RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 CBLN4Q9NTU7 201 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 IL19Q9UHD0 177 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 POLR3KQ9Y2Y1 108 aaPredicted RBP7.04□□□□□ -1.28
TRIM55-204ENST00000353317 SCO2A0A1W2PP80 73 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 TCAPO15273 167 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 CD3EP07766 207 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 CD33P20138 364 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 HNF1AP20823 631 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 ADMP35318 185 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 VKORC1L1Q8N0U8 176 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 Q8TCH9 128 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 MGST2Q99735 147 aa7.04□□□□□ -1.28
TRIM55-204ENST00000353317 GRIFINA4D1Z8 144 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 PRSS46E5RG02 174 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 F6UZH7 168 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 C15orf65H3BRN8 121 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 FCGR3BO75015 233 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 STAG3L2P0CL84 134 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 STAG3L3P0CL85 134 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 DUTP33316 252 aaKnown RBP7.03□□□□□ -1.28
TRIM55-204ENST00000353317 OPRK1P41145 380 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 ERVFC1-1P60608 527 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 AARDQ4LEZ3 155 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 UTF1Q5T230 341 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 C1orf194Q5T5A4 169 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 MIC13Q5XKP0 118 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 FAM90A1Q86YD7 464 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 DEFB108BQ8NET1 73 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 OCC1Q8TAD7 63 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 MS4A5Q9H3V2 200 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 TP53TG3Q9ULZ0 132 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 MDFIC2A0A1B0GVS7 189 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 LYNX1G3V0Z9 82 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 MPDU1O75352 247 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 LY6HO94772 140 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 LYNX1P0DP58 116 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 PRDX2P32119 198 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 YPEL3P61236 119 aaPredicted RBP7.03□□□□□ -1.28
TRIM55-204ENST00000353317 ABHD12Q8N2K0 398 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 ZNF843Q8N446 348 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 C1orf159Q96HA4 380 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 MS4A10Q96PG2 267 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 GGTLC1Q9BX51 225 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 FAM234AQ9H0X4 552 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 NGBQ9NPG2 151 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 NAGKQ9UJ70 344 aa7.03□□□□□ -1.28
TRIM55-204ENST00000353317 TRAV3A0A0B4J244 114 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 KIR2DL5BA0A0G2JN68 375 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 KIR2DL5BA0A0G2JPC4 375 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 IGHV3-7P01780 117 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 ADH4P08319 380 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 APOBEC3AP31941 199 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-204ENST00000353317 VDAC2P45880 294 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-204ENST00000353317 THBS3P49746 956 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 LINC00310P59036 64 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 SELENOVP59797 346 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 EDDM3AQ14507 147 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 ZNF672Q499Z4 452 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-204ENST00000353317 PDLIM3Q53GG5 364 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-204ENST00000353317 PRAMEF5Q5TYX0 476 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 KIR2DL5AQ8N109 375 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 BTF3L4Q96K17 158 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 HEYLQ9NQ87 328 aaPredicted RBP7.02□□□□□ -1.29
TRIM55-204ENST00000353317 YTHDF2Q9Y5A9 579 aaKnown RBP7.02□□□□□ -1.29
TRIM55-204ENST00000353317 FBN2P35556 2912 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 SOX15O60248 233 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 CXorf1O96002 111 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 HPRT1P00492 218 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 CBLN1P23435 193 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 GPR12P47775 334 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 HTD2P86397 168 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 SRSF1Q07955 248 aaKnown RBP eCLIP7.02□□□□□ -1.29
TRIM55-204ENST00000353317 HLA-DRB5Q30154 266 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 MALRD1Q5VYJ5 2156 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 OR4A16Q8NH70 328 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 FAM222BQ8WU58 562 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 SSMEM1Q8WWF3 244 aa7.02□□□□□ -1.29
TRIM55-204ENST00000353317 SEPSECSQ9HD40 501 aaKnown RBP7.02□□□□□ -1.29
TRIM55-204ENST00000353317 TENM4Q6N022 2769 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 K7EN84 100 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 SLC17A3O00476 420 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 SPINT2O43291 252 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 OR10J1P30954 320 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 ZNF134P52741 427 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 RPL31P62899 125 aaKnown RBP7.01□□□□□ -1.29
TRIM55-204ENST00000353317 SMIM21Q3B7S5 101 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 TDRG1Q3Y452 100 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 RPL39P5Q59GN2 51 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 OR10G8Q8NGN5 311 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 CMTM2Q8TAZ6 248 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 TBX15Q96SF7 602 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 TXNDC17Q9BRA2 123 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 RNF7Q9UBF6 113 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 NBPF19A0A087WUL8 3843 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 YPEL1O60688 119 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 FRMD6-AS1P0C7T7 363 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 SELENOTP62341 195 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 RPP30P78346 268 aaKnown RBP7.01□□□□□ -1.29
TRIM55-204ENST00000353317 RELBQ01201 579 aa7.01□□□□□ -1.29
TRIM55-204ENST00000353317 EFNB3Q15768 340 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms