RNA–Protein interactions for RNA: ENST00000354363.10

PRPF40A-201, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 1,622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-201ENST00000354363 DBX1A6NMT0 343 aa10.71□□□□□ -0.69
PRPF40A-201ENST00000354363 GPR31O00270 319 aa10.71□□□□□ -0.69
PRPF40A-201ENST00000354363 UBE2CO00762 179 aa10.71□□□□□ -0.69
PRPF40A-201ENST00000354363 ZNF207O43670 478 aaKnown RBP10.71□□□□□ -0.69
PRPF40A-201ENST00000354363 BMI1P35226 326 aa10.71□□□□□ -0.69
PRPF40A-201ENST00000354363 RPS19P39019 145 aaKnown RBP10.71□□□□□ -0.69
PRPF40A-201ENST00000354363 KCTD21Q4G0X4 260 aa10.71□□□□□ -0.69
PRPF40A-201ENST00000354363 CMTM1Q8IZ96 169 aa10.71□□□□□ -0.69
PRPF40A-201ENST00000354363 SAMD12Q8N8I0 201 aa10.71□□□□□ -0.69
PRPF40A-201ENST00000354363 UBAC2Q8NBM4 344 aa10.71□□□□□ -0.69
PRPF40A-201ENST00000354363 TSPAN14Q8NG11 270 aa10.71□□□□□ -0.69
PRPF40A-201ENST00000354363 ZNF414Q96IQ9 312 aa10.71□□□□□ -0.69
PRPF40A-201ENST00000354363 PRNDQ9UKY0 176 aa10.71□□□□□ -0.69
PRPF40A-201ENST00000354363 KIR2DL5BA0A0G2JN68 375 aa10.7□□□□□ -0.7
PRPF40A-201ENST00000354363 KIR2DL5BA0A0G2JPC4 375 aa10.7□□□□□ -0.7
PRPF40A-201ENST00000354363 CTSDP07339 412 aaPredicted RBP10.7□□□□□ -0.7
PRPF40A-201ENST00000354363 Q56UQ5 140 aa10.7□□□□□ -0.7
PRPF40A-201ENST00000354363 LYSMD2Q8IV50 215 aa10.7□□□□□ -0.7
PRPF40A-201ENST00000354363 KIR2DL5AQ8N109 375 aa10.7□□□□□ -0.7
PRPF40A-201ENST00000354363 OR6F1Q8NGZ6 308 aa10.7□□□□□ -0.7
PRPF40A-201ENST00000354363 OR5B3Q8NH48 314 aa10.7□□□□□ -0.7
PRPF40A-201ENST00000354363 KIR2DL5BQ8NHK3 375 aa10.7□□□□□ -0.7
PRPF40A-201ENST00000354363 TMEM56Q96MV1 263 aa10.7□□□□□ -0.7
PRPF40A-201ENST00000354363 TMEM14BQ9NUH8 114 aa10.7□□□□□ -0.7
PRPF40A-201ENST00000354363 FKBP11Q9NYL4 201 aa10.7□□□□□ -0.7
PRPF40A-201ENST00000354363 NUPR2A6NF83 97 aa10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 OR4C46A6NHA9 309 aa10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 C15orf61A6NNL5 157 aa10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 C15orf62A8K5M9 175 aa10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 CTSGP08311 255 aa10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 RPL35AP18077 110 aaKnown RBP10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 PRSS3P35030 304 aa10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 HRH1P35367 487 aa10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 STPG3Q8N7X2 389 aa10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 RNF183Q96D59 192 aa10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 LY6G6CO95867 125 aa10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 HLA-DMAP28067 261 aa10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 LSM3P62310 102 aaKnown RBP10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 PHLDA2Q53GA4 152 aa10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 OR1P1Q8NH06 330 aa10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 YIPF6Q96EC8 236 aa10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 GALNT14Q96FL9 552 aa10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 TSC22D3Q99576 134 aa10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 FAM212BQ9NTI7 297 aaPredicted RBP10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 SMPXQ9UHP9 88 aa10.69□□□□□ -0.7
PRPF40A-201ENST00000354363 ATF4P18848 351 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-201ENST00000354363 CEMP1Q6PRD7 247 aaPredicted RBP10.68□□□□□ -0.7
PRPF40A-201ENST00000354363 GPX8Q8TED1 209 aa10.68□□□□□ -0.7
PRPF40A-201ENST00000354363 SEC22AQ96IW7 307 aa10.68□□□□□ -0.7
PRPF40A-201ENST00000354363 RNF2Q99496 336 aa10.68□□□□□ -0.7
PRPF40A-201ENST00000354363 MAP6D1Q9H9H5 199 aa10.68□□□□□ -0.7
PRPF40A-201ENST00000354363 FRAS1Q86XX4 4008 aa10.67□□□□□ -0.7
PRPF40A-201ENST00000354363 IGHV7-4-1A0A0J9YVY3 117 aa10.67□□□□□ -0.7
PRPF40A-201ENST00000354363 I3L2K1 104 aa10.67□□□□□ -0.7
PRPF40A-201ENST00000354363 CHEK1O14757 476 aa10.67□□□□□ -0.7
PRPF40A-201ENST00000354363 NUPL2O15504 423 aaKnown RBP10.67□□□□□ -0.7
PRPF40A-201ENST00000354363 EIF4EP06730 217 aaKnown RBP10.67□□□□□ -0.7
PRPF40A-201ENST00000354363 FCGR2BP31994 310 aaPredicted RBP10.67□□□□□ -0.7
PRPF40A-201ENST00000354363 RELQ04864 619 aaPredicted RBP10.67□□□□□ -0.7
PRPF40A-201ENST00000354363 TBC1D26Q86UD7 250 aa10.67□□□□□ -0.7
PRPF40A-201ENST00000354363 TMEM116Q8NCL8 245 aa10.67□□□□□ -0.7
PRPF40A-201ENST00000354363 SLC25A46Q96AG3 418 aa10.67□□□□□ -0.7
PRPF40A-201ENST00000354363 MISP3Q96FF7 219 aa10.67□□□□□ -0.7
PRPF40A-201ENST00000354363 RHPN1-AS1Q9BWJ2 59 aa10.67□□□□□ -0.7
PRPF40A-201ENST00000354363 IGKV1-39P01597 117 aa10.66□□□□□ -0.7
PRPF40A-201ENST00000354363 IGKV1D-39P04432 117 aa10.66□□□□□ -0.7
PRPF40A-201ENST00000354363 S100GP29377 79 aa10.66□□□□□ -0.7
PRPF40A-201ENST00000354363 MFAP4P55083 255 aa10.66□□□□□ -0.7
PRPF40A-201ENST00000354363 TSPAN5P62079 268 aa10.66□□□□□ -0.7
PRPF40A-201ENST00000354363 ZNF124Q15973 351 aa10.66□□□□□ -0.7
PRPF40A-201ENST00000354363 LPCAT3Q6P1A2 487 aa10.66□□□□□ -0.7
PRPF40A-201ENST00000354363 APRG1Q8IVJ8 170 aa10.66□□□□□ -0.7
PRPF40A-201ENST00000354363 OR10C1Q96KK4 312 aa10.66□□□□□ -0.7
PRPF40A-201ENST00000354363 IGHV3-49A0A0A0MS15 119 aa10.66□□□□□ -0.7
PRPF40A-201ENST00000354363 MT-CO2P00403 227 aa10.66□□□□□ -0.7
PRPF40A-201ENST00000354363 PRCDQ00LT1 54 aa10.66□□□□□ -0.7
PRPF40A-201ENST00000354363 H2BFWTQ7Z2G1 175 aa10.66□□□□□ -0.7
PRPF40A-201ENST00000354363 ZNF114Q8NC26 417 aa10.66□□□□□ -0.7
PRPF40A-201ENST00000354363 OR4A16Q8NH70 328 aa10.66□□□□□ -0.7
PRPF40A-201ENST00000354363 TXN2Q99757 166 aa10.66□□□□□ -0.7
PRPF40A-201ENST00000354363 NXF2Q9GZY0 626 aaKnown RBP10.66□□□□□ -0.7
PRPF40A-201ENST00000354363 AGRNO00468 2067 aa10.65□□□□□ -0.7
PRPF40A-201ENST00000354363 YIF1AO95070 293 aa10.65□□□□□ -0.7
PRPF40A-201ENST00000354363 IGHV3-48P01763 117 aa10.65□□□□□ -0.7
PRPF40A-201ENST00000354363 TFPI2P48307 235 aa10.65□□□□□ -0.7
PRPF40A-201ENST00000354363 UCP3P55916 312 aa10.65□□□□□ -0.7
PRPF40A-201ENST00000354363 FAM90A2PQ658T7 463 aa10.65□□□□□ -0.7
PRPF40A-201ENST00000354363 MRGPRFQ96AM1 343 aa10.65□□□□□ -0.7
PRPF40A-201ENST00000354363 C6orf62Q9GZU0 229 aaPredicted RBP10.65□□□□□ -0.7
PRPF40A-201ENST00000354363 COMMD3Q9UBI1 195 aa10.65□□□□□ -0.7
PRPF40A-201ENST00000354363 KLK5Q9Y337 293 aaPredicted RBP10.65□□□□□ -0.7
PRPF40A-201ENST00000354363 IGKV3-7A0A075B6H7 116 aa10.64□□□□□ -0.71
PRPF40A-201ENST00000354363 TRAV14DV4A0A0A6YYC5 116 aa10.64□□□□□ -0.71
PRPF40A-201ENST00000354363 CMC4P56277 68 aaPredicted RBP10.64□□□□□ -0.71
PRPF40A-201ENST00000354363 HSPE1P61604 102 aaKnown RBP10.64□□□□□ -0.71
PRPF40A-201ENST00000354363 SNX29P2Q8IUI4 249 aa10.64□□□□□ -0.71
PRPF40A-201ENST00000354363 TMEM217Q8N7C4 229 aa10.64□□□□□ -0.71
PRPF40A-201ENST00000354363 CSTL1Q9H114 145 aa10.64□□□□□ -0.71
PRPF40A-201ENST00000354363 SCPEP1Q9HB40 452 aa10.64□□□□□ -0.71
PRPF40A-201ENST00000354363 IGHV3OR16-13A0A075B7E8 117 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms