMEM170AQ8WVE7 144 aa12.51□□□□□ -0.41
LMX1B-201ENST00000355497 SLC50A1Q9BRV3 221 aa12.51□□□□□ -0.41
LMX1B-201ENST00000355497 TRAV2A0A0B4J234 112 aa12.51□□□□□ -0.41
LMX1B-201ENST00000355497 SPRED2Q7Z698 418 aa12.51□□□□□ -0.41
LMX1B-201ENST00000355497 FAM90A1Q86YD7 464 aa12.51□□□□□ -0.41
LMX1B-201ENST00000355497 FAM89BQ8N5H3 189 aa12.51□□□□□ -0.41
LMX1B-201ENST00000355497 A0A1W2PRX2 142 aa12.51□□□□□ -0.41
LMX1B-201ENST00000355497 HBDP02042 147 aa12.51□□□□□ -0.41
LMX1B-201ENST00000355497 ZNF562Q6V9R5 426 aa12.51□□□□□ -0.41
LMX1B-201ENST00000355497 RNASE7Q9H1E1 156 aaKnown RBP12.51□□□□□ -0.41
LMX1B-201ENST00000355497 CHTOPQ9Y3Y2 248 aaKnown RBP12.51□□□□□ -0.41
LMX1B-201ENST00000355497 GATA2P23769 480 aaPredicted RBP12.51□□□□□ -0.41
LMX1B-201ENST00000355497 VKORC1Q9BQB6 163 aa12.51□□□□□ -0.41
LMX1B-201ENST00000355497 PRR32B1ATL7 298 aa12.5□□□□□ -0.41
LMX1B-201ENST00000355497 RAMP1O60894 148 aa12.5□□□□□ -0.41
LMX1B-201ENST00000355497 SP9P0CG40 484 aa12.5□□□□□ -0.41
LMX1B-201ENST00000355497 TMEM167AQ8TBQ9 72 aa12.5□□□□□ -0.41
LMX1B-201ENST00000355497 A8MXK9 166 aa12.5□□□□□ -0.41
LMX1B-201ENST00000355497 GGTLC3B5MD39 225 aa12.5□□□□□ -0.41
LMX1B-201ENST00000355497 FAM201AQ5SY85 155 aa12.5□□□□□ -0.41
LMX1B-201ENST00000355497 COQ2Q96H96 371 aa12.5□□□□□ -0.41
LMX1B-201ENST00000355497 LINC00312Q9Y6C7 94 aa12.5□□□□□ -0.41
LMX1B-201ENST00000355497 ZIC4Q8N9L1 334 aa12.5□□□□□ -0.41
LMX1B-201ENST00000355497 ZNFX1Q9P2E3 1918 aaKnown RBP12.5□□□□□ -0.41
LMX1B-201ENST00000355497 MYOD1P15172 320 aa12.5□□□□□ -0.41
LMX1B-201ENST00000355497 GFI1BQ5VTD9 330 aa12.5□□□□□ -0.41
LMX1B-201ENST00000355497 C1orf162Q8NEQ5 155 aaPredicted RBP12.5□□□□□ -0.41
LMX1B-201ENST00000355497 BSPH1Q075Z2 132 aa12.5□□□□□ -0.41
LMX1B-201ENST00000355497 FAM27E3Q08E93 113 aa12.5□□□□□ -0.41
LMX1B-201ENST00000355497 FAM168AQ92567 244 aa12.5□□□□□ -0.41
LMX1B-201ENST00000355497 IGHV3-11P01762 117 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 PVRIGQ6DKI7 326 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 C18orf12Q96KH6 178 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 CYSLTR1Q9Y271 337 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 IGHV2OR16-5A0A0B4J2B6 119 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 LDLRAD2Q5SZI1 272 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 PPP1R32Q7Z5V6 425 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 JMJD8Q96S16 334 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 C1QTNF5Q9BXJ0 243 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 CCL20P78556 96 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 ATXN8Q156A1 80 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 RSPO4Q2I0M5 234 aaPredicted RBP12.49□□□□□ -0.41
LMX1B-201ENST00000355497 GLMPQ8WWB7 406 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 SPSB2Q99619 263 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 CD28P10747 220 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 GAGE2EQ4V326 116 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 FBLN7Q53RD9 439 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 C19orf48Q6RUI8 117 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 GAGE2DQ9UEU5 116 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 CRPP02741 224 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 RFPL3SP0C7P2 107 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 TMEM249Q2WGJ8 235 aa12.49□□□□□ -0.41
LMX1B-201ENST00000355497 TRAV9-2A0A087WT02 112 aa12.48□□□□□ -0.41
LMX1B-201ENST00000355497 UPK2O00526 184 aa12.48□□□□□ -0.41
LMX1B-201ENST00000355497 NBR2O15453 112 aa12.48□□□□□ -0.41
LMX1B-201ENST00000355497 DUSP14O95147 198 aaKnown RBP12.48□□□□□ -0.41
LMX1B-201ENST00000355497 IGKCP01834 107 aa12.48□□□□□ -0.41
LMX1B-201ENST00000355497 VDAC2P45880 294 aaPredicted RBP12.48□□□□□ -0.41
LMX1B-201ENST00000355497 HIST1H4AP62805 103 aaKnown RBP12.48□□□□□ -0.41
LMX1B-201ENST00000355497 ORMDL2Q53FV1 153 aa12.48□□□□□ -0.41
LMX1B-201ENST00000355497 SMCHD1A6NHR9 2005 aa12.48□□□□□ -0.41
LMX1B-201ENST00000355497 QSER1Q2KHR3 1735 aa12.48□□□□□ -0.41
LMX1B-201ENST00000355497 NRN1LQ496H8 165 aa12.48□□□□□ -0.41
LMX1B-201ENST00000355497 TMEM144Q7Z5S9 345 aa12.48□□□□□ -0.41
LMX1B-201ENST00000355497 CHCHD2Q9Y6H1 151 aaPredicted RBP12.48□□□□□ -0.41
LMX1B-201ENST00000355497 FOCADQ5VW36 1801 aa12.48□□□□□ -0.41
LMX1B-201ENST00000355497 A8MWV9 139 aa12.48□□□□□ -0.41
LMX1B-201ENST00000355497 PLNP26678 52 aa12.48□□□□□ -0.41
LMX1B-201ENST00000355497 COLCA1Q6ZS62 124 aa12.48□□□□□ -0.41
LMX1B-201ENST00000355497 VGLL1Q99990 258 aa12.48□□□□□ -0.41
LMX1B-201ENST00000355497 FDCSPQ8NFU4 85 aa12.48□□□□□ -0.41
LMX1B-201ENST00000355497 ORAOV1Q8WV07 137 aa12.48□□□□□ -0.41
LMX1B-201ENST00000355497 NHSL1Q5SYE7 1610 aa12.48□□□□□ -0.41
LMX1B-201ENST00000355497 TMEM155Q4W5P6 130 aa12.47□□□□□ -0.41
LMX1B-201ENST00000355497 SIGLEC12Q96PQ1 595 aa12.47□□□□□ -0.41
LMX1B-201ENST00000355497 C7orf69Q9H7B7 122 aa12.47□□□□□ -0.41
LMX1B-201ENST00000355497 SCN3AQ9NY46 2000 aa12.47□□□□□ -0.41
LMX1B-201ENST00000355497 SAA2-SAA4A0A096LPE2 208 aa12.47□□□□□ -0.41
LMX1B-201ENST00000355497 A0A0G2JK05 382 aa12.47□□□□□ -0.41
LMX1B-201ENST00000355497 RNF222A6NCQ9 220 aa12.47□□□□□ -0.41
LMX1B-201ENST00000355497 SAA2P0DJI9 122 aaPredicted RBP12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms