RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 CR1LQ2VPA4 569 aa7.93□□□□□ -1.14
HOXA1-201ENST00000343060 SMIM15Q7Z3B0 74 aa7.93□□□□□ -1.14
HOXA1-201ENST00000343060 VKORC1L1Q8N0U8 176 aa7.93□□□□□ -1.14
HOXA1-201ENST00000343060 DEFB125Q8N687 156 aa7.93□□□□□ -1.14
HOXA1-201ENST00000343060 GRAMD2BQ96HH9 432 aa7.93□□□□□ -1.14
HOXA1-201ENST00000343060 METRNQ9UJH8 293 aa7.93□□□□□ -1.14
HOXA1-201ENST00000343060 A0A1B0GXF2 115 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 HLA-DRB1P01911 266 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 PI4KAP42356 2102 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 HSPE1P61604 102 aaKnown RBP7.92□□□□□ -1.14
HOXA1-201ENST00000343060 VAMP3Q15836 100 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 OCIAD2Q56VL3 154 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 FAM162BQ5T6X4 162 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 ATP5L2Q7Z4Y8 100 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 SPEM1Q8N4L4 309 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 RFESDQ8TAC1 157 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 SLC25A40Q8TBP6 338 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 ZNF596Q8TC21 504 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 URB1-AS1Q96HZ7 61 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 TMEM70Q9BUB7 260 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 IFI27L2Q9H2X8 130 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 CST9LQ9H4G1 147 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 TRIOO75962 3097 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 ACTL6BO94805 426 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 CELA3BP08861 270 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 MGST1P10620 155 aaKnown RBP7.92□□□□□ -1.14
HOXA1-201ENST00000343060 OTX2P32243 289 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 MRPL49Q13405 166 aaKnown RBP7.92□□□□□ -1.14
HOXA1-201ENST00000343060 BVES-AS1Q5T3Y7 98 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 WDR82Q6UXN9 313 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 ZNF826PQ6ZT77 177 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 TPRX1Q8N7U7 411 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 NUP35Q8NFH5 326 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 OR4S2Q8NH73 311 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 FAM168AQ92567 244 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 S1PR3Q99500 378 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 MRPL32Q9BYC8 188 aaKnown RBP7.92□□□□□ -1.14
HOXA1-201ENST00000343060 SDK1Q7Z5N4 2213 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 DOCK10Q96BY6 2186 aa7.92□□□□□ -1.14
HOXA1-201ENST00000343060 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.91□□□□□ -1.14
HOXA1-201ENST00000343060 IGHV3-64DA0A0J9YX35 117 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 M0QZ24 198 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 CA1P00915 261 aaPredicted RBP7.91□□□□□ -1.14
HOXA1-201ENST00000343060 POU2AF1Q16633 256 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 RNF151Q2KHN1 245 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 SPINK14Q6IE38 97 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 KIR3DL3Q8N743 410 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 CXXC4Q9H2H0 198 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 C7orf69Q9H7B7 122 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 SERTAD4Q9NUC0 356 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 CACNA1DQ01668 2161 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 TMEM265A0A087WTH1 108 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 PSMB11A5LHX3 300 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 K7ESF4 209 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 F2RL2O00254 374 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 OR7C2O60412 319 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 TFF1P04155 84 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 C8orf88P0DMB2 117 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 MFAP2P55001 183 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 RPL8P62917 257 aaKnown RBP7.91□□□□□ -1.14
HOXA1-201ENST00000343060 SMIM21Q3B7S5 101 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 MPV17L2Q567V2 206 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 RPL39P5Q59GN2 51 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 ETFRF1Q6IPR1 90 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 RNASEKQ6P5S7 137 aaKnown RBP7.91□□□□□ -1.14
HOXA1-201ENST00000343060 FAM167A-AS1Q96KT0 104 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 SLC25A33Q9BSK2 321 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 DCTN5Q9BTE1 182 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 CHRDL1Q9BU40 450 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 PLEKHA3Q9HB20 300 aa7.91□□□□□ -1.14
HOXA1-201ENST00000343060 IGKV1OR2-108A0A075B7D4 117 aa7.9□□□□□ -1.14
HOXA1-201ENST00000343060 OR4C46A6NHA9 309 aa7.9□□□□□ -1.14
HOXA1-201ENST00000343060 MPV17P39210 176 aa7.9□□□□□ -1.14
HOXA1-201ENST00000343060 ATP5IP56385 69 aaPredicted RBP7.9□□□□□ -1.14
HOXA1-201ENST00000343060 LOXL3P58215 753 aa7.9□□□□□ -1.14
HOXA1-201ENST00000343060 HOXA4Q00056 320 aaPredicted RBP7.9□□□□□ -1.14
HOXA1-201ENST00000343060 LDLRAD2Q5SZI1 272 aa7.9□□□□□ -1.14
HOXA1-201ENST00000343060 TRIB1Q96RU8 372 aa7.9□□□□□ -1.14
HOXA1-201ENST00000343060 TTTY12Q9BZ98 90 aa7.9□□□□□ -1.14
HOXA1-201ENST00000343060 IDI2-AS1Q9NZ38 188 aa7.9□□□□□ -1.14
HOXA1-201ENST00000343060 TOX4O94842 621 aa7.9□□□□□ -1.15
HOXA1-201ENST00000343060 CA7P43166 264 aa7.9□□□□□ -1.15
HOXA1-201ENST00000343060 MAGEA5P43359 124 aa7.9□□□□□ -1.15
HOXA1-201ENST00000343060 OR4A47Q6IF82 309 aa7.9□□□□□ -1.15
HOXA1-201ENST00000343060 C12orf54Q6X4T0 127 aa7.9□□□□□ -1.15
HOXA1-201ENST00000343060 CD177Q8N6Q3 437 aa7.9□□□□□ -1.15
HOXA1-201ENST00000343060 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.9□□□□□ -1.15
HOXA1-201ENST00000343060 CHCHD1Q96BP2 118 aaKnown RBP7.9□□□□□ -1.15
HOXA1-201ENST00000343060 SNRNP40Q96DI7 357 aaKnown RBP7.9□□□□□ -1.15
HOXA1-201ENST00000343060 SSBP3Q9BWW4 388 aaPredicted RBP7.9□□□□□ -1.15
HOXA1-201ENST00000343060 ENY2Q9NPA8 101 aa7.9□□□□□ -1.15
HOXA1-201ENST00000343060 GNG12Q9UBI6 72 aa7.9□□□□□ -1.15
HOXA1-201ENST00000343060 DOCK7Q96N67 2140 aa7.9□□□□□ -1.15
HOXA1-201ENST00000343060 PSG1P11464 419 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 LYSMD4Q5XG99 296 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 SLC25A34Q6PIV7 304 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 TMEM251Q8N6I4 163 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 NUDT10Q8NFP7 164 aa7.89□□□□□ -1.15
HOXA1-201ENST00000343060 KLF14Q8TD94 323 aaPredicted RBP7.89□□□□□ -1.15
HOXA1-201ENST00000343060 FAM122AQ96E09 287 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms