RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 MT-CO2P00403 227 aa15.37■□□□□ 0.05
SCARF1-202ENST00000348987 OSTCQ9NRP0 149 aa15.37■□□□□ 0.05
SCARF1-202ENST00000348987 SVILO95425 2214 aa15.37■□□□□ 0.05
SCARF1-202ENST00000348987 MAP1BP46821 2468 aaKnown RBP15.37■□□□□ 0.05
SCARF1-202ENST00000348987 LINC00869P0C866 280 aa15.37■□□□□ 0.05
SCARF1-202ENST00000348987 MGST1P10620 155 aaKnown RBP15.37■□□□□ 0.05
SCARF1-202ENST00000348987 TBR1Q16650 682 aa15.37■□□□□ 0.05
SCARF1-202ENST00000348987 IBA57Q5T440 356 aaKnown RBP15.37■□□□□ 0.05
SCARF1-202ENST00000348987 STPG3Q8N7X2 389 aa15.37■□□□□ 0.05
SCARF1-202ENST00000348987 OR8B3Q8NGG8 313 aa15.37■□□□□ 0.05
SCARF1-202ENST00000348987 OR8B2Q96RD0 313 aa15.37■□□□□ 0.05
SCARF1-202ENST00000348987 MRPL27Q9P0M9 148 aaKnown RBP15.37■□□□□ 0.05
SCARF1-202ENST00000348987 PRSS46E5RG02 174 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 PSPNO60542 156 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 WISP2O76076 250 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 TFF1P04155 84 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 UBE2G1P62253 170 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 TIGITQ495A1 244 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 HES3Q5TGS1 186 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 AMMECR1LQ6DCA0 310 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 NINJ1Q92982 152 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 TAAR6Q96RI8 345 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 ABI3Q9P2A4 366 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 SPRR3Q9UBC9 169 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 MGAQ8IWI9 3026 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 SMG1Q96Q15 3661 aaKnown RBP15.36■□□□□ 0.05
SCARF1-202ENST00000348987 IGHV3-43A0A0B4J1X8 118 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 DEFB108AA8MXU0 73 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 HBZP02008 142 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 IGHV3-43DP0DP04 118 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 SRSF6Q13247 344 aaKnown RBP15.36■□□□□ 0.05
SCARF1-202ENST00000348987 SPACA3Q8IXA5 215 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 SLC24A4Q8NFF2 622 aa15.36■□□□□ 0.05
SCARF1-202ENST00000348987 ZNF331Q9NQX6 463 aaPredicted RBP15.36■□□□□ 0.05
SCARF1-202ENST00000348987 SMIM27A0A1W2PRY6 76 aa15.35■□□□□ 0.05
SCARF1-202ENST00000348987 C2orf70A6NJV1 201 aa15.35■□□□□ 0.05
SCARF1-202ENST00000348987 NUDT3O95989 172 aa15.35■□□□□ 0.05
SCARF1-202ENST00000348987 ZNF883P0CG24 379 aa15.35■□□□□ 0.05
SCARF1-202ENST00000348987 PSG5Q15238 335 aa15.35■□□□□ 0.05
SCARF1-202ENST00000348987 MIR17HGQ75NE6 70 aa15.35■□□□□ 0.05
SCARF1-202ENST00000348987 CXorf67Q86X51 503 aaPredicted RBP15.35■□□□□ 0.05
SCARF1-202ENST00000348987 VKORC1L1Q8N0U8 176 aa15.35■□□□□ 0.05
SCARF1-202ENST00000348987 FAM168AQ92567 244 aa15.35■□□□□ 0.05
SCARF1-202ENST00000348987 SPOCK3Q9BQ16 436 aa15.35■□□□□ 0.05
SCARF1-202ENST00000348987 SSBP3Q9BWW4 388 aaPredicted RBP15.35■□□□□ 0.05
SCARF1-202ENST00000348987 AHRRA9YTQ3 701 aa15.35■□□□□ 0.05
SCARF1-202ENST00000348987 SSTR5P35346 364 aa15.35■□□□□ 0.05
SCARF1-202ENST00000348987 AESQ08117 197 aa15.35■□□□□ 0.05
SCARF1-202ENST00000348987 TMEM164Q5U3C3 297 aa15.35■□□□□ 0.05
SCARF1-202ENST00000348987 RNASEKQ6P5S7 137 aaKnown RBP15.35■□□□□ 0.05
SCARF1-202ENST00000348987 CORO2AQ92828 525 aa15.35■□□□□ 0.05
SCARF1-202ENST00000348987 CLCF1Q9UBD9 225 aa15.35■□□□□ 0.05
SCARF1-202ENST00000348987 GRPP07492 148 aa15.34■□□□□ 0.05
SCARF1-202ENST00000348987 AREGP15514 252 aa15.34■□□□□ 0.05
SCARF1-202ENST00000348987 CA7P43166 264 aa15.34■□□□□ 0.05
SCARF1-202ENST00000348987 NHLRC2Q8NBF2 726 aa15.34■□□□□ 0.05
SCARF1-202ENST00000348987 MDS2Q8NDY4 140 aa15.34■□□□□ 0.05
SCARF1-202ENST00000348987 NPVFQ9HCQ7 196 aa15.34■□□□□ 0.05
SCARF1-202ENST00000348987 CLEC5AQ9NY25 188 aa15.34■□□□□ 0.05
SCARF1-202ENST00000348987 LSM4Q9Y4Z0 139 aaKnown RBP15.34■□□□□ 0.05
SCARF1-202ENST00000348987 ISLRO14498 428 aa15.34■□□□□ 0.05
SCARF1-202ENST00000348987 ERVK11-1P61568 191 aa15.34■□□□□ 0.05
SCARF1-202ENST00000348987 RPL8P62917 257 aaKnown RBP15.34■□□□□ 0.05
SCARF1-202ENST00000348987 IL19Q9UHD0 177 aa15.34■□□□□ 0.05
SCARF1-202ENST00000348987 GFRA3O60609 400 aa15.33■□□□□ 0.05
SCARF1-202ENST00000348987 IGLV2-8P01709 118 aa15.33■□□□□ 0.05
SCARF1-202ENST00000348987 GPR6P46095 362 aaPredicted RBP15.33■□□□□ 0.05
SCARF1-202ENST00000348987 PLA2G2CQ5R387 149 aa15.33■□□□□ 0.05
SCARF1-202ENST00000348987 PRAMEF5Q5TYX0 476 aa15.33■□□□□ 0.05
SCARF1-202ENST00000348987 PRAMEF6Q5VXH4 476 aa15.33■□□□□ 0.05
SCARF1-202ENST00000348987 TNFRSF19Q9NS68 423 aa15.33■□□□□ 0.05
SCARF1-202ENST00000348987 RIF1Q5UIP0 2472 aaKnown RBP15.33■□□□□ 0.04
SCARF1-202ENST00000348987 MUC21A0A0G2JKD1 596 aa15.33■□□□□ 0.04
SCARF1-202ENST00000348987 MUC21A0A140T8X8 626 aa15.33■□□□□ 0.04
SCARF1-202ENST00000348987 IZUMO1RA6ND01 250 aa15.33■□□□□ 0.04
SCARF1-202ENST00000348987 C21orf140B9A014 251 aa15.33■□□□□ 0.04
SCARF1-202ENST00000348987 WNT9BO14905 357 aa15.33■□□□□ 0.04
SCARF1-202ENST00000348987 SMPD2O60906 423 aa15.33■□□□□ 0.04
SCARF1-202ENST00000348987 LYZL6O75951 148 aa15.33■□□□□ 0.04
SCARF1-202ENST00000348987 TMPRSS3P57727 454 aa15.33■□□□□ 0.04
SCARF1-202ENST00000348987 PRR31Q5SQ13 230 aa15.33■□□□□ 0.04
SCARF1-202ENST00000348987 MUC21Q5SSG8 566 aa15.33■□□□□ 0.04
SCARF1-202ENST00000348987 PRR27Q6MZM9 219 aa15.33■□□□□ 0.04
SCARF1-202ENST00000348987 ZNF826PQ6ZT77 177 aa15.33■□□□□ 0.04
SCARF1-202ENST00000348987 OR4A16Q8NH70 328 aa15.33■□□□□ 0.04
SCARF1-202ENST00000348987 RFESDQ8TAC1 157 aa15.33■□□□□ 0.04
SCARF1-202ENST00000348987 GCM1Q9NP62 436 aa15.33■□□□□ 0.04
SCARF1-202ENST00000348987 PSG11Q9UQ72 335 aa15.33■□□□□ 0.04
SCARF1-202ENST00000348987 OTOGLQ3ZCN5 2332 aa15.33■□□□□ 0.04
SCARF1-202ENST00000348987 SPTBN2O15020 2390 aa15.32■□□□□ 0.04
SCARF1-202ENST00000348987 NPY1RP25929 384 aa15.32■□□□□ 0.04
SCARF1-202ENST00000348987 VDAC2P45880 294 aaPredicted RBP15.32■□□□□ 0.04
SCARF1-202ENST00000348987 BVES-AS1Q5T3Y7 98 aa15.32■□□□□ 0.04
SCARF1-202ENST00000348987 RTL8AQ9BWD3 113 aa15.32■□□□□ 0.04
SCARF1-202ENST00000348987 TMEM30CPA0ZSE6 113 aa15.32■□□□□ 0.04
SCARF1-202ENST00000348987 FCGR3BO75015 233 aa15.32■□□□□ 0.04
SCARF1-202ENST00000348987 ZNF146Q15072 292 aa15.32■□□□□ 0.04
SCARF1-202ENST00000348987 GDF5OSQ5U4N7 250 aa15.32■□□□□ 0.04
SCARF1-202ENST00000348987 TEPPQ6URK8 271 aa15.32■□□□□ 0.04
SCARF1-202ENST00000348987 TPRX1Q8N7U7 411 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms