RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 NPVFQ9HCQ7 196 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 ATRQ13535 2644 aa5.57□□□□□ -1.52
TRIM55-203ENST00000350034 MALRD1Q5VYJ5 2156 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 IGHV3-72A0A0B4J1Y9 119 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 CYB5BO43169 146 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 SLC25A17O43808 307 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 ZFP36P26651 326 aaKnown RBP5.56□□□□□ -1.52
TRIM55-203ENST00000350034 MAS1LP35410 378 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 GPX4P36969 197 aaPredicted RBP5.56□□□□□ -1.52
TRIM55-203ENST00000350034 RPL29P47914 159 aaKnown RBP5.56□□□□□ -1.52
TRIM55-203ENST00000350034 ARF6P62330 175 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 PRR20EP86478 221 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 PRR20CP86479 221 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 PRR20DP86480 221 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 PRR20BP86481 221 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 PRR20AP86496 221 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 WT1-ASQ06250 92 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 PSG5Q15238 335 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 PRSS8Q16651 343 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 HAGHQ16775 308 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 SOHLH1Q5JUK2 328 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 TMEM144Q7Z5S9 345 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 OR10W1Q8NGF6 305 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 RXFP4Q8TDU9 374 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 CACNG8Q8WXS5 425 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 CFHR4Q92496 578 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 RAB24Q969Q5 203 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 RPEQ96AT9 228 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 SPOCK3Q9BQ16 436 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 HINT2Q9BX68 163 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 SIRPDQ9H106 197 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 TPSG1Q9NRR2 321 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 KCNIP2Q9NS61 270 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 SLC39A9Q9NUM3 307 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 DPM3Q9P2X0 92 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 ONECUT1Q9UBC0 465 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 SLC45A2Q9UMX9 530 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 SIGLEC9Q9Y336 463 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 INSIG2Q9Y5U4 225 aa5.56□□□□□ -1.52
TRIM55-203ENST00000350034 KLF2Q9Y5W3 355 aaPredicted RBP5.56□□□□□ -1.52
TRIM55-203ENST00000350034 ANKHD1Q8IWZ3 2542 aaKnown RBP5.55□□□□□ -1.52
TRIM55-203ENST00000350034 IGLC7A0M8Q6 106 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 OOSP1A8MZH6 123 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 ENSAO43768 121 aaKnown RBP5.55□□□□□ -1.52
TRIM55-203ENST00000350034 VENTXO95231 258 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 OPN1MWP04001 364 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 CRYGCP07315 174 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 LINC00869P0C866 280 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 RNF224P0DH78 156 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 OPN1MW2P0DN77 364 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 OPN1MW3P0DN78 364 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 OR13C7P0DN81 318 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 HTR1DP28221 377 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 TAGLN2P37802 199 aaKnown RBP5.55□□□□□ -1.52
TRIM55-203ENST00000350034 CDC34P49427 236 aaPredicted RBP5.55□□□□□ -1.52
TRIM55-203ENST00000350034 FGF8P55075 233 aaPredicted RBP5.55□□□□□ -1.52
TRIM55-203ENST00000350034 LMO4P61968 165 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 ERHP84090 104 aaKnown RBP5.55□□□□□ -1.52
TRIM55-203ENST00000350034 PRB3Q04118 309 aaPredicted RBP5.55□□□□□ -1.52
TRIM55-203ENST00000350034 CD69Q07108 199 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 C10orf55Q5SWW7 151 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 MIC13Q5XKP0 118 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 FAM90A2PQ658T7 463 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 FAM122CQ6P4D5 195 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 TEPPQ6URK8 271 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 MOB3BQ86TA1 216 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 MMD2Q8IY49 270 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 ZNF114Q8NC26 417 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 RNASEH2CQ8TDP1 164 aaKnown RBP5.55□□□□□ -1.52
TRIM55-203ENST00000350034 P2RX4Q99571 388 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 SLC25A22Q9H936 323 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 SIRT7Q9NRC8 400 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 GNG13Q9P2W3 67 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 VAX2Q9UIW0 290 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 POLR3KQ9Y2Y1 108 aaPredicted RBP5.55□□□□□ -1.52
TRIM55-203ENST00000350034 PXMP4Q9Y6I8 212 aa5.55□□□□□ -1.52
TRIM55-203ENST00000350034 DIDO1Q9BTC0 2240 aaKnown RBP5.54□□□□□ -1.52
TRIM55-203ENST00000350034 TET2Q6N021 2002 aaPredicted RBP5.54□□□□□ -1.52
TRIM55-203ENST00000350034 IGKV1OR2-108A0A075B7D4 117 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 IGHV2-70DA0A0C4DH43 119 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 SMCO3A2RU48 225 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 C7orf77A4D0Y5 90 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 TIMM23O14925 209 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 NUPL2O15504 423 aaKnown RBP5.54□□□□□ -1.52
TRIM55-203ENST00000350034 NDUFA3O95167 84 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 IFNA1P01562 189 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 IGHV4-39P01824 125 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 FBP1P09467 338 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 PAX6P26367 422 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 CNTFRP26992 372 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 CEACAM3P40198 252 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 COMPP49747 757 aaPredicted RBP5.54□□□□□ -1.52
TRIM55-203ENST00000350034 B2MP61769 119 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 SSBP2P81877 361 aaPredicted RBP5.54□□□□□ -1.52
TRIM55-203ENST00000350034 KLRD1Q13241 179 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 RAB31Q13636 194 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 GAMTQ14353 236 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 HNF4GQ14541 408 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 RHEBQ15382 184 aa5.54□□□□□ -1.52
TRIM55-203ENST00000350034 AWAT1Q58HT5 328 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms