RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 CD7P09564 240 aa19.39■□□□□ 0.69
NPAS3-201ENST00000346562 SAA2P0DJI9 122 aaPredicted RBP19.39■□□□□ 0.69
NPAS3-201ENST00000346562 FHITP49789 147 aa19.39■□□□□ 0.69
NPAS3-201ENST00000346562 TMEM133Q9H2Q1 129 aa19.39■□□□□ 0.69
NPAS3-201ENST00000346562 SCO2A0A1W2PP80 73 aa19.39■□□□□ 0.69
NPAS3-201ENST00000346562 PROB1E7EW31 1015 aa19.39■□□□□ 0.69
NPAS3-201ENST00000346562 ST20Q9HBF5 79 aa19.39■□□□□ 0.69
NPAS3-201ENST00000346562 TNS1Q9HBL0 1735 aaKnown RBP19.38■□□□□ 0.69
NPAS3-201ENST00000346562 CELA3BP08861 270 aa19.38■□□□□ 0.69
NPAS3-201ENST00000346562 UPK2O00526 184 aa19.38■□□□□ 0.69
NPAS3-201ENST00000346562 EGR1P18146 543 aa19.38■□□□□ 0.69
NPAS3-201ENST00000346562 DMRTA2Q96SC8 542 aa19.38■□□□□ 0.69
NPAS3-201ENST00000346562 DPRXA6NFQ7 191 aa19.38■□□□□ 0.69
NPAS3-201ENST00000346562 LHX2P50458 406 aa19.38■□□□□ 0.69
NPAS3-201ENST00000346562 MRPL14Q6P1L8 145 aaKnown RBP19.38■□□□□ 0.69
NPAS3-201ENST00000346562 TRAV14DV4A0A0A6YYC5 116 aa19.38■□□□□ 0.69
NPAS3-201ENST00000346562 DDTP30046 118 aa19.38■□□□□ 0.69
NPAS3-201ENST00000346562 PEF1Q9UBV8 284 aaKnown RBP19.38■□□□□ 0.69
NPAS3-201ENST00000346562 TRGV11A0A075B6L2 103 aa19.38■□□□□ 0.69
NPAS3-201ENST00000346562 TRAV9-1A0A075B6T8 112 aa19.38■□□□□ 0.69
NPAS3-201ENST00000346562 ZNF688P0C7X2 276 aa19.38■□□□□ 0.69
NPAS3-201ENST00000346562 MTURNQ8N3F0 131 aa19.38■□□□□ 0.69
NPAS3-201ENST00000346562 TMEM105Q8N8V8 129 aa19.38■□□□□ 0.69
NPAS3-201ENST00000346562 NSUN5P1Q3KNT7 163 aa19.37■□□□□ 0.69
NPAS3-201ENST00000346562 MIR17HGQ75NE6 70 aa19.37■□□□□ 0.69
NPAS3-201ENST00000346562 ORMDL3Q8N138 153 aa19.37■□□□□ 0.69
NPAS3-201ENST00000346562 YPEL1O60688 119 aa19.37■□□□□ 0.69
NPAS3-201ENST00000346562 YPEL2Q96QA6 119 aa19.37■□□□□ 0.69
NPAS3-201ENST00000346562 SDHCQ99643 169 aaPredicted RBP19.37■□□□□ 0.69
NPAS3-201ENST00000346562 IGHV3OR16-8A0A075B7F1 116 aa19.37■□□□□ 0.69
NPAS3-201ENST00000346562 CMC4P56277 68 aaPredicted RBP19.37■□□□□ 0.69
NPAS3-201ENST00000346562 E9PLN8 166 aa19.36■□□□□ 0.69
NPAS3-201ENST00000346562 SIGLEC5O15389 551 aa19.36■□□□□ 0.69
NPAS3-201ENST00000346562 UMODP07911 640 aa19.36■□□□□ 0.69
NPAS3-201ENST00000346562 IFI27P40305 119 aaPredicted RBP19.36■□□□□ 0.69
NPAS3-201ENST00000346562 VKORC1Q9BQB6 163 aa19.36■□□□□ 0.69
NPAS3-201ENST00000346562 SCN4AP35499 1836 aa19.36■□□□□ 0.69
NPAS3-201ENST00000346562 IZUMO1RA6ND01 250 aa19.36■□□□□ 0.69
NPAS3-201ENST00000346562 DPH3P1Q9H4G8 78 aa19.36■□□□□ 0.69
NPAS3-201ENST00000346562 CACNA1CQ13936 2221 aa19.36■□□□□ 0.69
NPAS3-201ENST00000346562 IGKV1D-43A0A0B4J1Z2 117 aa19.36■□□□□ 0.69
NPAS3-201ENST00000346562 TRGV4A0A0C4DH28 118 aa19.36■□□□□ 0.69
NPAS3-201ENST00000346562 KIR3DL3Q8N743 410 aa19.36■□□□□ 0.69
NPAS3-201ENST00000346562 ATAD5Q96QE3 1844 aa19.36■□□□□ 0.69
NPAS3-201ENST00000346562 MUC21A0A0G2JKD1 596 aa19.35■□□□□ 0.69
NPAS3-201ENST00000346562 MUC21A0A140T8X8 626 aa19.35■□□□□ 0.69
NPAS3-201ENST00000346562 MUC21Q5SSG8 566 aa19.35■□□□□ 0.69
NPAS3-201ENST00000346562 TMEM50AO95807 157 aa19.35■□□□□ 0.69
NPAS3-201ENST00000346562 UBE2DNLQ8IWF7 75 aa19.35■□□□□ 0.69
NPAS3-201ENST00000346562 WFIKKN1Q96NZ8 548 aa19.35■□□□□ 0.69
NPAS3-201ENST00000346562 FABP5P3A8MUU1 101 aa19.35■□□□□ 0.69
NPAS3-201ENST00000346562 WNT2P09544 360 aa19.35■□□□□ 0.69
NPAS3-201ENST00000346562 ZNFX1Q9P2E3 1918 aaKnown RBP19.35■□□□□ 0.69
NPAS3-201ENST00000346562 TRAV21A0A0B4J279 112 aa19.35■□□□□ 0.69
NPAS3-201ENST00000346562 NDUFA3O95167 84 aa19.35■□□□□ 0.69
NPAS3-201ENST00000346562 CCL3L1P16619 93 aa19.35■□□□□ 0.69
NPAS3-201ENST00000346562 ZNF600Q6ZNG1 722 aa19.35■□□□□ 0.69
NPAS3-201ENST00000346562 MYO7AQ13402 2215 aa19.34■□□□□ 0.69
NPAS3-201ENST00000346562 SLC17A3O00476 420 aa19.34■□□□□ 0.69
NPAS3-201ENST00000346562 NHLRC3Q5JS37 347 aa19.34■□□□□ 0.69
NPAS3-201ENST00000346562 ZNF646O15015 1829 aaPredicted RBP19.34■□□□□ 0.69
NPAS3-201ENST00000346562 C15orf61A6NNL5 157 aa19.33■□□□□ 0.69
NPAS3-201ENST00000346562 VCX2Q9H322 139 aa19.33■□□□□ 0.69
NPAS3-201ENST00000346562 PLPPR1Q8TBJ4 325 aa19.33■□□□□ 0.69
NPAS3-201ENST00000346562 NXT2Q9NPJ8 142 aaKnown RBP19.33■□□□□ 0.69
NPAS3-201ENST00000346562 RHOGP84095 191 aa19.33■□□□□ 0.68
NPAS3-201ENST00000346562 COL5A3P25940 1745 aaPredicted RBP19.33■□□□□ 0.68
NPAS3-201ENST00000346562 RNF125Q96EQ8 232 aa19.33■□□□□ 0.68
NPAS3-201ENST00000346562 STRCP1A6NGW2 1772 aa19.33■□□□□ 0.68
NPAS3-201ENST00000346562 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP19.33■□□□□ 0.68
NPAS3-201ENST00000346562 GLMPQ8WWB7 406 aa19.33■□□□□ 0.68
NPAS3-201ENST00000346562 C21orf62-AS1Q17RA5 79 aa19.32■□□□□ 0.68
NPAS3-201ENST00000346562 TMEM144Q7Z5S9 345 aa19.32■□□□□ 0.68
NPAS3-201ENST00000346562 DOCK5Q9H7D0 1870 aa19.32■□□□□ 0.68
NPAS3-201ENST00000346562 SPACA3Q8IXA5 215 aa19.32■□□□□ 0.68
NPAS3-201ENST00000346562 RTBDNQ9BSG5 229 aaPredicted RBP19.31■□□□□ 0.68
NPAS3-201ENST00000346562 ATP5G3P48201 142 aa19.31■□□□□ 0.68
NPAS3-201ENST00000346562 TRBV6-7A0A0A0MS04 114 aa19.31■□□□□ 0.68
NPAS3-201ENST00000346562 LINC00271P0C7V0 271 aa19.31■□□□□ 0.68
NPAS3-201ENST00000346562 C19orf67A6NJJ6 358 aa19.31■□□□□ 0.68
NPAS3-201ENST00000346562 TBL2Q9Y4P3 447 aaKnown RBP19.31■□□□□ 0.68
NPAS3-201ENST00000346562 COL11A2P13942 1736 aaPredicted RBP19.31■□□□□ 0.68
NPAS3-201ENST00000346562 MPTX1A8MV57 137 aa19.31■□□□□ 0.68
NPAS3-201ENST00000346562 TGFBR3LH3BV60 316 aa19.31■□□□□ 0.68
NPAS3-201ENST00000346562 COL4A5P29400 1685 aa19.31■□□□□ 0.68
NPAS3-201ENST00000346562 LOC102723996A0A087X1L8 192 aa19.3■□□□□ 0.68
NPAS3-201ENST00000346562 PHLDA1Q8WV24 401 aaPredicted RBP19.3■□□□□ 0.68
NPAS3-201ENST00000346562 TNFRSF14Q92956 283 aa19.3■□□□□ 0.68
NPAS3-201ENST00000346562 OR9G9P0C7N8 305 aa19.29■□□□□ 0.68
NPAS3-201ENST00000346562 IGLV3-12A0A075B6K2 115 aa19.29■□□□□ 0.68
NPAS3-201ENST00000346562 MORN2Q502X0 79 aa19.29■□□□□ 0.68
NPAS3-201ENST00000346562 ZNF324BQ6AW86 544 aaPredicted RBP19.29■□□□□ 0.68
NPAS3-201ENST00000346562 LINC00114Q6XXX2 140 aa19.29■□□□□ 0.68
NPAS3-201ENST00000346562 ZNF497Q6ZNH5 498 aa19.29■□□□□ 0.68
NPAS3-201ENST00000346562 ADAMTS7Q9UKP4 1686 aa19.29■□□□□ 0.68
NPAS3-201ENST00000346562 OVOL1O14753 267 aa19.29■□□□□ 0.68
NPAS3-201ENST00000346562 IGHV1-18A0A0C4DH31 117 aa19.29■□□□□ 0.68
NPAS3-201ENST00000346562 ZNF525Q8N782 197 aa19.29■□□□□ 0.68
NPAS3-201ENST00000346562 CFHR1Q03591 330 aa19.29■□□□□ 0.68
NPAS3-201ENST00000346562 DMRT1Q9Y5R6 373 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms