RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 IGHV3-48P01763 117 aa10.71□□□□□ -0.69
SYNCRIP-201ENST00000355238 CACNG7P62955 275 aa10.71□□□□□ -0.69
SYNCRIP-201ENST00000355238 SRSF4Q08170 494 aaKnown RBP10.71□□□□□ -0.69
SYNCRIP-201ENST00000355238 A8MWP6 167 aa10.71□□□□□ -0.69
SYNCRIP-201ENST00000355238 IGKCP01834 107 aa10.71□□□□□ -0.69
SYNCRIP-201ENST00000355238 PRR33A8MZF0 331 aa10.71□□□□□ -0.7
SYNCRIP-201ENST00000355238 FSCN3Q9NQT6 498 aa10.71□□□□□ -0.7
SYNCRIP-201ENST00000355238 NPFFO15130 113 aa10.71□□□□□ -0.7
SYNCRIP-201ENST00000355238 NRN1LQ496H8 165 aa10.71□□□□□ -0.7
SYNCRIP-201ENST00000355238 C1orf53Q5VUE5 145 aa10.71□□□□□ -0.7
SYNCRIP-201ENST00000355238 IGKV1D-43A0A0B4J1Z2 117 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 ACP7Q6ZNF0 438 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 IGKV3D-15A0A087WSY6 115 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 ZNHIT1O43257 154 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 IGKV3-15P01624 115 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 CCL1P22362 96 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 SLC22A18ASQ8N1D0 253 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 DNASE2BQ8WZ79 361 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 EPDR1Q9UM22 224 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 IFI27L1Q96BM0 104 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 CELA2AP08217 269 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 LINC00271P0C7V0 271 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 LHFPL1Q86WI0 220 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 EEF1AKMT3Q96AZ1 226 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 DUSP15Q9H1R2 295 aaPredicted RBP10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 SEMA5BQ9P283 1151 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 WDR83OSQ9Y284 106 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 AHRRA9YTQ3 701 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 FOXL2P58012 376 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 PAQR4Q8N4S7 273 aaPredicted RBP10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 TMEM190Q8WZ59 177 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 SPANXA1Q9NS26 97 aa10.7□□□□□ -0.7
SYNCRIP-201ENST00000355238 C9JCJ5 164 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 SCARF2Q96GP6 870 aaPredicted RBP10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 C1QTNF5Q9BXJ0 243 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 NCOR1P1Q9H4R4 102 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 M0R381 172 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 TM4SF5O14894 197 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 ATP5G2Q06055 141 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 LOXL4Q96JB6 756 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 CLEC7AQ9BXN2 247 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 SRSF1Q07955 248 aaKnown RBP eCLIP10.69□□□□□ -0.72e-6■■□□□ 13.7
SYNCRIP-201ENST00000355238 RRN3P1Q2M238 152 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 FAM106AQ4KMX7 169 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 OR5AN1Q8NGI8 311 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 IGKV1D-13A0A0B4J2D9 117 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 IGKV1-13P0DP09 117 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 LINC01551Q86U37 167 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 OR10W1Q8NGF6 305 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 CFHR5Q9BXR6 569 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 EREGO14944 169 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 ADCYAP1P18509 176 aa10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 C11orf68Q9H3H3 251 aaKnown RBP10.69□□□□□ -0.7
SYNCRIP-201ENST00000355238 GAGE12BA1L429 117 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 FAM90A9PA6NNJ1 464 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 COX11Q9Y6N1 276 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 C5orf67F2Z3F1 127 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 PF4V1P10720 104 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 PAX2Q02962 417 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 PMS2CLQ68D20 193 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 TMEM256Q8N2U0 113 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 CRISPLD2Q9H0B8 497 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 VSIRQ9H7M9 311 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 MRPL27Q9P0M9 148 aaKnown RBP10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 CD5LO43866 347 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 RAX2Q96IS3 184 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 VKORC1Q9BQB6 163 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 YAE1D1Q9NRH1 226 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 IGHV4-39P01824 125 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 MST1P26927 711 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 EFNB3Q15768 340 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 LY96Q9Y6Y9 160 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 SPTBP11277 2137 aa10.68□□□□□ -0.7
SYNCRIP-201ENST00000355238 SPAG8Q99932 426 aaPredicted RBP10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 C20orf144Q9BQM9 153 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 REPIN1Q9BWE0 567 aaKnown RBP10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 KBTBD11-OT1A0A1B0GTJ5 212 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 CEACAM4O75871 244 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 IGHV2-70P01814 119 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 SRSF7Q16629 238 aaKnown RBP eCLIP10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 GTSF1LQ9H1H1 148 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 MYO16Q9Y6X6 1858 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 COL24A1Q17RW2 1714 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 CD55P08174 381 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 C3orf79P0CE67 100 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 ORMDL2Q53FV1 153 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 MPV17L2Q567V2 206 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 PILRBQ9UKJ0 227 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 PPIAL4CA0A0B4J2A2 164 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 C15orf61A6NNL5 157 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 LYPD3O95274 346 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 PPIAL4GP0DN37 164 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 PSG1P11464 419 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 LYL1P12980 280 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 SUPT4H1P63272 117 aaKnown RBP10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 ASCL2Q99929 193 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 TNFRSF18Q9Y5U5 241 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 STRCP1A6NGW2 1772 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 LINC01549A6NIU2 74 aa10.67□□□□□ -0.7
SYNCRIP-201ENST00000355238 FABP5P3A8MUU1 101 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms