RNA–Protein interactions for RNA: ENST00000343257.6

CLCN1-201, Transcript of chloride voltage-gated channel 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN1, Length 3,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-201ENST00000343257 TRAV5A0A0B4J249 113 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 MPDU1O75352 247 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 PROP1O75360 226 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 MORN2Q502X0 79 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 ZBTB34Q8NCN2 500 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 OR2D3Q8NGH3 330 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 TNFRSF19Q9NS68 423 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 ARFGEF3Q5TH69 2177 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 OOEPA6NGQ2 149 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 Q0VFX4 171 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 OR1C1Q15619 314 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 FAM214BQ7L5A3 538 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 TCF19Q9Y242 345 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 POLDIP2Q9Y2S7 368 aa12.26□□□□□ -0.45
CLCN1-201ENST00000343257 TET2Q6N021 2002 aaPredicted RBP12.26□□□□□ -0.45
CLCN1-201ENST00000343257 A0A087X0K7 114 aa12.25□□□□□ -0.45
CLCN1-201ENST00000343257 LOC102723996A0A087X1L8 192 aa12.25□□□□□ -0.45
CLCN1-201ENST00000343257 SAP30O75446 220 aa12.25□□□□□ -0.45
CLCN1-201ENST00000343257 TMEM249Q2WGJ8 235 aa12.25□□□□□ -0.45
CLCN1-201ENST00000343257 UTF1Q5T230 341 aa12.25□□□□□ -0.45
CLCN1-201ENST00000343257 LHFPL4Q7Z7J7 247 aa12.25□□□□□ -0.45
CLCN1-201ENST00000343257 C11orf52Q96A22 123 aa12.25□□□□□ -0.45
CLCN1-201ENST00000343257 ZPBPQ9BS86 351 aa12.25□□□□□ -0.45
CLCN1-201ENST00000343257 HES4Q9HCC6 221 aa12.25□□□□□ -0.45
CLCN1-201ENST00000343257 RPH3ALQ9UNE2 315 aa12.25□□□□□ -0.45
CLCN1-201ENST00000343257 LINC00869P0C866 280 aa12.25□□□□□ -0.45
CLCN1-201ENST00000343257 VDAC2P45880 294 aaPredicted RBP12.25□□□□□ -0.45
CLCN1-201ENST00000343257 ERVK-16P61578 105 aa12.25□□□□□ -0.45
CLCN1-201ENST00000343257 NABP2Q9BQ15 211 aa12.25□□□□□ -0.45
CLCN1-201ENST00000343257 ICE1Q9Y2F5 2266 aa12.25□□□□□ -0.45
CLCN1-201ENST00000343257 ARR3P36575 388 aa12.24□□□□□ -0.45
CLCN1-201ENST00000343257 ZNF138P52744 262 aa12.24□□□□□ -0.45
CLCN1-201ENST00000343257 LYSMD4Q5XG99 296 aa12.24□□□□□ -0.45
CLCN1-201ENST00000343257 OR5B3Q8NH48 314 aa12.24□□□□□ -0.45
CLCN1-201ENST00000343257 GSX1Q9H4S2 264 aaPredicted RBP12.24□□□□□ -0.45
CLCN1-201ENST00000343257 OSTCQ9NRP0 149 aa12.24□□□□□ -0.45
CLCN1-201ENST00000343257 TMEM140Q9NV12 185 aa12.24□□□□□ -0.45
CLCN1-201ENST00000343257 LOXL2Q9Y4K0 774 aa12.24□□□□□ -0.45
CLCN1-201ENST00000343257 ADAMTS20P59510 1910 aa12.24□□□□□ -0.45
CLCN1-201ENST00000343257 H0YJW9 148 aa12.24□□□□□ -0.45
CLCN1-201ENST00000343257 IGLV2-8P01709 118 aa12.24□□□□□ -0.45
CLCN1-201ENST00000343257 ERVK11-1P61568 191 aa12.24□□□□□ -0.45
CLCN1-201ENST00000343257 FOXE3Q13461 319 aa12.24□□□□□ -0.45
CLCN1-201ENST00000343257 IZUMO1RA6ND01 250 aa12.24□□□□□ -0.45
CLCN1-201ENST00000343257 C2orf70A6NJV1 201 aa12.24□□□□□ -0.45
CLCN1-201ENST00000343257 PRB4P10163 310 aaPredicted RBP12.24□□□□□ -0.45
CLCN1-201ENST00000343257 DUTP33316 252 aaKnown RBP12.24□□□□□ -0.45
CLCN1-201ENST00000343257 ZNF137PP52743 207 aa12.24□□□□□ -0.45
CLCN1-201ENST00000343257 ARG2P78540 354 aa12.24□□□□□ -0.45
CLCN1-201ENST00000343257 MEGF9Q9H1U4 602 aa12.24□□□□□ -0.45
CLCN1-201ENST00000343257 PRSS46E5RG02 174 aa12.23□□□□□ -0.45
CLCN1-201ENST00000343257 SS18L1O75177 396 aaPredicted RBP12.23□□□□□ -0.45
CLCN1-201ENST00000343257 IGHV3-48P01763 117 aa12.23□□□□□ -0.45
CLCN1-201ENST00000343257 FOLR3P41439 243 aa12.23□□□□□ -0.45
CLCN1-201ENST00000343257 UQCRFS1P47985 274 aa12.23□□□□□ -0.45
CLCN1-201ENST00000343257 RAB31Q13636 194 aa12.23□□□□□ -0.45
CLCN1-201ENST00000343257 ZNF146Q15072 292 aa12.23□□□□□ -0.45
CLCN1-201ENST00000343257 OR8B3Q8NGG8 313 aa12.23□□□□□ -0.45
CLCN1-201ENST00000343257 ZNF503Q96F45 646 aa12.23□□□□□ -0.45
CLCN1-201ENST00000343257 CHODLQ9H9P2 273 aa12.23□□□□□ -0.45
CLCN1-201ENST00000343257 CACNA1EQ15878 2313 aa12.23□□□□□ -0.45
CLCN1-201ENST00000343257 TNRC6AQ8NDV7 1962 aaKnown RBP12.23□□□□□ -0.45
CLCN1-201ENST00000343257 PSG9Q00887 426 aa12.23□□□□□ -0.45
CLCN1-201ENST00000343257 GABRA6Q16445 453 aa12.23□□□□□ -0.45
CLCN1-201ENST00000343257 SSX8Q7RTT4 187 aa12.23□□□□□ -0.45
CLCN1-201ENST00000343257 SLC25A40Q8TBP6 338 aa12.23□□□□□ -0.45
CLCN1-201ENST00000343257 SMIM27A0A1W2PRY6 76 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 AREGP15514 252 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 MAGEA5P43359 124 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 PNKDQ8N490 385 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 NUP35Q8NFH5 326 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 TMEM70Q9BUB7 260 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 ENY2Q9NPA8 101 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 LSM4Q9Y4Z0 139 aaKnown RBP12.22□□□□□ -0.45
CLCN1-201ENST00000343257 WDFY4Q6ZS81 3184 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 TRAV8-6A0A0B4J262 113 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 CYB561P49447 251 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 LRRC10Q5BKY1 277 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 BVES-AS1Q5T3Y7 98 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 MORN5Q5VZ52 161 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 SARAFQ96BY9 339 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 TRIB1Q96RU8 372 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 LY6G6EA0A0G2JKS1 128 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 GAGE12BA1L429 117 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 ISLRO14498 428 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 PPBPP02775 128 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 TCF24Q7RTU0 167 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 NUDT11Q96G61 164 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 WDR54Q9H977 334 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 U3KQA8 63 aa12.22□□□□□ -0.45
CLCN1-201ENST00000343257 TBR1Q16650 682 aa12.21□□□□□ -0.45
CLCN1-201ENST00000343257 Q8IYB0 196 aa12.21□□□□□ -0.45
CLCN1-201ENST00000343257 SNRNP40Q96DI7 357 aaKnown RBP12.21□□□□□ -0.45
CLCN1-201ENST00000343257 CSTL1Q9H114 145 aa12.21□□□□□ -0.45
CLCN1-201ENST00000343257 PLAUP00749 431 aa12.21□□□□□ -0.46
CLCN1-201ENST00000343257 CSN3P07498 182 aa12.21□□□□□ -0.46
CLCN1-201ENST00000343257 PYYP10082 97 aa12.21□□□□□ -0.46
CLCN1-201ENST00000343257 MPV17P39210 176 aa12.21□□□□□ -0.46
CLCN1-201ENST00000343257 SLC35E4Q6ICL7 350 aa12.21□□□□□ -0.46
CLCN1-201ENST00000343257 SMRP1Q8NCR6 262 aa12.21□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms