RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 IGHV3-43DP0DP04 118 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 COX5AP20674 150 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 PLP1P60201 277 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 SERF2P84101 59 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 NRN1LQ496H8 165 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 SP5Q6BEB4 398 aaPredicted RBP7.8□□□□□ -1.16
SMG6-202ENST00000354901 Q6ZS49 121 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 DOLPP1Q86YN1 238 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 MMD2Q8IY49 270 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 CNEP1R1Q8N9A8 125 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 OR1L1Q8NH94 360 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 OR2T6Q8NHC8 308 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 RAB40CQ96S21 281 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 GCM1Q9NP62 436 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 OBP2BQ9NPH6 170 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 TRBV20OR9-2A0A075B6H5 130 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 TRAV9-2A0A087WT02 112 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 DEFB108AA8MXU0 73 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 C21orf140B9A014 251 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 AGFG2O95081 481 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 IGHV3-13P01766 116 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 IGHV3-7P01780 117 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 RAB31Q13636 194 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 DRAM1Q8N682 238 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 SLC25A40Q8TBP6 338 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 RTL8AQ9BWD3 113 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 QTRT1Q9BXR0 403 aaKnown RBP7.8□□□□□ -1.16
SMG6-202ENST00000354901 SPRY4Q9C004 299 aa7.8□□□□□ -1.16
SMG6-202ENST00000354901 H3BUT2 72 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 RAMP3O60896 148 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 AZU1P20160 251 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 NPY1RP25929 384 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 SSTR5P35346 364 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 G6PCP35575 357 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 AESQ08117 197 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 TBC1D28Q2M2D7 210 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 LRRC10Q5BKY1 277 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 Q6P435 159 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 KIR3DL3Q8N743 410 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 C5orf17Q8NAS9 161 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 NHLRC2Q8NBF2 726 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 PCNX1Q96RV3 2341 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 KLRC4-KLRK1H3BQV0 150 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 CDX4O14627 284 aaPredicted RBP7.79□□□□□ -1.16
SMG6-202ENST00000354901 IGLV2-14P01704 120 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 RNPS1Q15287 305 aaKnown RBP7.79□□□□□ -1.16
SMG6-202ENST00000354901 RPEL1Q2QD12 228 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 MORN2Q502X0 79 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 ZNF585BQ52M93 769 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 RNASE7Q9H1E1 156 aaKnown RBP7.79□□□□□ -1.16
SMG6-202ENST00000354901 OR2D2Q9H210 308 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 PLSCR4Q9NRQ2 329 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 SPRR3Q9UBC9 169 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 TNRC6AQ8NDV7 1962 aaKnown RBP7.79□□□□□ -1.16
SMG6-202ENST00000354901 TRGV5A0A0B4J1U4 118 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 C7orf71A4D174 169 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 PSPNO60542 156 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 VENTXO95231 258 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 TIMP3P35625 211 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 CAMPP49913 170 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 TMEM177Q53S58 311 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 FGFRL1Q8N441 504 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 TSKUQ8WUA8 353 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 SSBP3Q9BWW4 388 aaPredicted RBP7.79□□□□□ -1.16
SMG6-202ENST00000354901 HINT2Q9BX68 163 aa7.79□□□□□ -1.16
SMG6-202ENST00000354901 ZFHX4Q86UP3 3567 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 FAM231BA6NCW3 169 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 OR4C46A6NHA9 309 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 A6NJY4 79 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 TNXAQ16473 311 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 TM4SF20Q53R12 229 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 BVES-AS1Q5T3Y7 98 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 MUC15Q8N387 334 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 OR4F17Q8NGA8 305 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 FAM234AQ9H0X4 552 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 KLF13Q9Y2Y9 288 aaPredicted RBP7.78□□□□□ -1.16
SMG6-202ENST00000354901 PLCE1Q9P212 2302 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 K7EQM0 130 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 SS18L1O75177 396 aaPredicted RBP7.78□□□□□ -1.16
SMG6-202ENST00000354901 MPV17P39210 176 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 YPEL3P61236 119 aaPredicted RBP7.78□□□□□ -1.16
SMG6-202ENST00000354901 RBPJQ06330 500 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 FOXL1Q12952 345 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 SSX8Q7RTT4 187 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 CITED1Q99966 193 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 PSMG3Q9BT73 122 aaPredicted RBP7.78□□□□□ -1.16
SMG6-202ENST00000354901 CDC42EP3Q9UKI2 254 aa7.78□□□□□ -1.16
SMG6-202ENST00000354901 TPRP12270 2363 aaKnown RBP7.78□□□□□ -1.16
SMG6-202ENST00000354901 C17orf112F2Z3M2 114 aa7.77□□□□□ -1.16
SMG6-202ENST00000354901 UBE2G1P62253 170 aa7.77□□□□□ -1.16
SMG6-202ENST00000354901 ZNF788Q6ZQV5 615 aa7.77□□□□□ -1.16
SMG6-202ENST00000354901 TMEM116Q8NCL8 245 aa7.77□□□□□ -1.16
SMG6-202ENST00000354901 OR8B3Q8NGG8 313 aa7.77□□□□□ -1.16
SMG6-202ENST00000354901 ABHD14BQ96IU4 210 aa7.77□□□□□ -1.16
SMG6-202ENST00000354901 DCTN5Q9BTE1 182 aa7.77□□□□□ -1.16
SMG6-202ENST00000354901 SSBP4Q9BWG4 385 aaPredicted RBP7.77□□□□□ -1.16
SMG6-202ENST00000354901 LIN7CQ9NUP9 197 aaKnown RBP7.77□□□□□ -1.16
SMG6-202ENST00000354901 IL36BQ9NZH7 164 aa7.77□□□□□ -1.16
SMG6-202ENST00000354901 ESDP10768 282 aa7.77□□□□□ -1.17
SMG6-202ENST00000354901 LGALS7P47929 136 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms