RNA–Protein interactions for RNA: ENST00000343348.10

SEMA6A-202, Transcript of semaphorin 6A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA6A, Length 6,878 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-202ENST00000343348 LOC390937A0A1W2PQ73 354 aa10.27□□□□□ -0.77
SEMA6A-202ENST00000343348 UCP3P55916 312 aa10.27□□□□□ -0.77
SEMA6A-202ENST00000343348 FHL5Q5TD97 284 aa10.27□□□□□ -0.77
SEMA6A-202ENST00000343348 FER1L6-AS1Q8NA97 138 aa10.27□□□□□ -0.77
SEMA6A-202ENST00000343348 LINC01587Q99440 93 aa10.27□□□□□ -0.77
SEMA6A-202ENST00000343348 TRAV2A0A0B4J234 112 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 ATP5LO75964 103 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 VENTXO95231 258 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 C1QTNF9P0C862 333 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 PAX2Q02962 417 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 CELA3AP09093 270 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 PDLIM4P50479 330 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 ACP7Q6ZNF0 438 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 ALPK2Q86TB3 2170 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 IGHV3-11P01762 117 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 RFPL3SP0C7P2 107 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 LAMTOR2Q9Y2Q5 125 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 COQ2Q96H96 371 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 IZUMO1RA6ND01 250 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 TSPAN7P41732 249 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 RPL23P62829 140 aaKnown RBP10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 C1QL4Q86Z23 238 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 FGF11Q92914 225 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 FMC1Q96HJ9 113 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 USP54Q70EL1 1684 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 CD24P25063 80 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 PAPPA-AS1Q5QFB9 102 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 SDF2L1Q9HCN8 221 aa10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 CARHSP1Q9Y2V2 147 aaKnown RBP10.26□□□□□ -0.77
SEMA6A-202ENST00000343348 C12orf77C9JDV5 145 aa10.25□□□□□ -0.77
SEMA6A-202ENST00000343348 SRD5A1P18405 259 aa10.25□□□□□ -0.77
SEMA6A-202ENST00000343348 CA7P43166 264 aa10.25□□□□□ -0.77
SEMA6A-202ENST00000343348 KIF26BQ2KJY2 2108 aa10.25□□□□□ -0.77
SEMA6A-202ENST00000343348 NAA38Q9BRA0 125 aaKnown RBP10.25□□□□□ -0.77
SEMA6A-202ENST00000343348 OR10J3Q5JRS4 329 aa10.25□□□□□ -0.77
SEMA6A-202ENST00000343348 ANAPC13Q9BS18 74 aa10.25□□□□□ -0.77
SEMA6A-202ENST00000343348 FBLN7Q53RD9 439 aa10.25□□□□□ -0.77
SEMA6A-202ENST00000343348 KIR3DL3Q8N743 410 aa10.25□□□□□ -0.77
SEMA6A-202ENST00000343348 NDUFA2O43678 99 aa10.25□□□□□ -0.77
SEMA6A-202ENST00000343348 STARD6P59095 220 aa10.25□□□□□ -0.77
SEMA6A-202ENST00000343348 ORMDL3Q8N138 153 aa10.25□□□□□ -0.77
SEMA6A-202ENST00000343348 OR13A1Q8NGR1 328 aa10.25□□□□□ -0.77
SEMA6A-202ENST00000343348 DEPPQ9NTK1 212 aa10.25□□□□□ -0.77
SEMA6A-202ENST00000343348 IGHMP01871 453 aa10.25□□□□□ -0.77
SEMA6A-202ENST00000343348 LSM4Q9Y4Z0 139 aaKnown RBP10.25□□□□□ -0.77
SEMA6A-202ENST00000343348 ADAMTSL3P82987 1691 aa10.25□□□□□ -0.77
SEMA6A-202ENST00000343348 FAM216BQ8N7L0 139 aa10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 MRPL20Q9BYC9 149 aaKnown RBP10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 FAM27E3Q08E93 113 aa10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 SIGLEC12Q96PQ1 595 aa10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 RBMY1BA6NDE4 496 aaKnown RBP10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 RBMY1EA6NEQ0 496 aaKnown RBP10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 H3BRM9 83 aa10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 RBMY1DP0C7P1 496 aaKnown RBP10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 RBMY1A1P0DJD3 496 aaKnown RBP10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 RBMY1CP0DJD4 496 aa10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 MALP21145 153 aa10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 SRSF4Q08170 494 aaKnown RBP10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 ELOVL5Q9NYP7 299 aa10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 RNF222A6NCQ9 220 aa10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 CD7P09564 240 aa10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 LDLRAD2Q5SZI1 272 aa10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 CITED2Q99967 270 aaPredicted RBP10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 SFXN3Q9BWM7 321 aa10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 COLQQ9Y215 455 aaPredicted RBP10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 A8MXK9 166 aa10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 CELA3BP08861 270 aa10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 PCOLCEQ15113 449 aa10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 LRTM2Q8N967 370 aa10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 ZNF257Q9Y2Q1 563 aa10.24□□□□□ -0.77
SEMA6A-202ENST00000343348 PRR19A6NJB7 356 aa10.23□□□□□ -0.77
SEMA6A-202ENST00000343348 ZNF585BQ52M93 769 aa10.23□□□□□ -0.77
SEMA6A-202ENST00000343348 A0A087WV48 116 aa10.23□□□□□ -0.77
SEMA6A-202ENST00000343348 RAMP3O60896 148 aa10.23□□□□□ -0.77
SEMA6A-202ENST00000343348 PPP1R27Q86WC6 154 aa10.23□□□□□ -0.77
SEMA6A-202ENST00000343348 FAM181AQ8N9Y4 354 aa10.23□□□□□ -0.77
SEMA6A-202ENST00000343348 TRGV2A0A075B6R0 118 aa10.23□□□□□ -0.77
SEMA6A-202ENST00000343348 PRR32B1ATL7 298 aa10.23□□□□□ -0.77
SEMA6A-202ENST00000343348 C5orf67F2Z3F1 127 aa10.23□□□□□ -0.77
SEMA6A-202ENST00000343348 DIDO1Q9BTC0 2240 aaKnown RBP10.23□□□□□ -0.77
SEMA6A-202ENST00000343348 H7C1H1 209 aa10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 GZMBP10144 247 aa10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 TEX29Q8N6K0 151 aa10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 ZNF837Q96EG3 531 aaPredicted RBP10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 ZNF236Q9UL36 1845 aa10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 TRAV8-4A0A0B4J246 113 aa10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 A0A0G2JMM0 328 aa10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 A0A1W2PPB8 328 aa10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 A0A1W2PRS3 328 aa10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 KIR3DP1A8MWS1 328 aa10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 HOXA3O43365 443 aaPredicted RBP10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 PYYP10082 97 aa10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 CFAP161Q6P656 301 aa10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 FDCSPQ8NFU4 85 aa10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 EIF4EBP2Q13542 120 aaPredicted RBP10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 DMRTC2Q8IXT2 367 aaPredicted RBP10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 ARPC1AQ92747 370 aa10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 C5orf30Q96GV9 206 aa10.22□□□□□ -0.77
SEMA6A-202ENST00000343348 RAB9AP51151 201 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms