RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 TTC9CQ8N5M4 171 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 ELOVL5Q9NYP7 299 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 TRAV2A0A0B4J234 112 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 SAMD13Q5VXD3 122 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 TMEM45BQ96B21 275 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 ASCL2Q99929 193 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 TMEM222Q9H0R3 208 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 LSM4Q9Y4Z0 139 aaKnown RBP8.44□□□□□ -1.06
COL11A1-201ENST00000353414 CACNA1GO43497 2377 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 SEC11BP0C7V7 166 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 FAM19A2Q8N3H0 131 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 CRIM1Q9NZV1 1036 aa8.44□□□□□ -1.06
COL11A1-201ENST00000353414 FAM74A7A6NL05 159 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 CTDSPLO15194 276 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 STAG3L3P0CL85 134 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 LEPP41159 167 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 H1FOOQ8IZA3 346 aaPredicted RBP8.43□□□□□ -1.06
COL11A1-201ENST00000353414 C9orf106Q8NAJ2 232 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 ZNF48Q96MX3 618 aaPredicted RBP8.43□□□□□ -1.06
COL11A1-201ENST00000353414 KCNE5Q9UJ90 142 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 CD8AP01732 235 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 ACP7Q6ZNF0 438 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 ANAPC13Q9BS18 74 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 CST9LQ9H4G1 147 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 ADARB2-AS1A8MUL3 147 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 DDTP30046 118 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 LINC00158P58513 81 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 NDPQ00604 133 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 COPS9Q8WXC6 57 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 TMEM186Q96B77 213 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 CEACAM1P13688 526 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 MEF2CQ06413 473 aaPredicted RBP8.43□□□□□ -1.06
COL11A1-201ENST00000353414 PSMG4Q5JS54 123 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 SSC4DQ8WTU2 575 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 PRELID3AQ96N28 172 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 MEGF9Q9H1U4 602 aa8.43□□□□□ -1.06
COL11A1-201ENST00000353414 BRCA1P38398 1863 aaKnown RBP8.43□□□□□ -1.06
COL11A1-201ENST00000353414 LINC00614P0C842 121 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 SURF2Q15527 256 aaPredicted RBP8.42□□□□□ -1.06
COL11A1-201ENST00000353414 DPM3Q9P2X0 92 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 GREB1Q4ZG55 1949 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 AGAP20933 346 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 P2RY4P51582 365 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 HIST1H4AP62805 103 aaKnown RBP8.42□□□□□ -1.06
COL11A1-201ENST00000353414 GATD1Q8NB37 220 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 SP7Q8TDD2 431 aaPredicted RBP8.42□□□□□ -1.06
COL11A1-201ENST00000353414 ZNF414Q96IQ9 312 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 CADP27708 2225 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 ZNF98A6NK75 572 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 UMODP07911 640 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 HMGA2P52926 109 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 ZP1P60852 638 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 RPS20P60866 119 aaKnown RBP8.42□□□□□ -1.06
COL11A1-201ENST00000353414 S100A7L2Q5SY68 101 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 ZNF146Q15072 292 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 TMEM155Q4W5P6 130 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 ZNF625Q96I27 306 aaPredicted RBP8.42□□□□□ -1.06
COL11A1-201ENST00000353414 INS-IGF2F8WCM5 200 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 ATP5LO75964 103 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 INSP01308 110 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 IL6RP08887 468 aaPredicted RBP8.42□□□□□ -1.06
COL11A1-201ENST00000353414 GALP22466 123 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 FAM181AQ8N9Y4 354 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 C21orf62Q9NYP8 219 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 KIF26BQ2KJY2 2108 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 A0A0G2JLM5 398 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 NPIPB8E9PQR5 432 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 NPIPB9F8W1W9 429 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 IFNL4K9M1U5 179 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 NPIPB7O75200 414 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 GZMBP10144 247 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 TMEM249Q2WGJ8 235 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 FAM110DQ8TAY7 271 aaPredicted RBP8.42□□□□□ -1.06
COL11A1-201ENST00000353414 ZNF837Q96EG3 531 aaPredicted RBP8.42□□□□□ -1.06
COL11A1-201ENST00000353414 PRSS22Q9GZN4 317 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 SBF1O95248 1867 aa8.42□□□□□ -1.06
COL11A1-201ENST00000353414 SCN5AQ14524 2016 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 ZNF729A6NN14 1252 aaPredicted RBP8.41□□□□□ -1.06
COL11A1-201ENST00000353414 C17orf98A8MV24 154 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 LY6HO94772 140 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 HOXA5P20719 270 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 PAX2Q02962 417 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 ZNF329Q86UD4 541 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 RPRMQ9NS64 109 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 CDC42EP3Q9UKI2 254 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 GCHFRP30047 84 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 SRSF6Q13247 344 aaKnown RBP8.41□□□□□ -1.06
COL11A1-201ENST00000353414 SPACA3Q8IXA5 215 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 OR5P3Q8WZ94 311 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 SSBP4Q9BWG4 385 aaPredicted RBP8.41□□□□□ -1.06
COL11A1-201ENST00000353414 SPCS1Q9Y6A9 102 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 COX11Q9Y6N1 276 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 H3BRM9 83 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 CA11O75493 328 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 SCAND1P57086 179 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 ASPHD2Q6ICH7 369 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 PLAC1Q9HBJ0 212 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 FAM206AQ9NX38 181 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 CLDN16Q9Y5I7 305 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 PHF3Q92576 2039 aaKnown RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms