RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 ZNF808Q8N4W9 903 aaPredicted RBP8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 KIR3DL3Q8N743 410 aa8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 STPG3Q8N7X2 389 aa8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 OR52E5Q8NH55 327 aa8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 SARAFQ96BY9 339 aa8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 MBD6Q96DN6 1003 aa8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 TMEM191AQ9H0A3 160 aa8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 TP73-AS1Q9UF72 201 aa8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 ZNF835Q9Y2P0 537 aa8.51□□□□□ -1.05
CHRNA1-202ENST00000348749 LOC102724200A0A096LPH7 203 aaPredicted RBP8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 SYS1-DBNDD2H3BUS1 97 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 OR7C2O60412 319 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 RHBDL1O75783 438 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 OR9G9P0C7N8 305 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 RBPJQ06330 500 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 PEAR1Q5VY43 1037 aaPredicted RBP8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 TRAT1Q6PIZ9 186 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 GTF2H5Q6ZYL4 71 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 OR2V2Q96R30 315 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 HSD17B10Q99714 261 aaKnown RBP8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 ABI3Q9P2A4 366 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 XIRP2A4UGR9 3374 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 CNTRLQ7Z7A1 2325 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 hDV102S1A0JD36 115 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 GAGE10A6NGK3 116 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 BMI1P35226 326 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 SEC11AP67812 179 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 PRR20EP86478 221 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 PRR20CP86479 221 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 PRR20DP86480 221 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 PRR20BP86481 221 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 PRR20AP86496 221 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 PLGLB1Q02325 96 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 TBC1D28Q2M2D7 210 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 GDF5OSQ5U4N7 250 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 TEPPQ6URK8 271 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 C6orf15Q6UXA7 325 aaPredicted RBP8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 FAM231DQ6ZW35 169 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 OR1B1Q8NGR6 318 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 PRR7Q8TB68 274 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 SSMEM1Q8WWF3 244 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 URB1-AS1Q96HZ7 61 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 PMCHL2Q9BQD1 86 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 SERTAD4Q9NUC0 356 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 CLEC5AQ9NY25 188 aa8.5□□□□□ -1.05
CHRNA1-202ENST00000348749 ZNF407Q9C0G0 2248 aa8.49□□□□□ -1.05
CHRNA1-202ENST00000348749 C3orf80F5H4A9 247 aa8.49□□□□□ -1.05
CHRNA1-202ENST00000348749 GFRA3O60609 400 aa8.49□□□□□ -1.05
CHRNA1-202ENST00000348749 CER1O95813 267 aa8.49□□□□□ -1.05
CHRNA1-202ENST00000348749 IGFBP4P22692 258 aa8.49□□□□□ -1.05
CHRNA1-202ENST00000348749 RPL8P62917 257 aaKnown RBP8.49□□□□□ -1.05
CHRNA1-202ENST00000348749 RAB31Q13636 194 aa8.49□□□□□ -1.05
CHRNA1-202ENST00000348749 RTL8BQ17RB0 113 aa8.49□□□□□ -1.05
CHRNA1-202ENST00000348749 C9orf135Q5VTT2 229 aa8.49□□□□□ -1.05
CHRNA1-202ENST00000348749 NEGR1Q7Z3B1 354 aa8.49□□□□□ -1.05
CHRNA1-202ENST00000348749 ATP5L2Q7Z4Y8 100 aa8.49□□□□□ -1.05
CHRNA1-202ENST00000348749 OR2T6Q8NHC8 308 aa8.49□□□□□ -1.05
CHRNA1-202ENST00000348749 CHCHD1Q96BP2 118 aaKnown RBP8.49□□□□□ -1.05
CHRNA1-202ENST00000348749 ESPL1Q14674 2120 aa8.49□□□□□ -1.05
CHRNA1-202ENST00000348749 FREM1Q5H8C1 2179 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 C7orf71A4D174 169 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 LINC00473A8K010 186 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 IQCF6A8MYZ5 107 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 HAND1O96004 215 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 HBZP02008 142 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 SP9P0CG40 484 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 SCGB1A1P11684 91 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 GPR183P32249 361 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 CEACAM3P40198 252 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 FOXG1P55316 489 aaPredicted RBP8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 PSG5Q15238 335 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 OR1C1Q15619 314 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 ZNF766Q5HY98 468 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 MIR17HGQ75NE6 70 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 FAM214BQ7L5A3 538 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 GRAMD2BQ96HH9 432 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 TRIB1Q96RU8 372 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 HEYLQ9NQ87 328 aaPredicted RBP8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 CLCF1Q9UBD9 225 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 VCANP13611 3396 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 TRGV8A0A0C4DH27 118 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 A0A1W2PRE2 83 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 GGTLC3B5MD39 225 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 C12orf77C9JDV5 145 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 FNDC10F2Z333 226 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 SMPD2O60906 423 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 MT-CO3P00414 261 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 MGST1P10620 155 aaKnown RBP8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 DUTP33316 252 aaKnown RBP8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 GPR6P46095 362 aaPredicted RBP8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 LGALS7P47929 136 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 MFAP2P55001 183 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 SRYQ05066 204 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 ABHD17BQ5VST6 288 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 WDR86Q86TI4 376 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 CT55Q8WUE5 264 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 SIT1Q9Y3P8 196 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 OR51B2Q9Y5P1 312 aa8.48□□□□□ -1.05
CHRNA1-202ENST00000348749 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.47□□□□□ -1.05
CHRNA1-202ENST00000348749 A0A1B0GXF2 115 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms