RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 FAM213BQ8TBF2 198 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 ZNF596Q8TC21 504 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 NEU4Q8WWR8 484 aaPredicted RBP7.49□□□□□ -1.21
ATG4A-202ENST00000345734 FAM210BQ96KR6 192 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 RSG1Q9BU20 258 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 STRAPQ9Y3F4 350 aaKnown RBP7.49□□□□□ -1.21
ATG4A-202ENST00000345734 EPG5Q9HCE0 2579 aa7.49□□□□□ -1.21
ATG4A-202ENST00000345734 UBE2L5PA0A1B0GUS4 154 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 RTL8BQ17RB0 113 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 WDR25Q64LD2 544 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-202ENST00000345734 ABHD12Q8N2K0 398 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 LINC00311Q8N616 119 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 OR8B3Q8NGG8 313 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 RAB39BQ96DA2 213 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 CIB3Q96Q77 187 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-202ENST00000345734 OR8B2Q96RD0 313 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 TMEM133Q9H2Q1 129 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 MAP1AP78559 2803 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-202ENST00000345734 ZNF462Q96JM2 2506 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 PPIAL4CA0A0B4J2A2 164 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 C15orf61A6NNL5 157 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 C15orf62A8K5M9 175 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 H0YJW9 148 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 PPBPP02775 128 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 PPIAL4GP0DN37 164 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 IGFBP2P18065 325 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 TLE4Q04727 773 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 C8orf31Q8N9H6 132 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 OR52E5Q8NH55 327 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 OR9G1Q8NH87 305 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 SCGB1C1Q8TD33 95 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 RAB1CQ92928 201 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 ST6GALNAC6Q969X2 333 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 GNPNAT1Q96EK6 184 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-202ENST00000345734 NEIL1Q96FI4 390 aaPredicted RBP7.48□□□□□ -1.21
ATG4A-202ENST00000345734 TREM1Q9NP99 234 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 UQCC1Q9NVA1 299 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 TCF19Q9Y242 345 aa7.48□□□□□ -1.21
ATG4A-202ENST00000345734 TSPAN15O95858 294 aa7.47□□□□□ -1.21
ATG4A-202ENST00000345734 HRASP01112 189 aa7.47□□□□□ -1.21
ATG4A-202ENST00000345734 PRB1P04280 392 aa7.47□□□□□ -1.21
ATG4A-202ENST00000345734 NPSP0C0P6 89 aa7.47□□□□□ -1.21
ATG4A-202ENST00000345734 VDAC2P45880 294 aaPredicted RBP7.47□□□□□ -1.21
ATG4A-202ENST00000345734 POU2AF1Q16633 256 aa7.47□□□□□ -1.21
ATG4A-202ENST00000345734 LRRC75BQ2VPJ9 315 aa7.47□□□□□ -1.21
ATG4A-202ENST00000345734 ZNF429Q86V71 674 aa7.47□□□□□ -1.21
ATG4A-202ENST00000345734 NUDT10Q8NFP7 164 aa7.47□□□□□ -1.21
ATG4A-202ENST00000345734 TIMD4Q96H15 378 aa7.47□□□□□ -1.21
ATG4A-202ENST00000345734 NABP2Q9BQ15 211 aa7.47□□□□□ -1.21
ATG4A-202ENST00000345734 CHODLQ9H9P2 273 aa7.47□□□□□ -1.21
ATG4A-202ENST00000345734 IGHV2-26A0A0B4J1V2 119 aa7.46□□□□□ -1.21
ATG4A-202ENST00000345734 C9JQL5 133 aa7.46□□□□□ -1.21
ATG4A-202ENST00000345734 APOA2P02652 100 aa7.46□□□□□ -1.21
ATG4A-202ENST00000345734 ARG1P05089 322 aa7.46□□□□□ -1.21
ATG4A-202ENST00000345734 IL6RP08887 468 aaPredicted RBP7.46□□□□□ -1.21
ATG4A-202ENST00000345734 PDLIM3Q53GG5 364 aaPredicted RBP7.46□□□□□ -1.21
ATG4A-202ENST00000345734 AKR1C8PQ5T2L2 129 aa7.46□□□□□ -1.21
ATG4A-202ENST00000345734 ETFRF1Q6IPR1 90 aa7.46□□□□□ -1.21
ATG4A-202ENST00000345734 FAM168AQ92567 244 aa7.46□□□□□ -1.21
ATG4A-202ENST00000345734 TMEM186Q96B77 213 aa7.46□□□□□ -1.21
ATG4A-202ENST00000345734 WDR61Q9GZS3 305 aaKnown RBP7.46□□□□□ -1.21
ATG4A-202ENST00000345734 VSIRQ9H7M9 311 aa7.46□□□□□ -1.21
ATG4A-202ENST00000345734 HEYLQ9NQ87 328 aaPredicted RBP7.46□□□□□ -1.21
ATG4A-202ENST00000345734 TMEM14BQ9NUH8 114 aa7.46□□□□□ -1.21
ATG4A-202ENST00000345734 FOXA2Q9Y261 457 aaPredicted RBP7.46□□□□□ -1.21
ATG4A-202ENST00000345734 CSMD1Q96PZ7 3565 aa7.46□□□□□ -1.21
ATG4A-202ENST00000345734 A6NNC1 897 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 UMAD1C9J7I0 102 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 RNASEK-C17orf49H0YIS7 233 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 UPK2O00526 184 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 RRHO14718 337 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 SAA1P0DJI8 122 aaPredicted RBP7.46□□□□□ -1.22
ATG4A-202ENST00000345734 COX7A1P24310 79 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 SNCAP37840 140 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 ZNF137PP52743 207 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 CCL20P78556 96 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 FAM71F2Q6NXP2 309 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 OR10P1Q8NGE3 313 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 C8orf46Q8TAG6 207 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 TMEM170AQ8WVE7 144 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 TAF15Q92804 592 aaKnown RBP eCLIP7.46□□□□□ -1.22
ATG4A-202ENST00000345734 HARBI1Q96MB7 349 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 BBC3Q96PG8 261 aaPredicted RBP7.46□□□□□ -1.22
ATG4A-202ENST00000345734 PCGF1Q9BSM1 259 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 ONECUT1Q9UBC0 465 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 OR51B2Q9Y5P1 312 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 NAV3Q8IVL0 2385 aa7.46□□□□□ -1.22
ATG4A-202ENST00000345734 SPG11Q96JI7 2443 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 CELSR2Q9HCU4 2923 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 IFITM10A6NMD0 228 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 K7EP13 123 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 PLA2G1BP04054 148 aaKnown RBP7.45□□□□□ -1.22
ATG4A-202ENST00000345734 CD5P06127 495 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 HSPE1P61604 102 aaKnown RBP7.45□□□□□ -1.22
ATG4A-202ENST00000345734 GNB2P62879 340 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 SPSB3Q6PJ21 355 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 LY6G5BQ8NDX9 201 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 OR10D4PQ8NGN7 298 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 RITA1Q96K30 269 aa7.45□□□□□ -1.22
ATG4A-202ENST00000345734 TMEM147Q9BVK8 224 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms