RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 FAM90A27PA6NNH2 459 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 FOXH1O75593 365 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 C8orf88P0DMB2 117 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 ZNF124Q15973 351 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 ASCL4Q6XD76 172 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 MUC21A0A0G2JKD1 596 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 MUC21A0A140T8X8 626 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 A0A1W2PN81 502 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 ETV2O00321 342 aaPredicted RBP10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 RPL8P62917 257 aaKnown RBP10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 MUC21Q5SSG8 566 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 TREML4Q6UXN2 200 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 UNQ6494/PRO21346Q6UXR6 183 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 OR8A1Q8NGG7 326 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 TMEM106BQ9NUM4 274 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 DENND4AQ7Z401 1863 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 TRAV1-1A0A0B4J248 108 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 IGHV3-35A0A0C4DH35 117 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 A0A1B0GW64 132 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 FOXI3A8MTJ6 420 aaPredicted RBP10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 EREGO14944 169 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 MLANAQ16655 118 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 TMEM14EPQ6UXP3 125 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 IL36BQ9NZH7 164 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 S4R3C0 116 aa10.36□□□□□ -0.75
SNRNP48-201ENST00000342415 OR9G1Q8NH87 305 aa10.35□□□□□ -0.75
SNRNP48-201ENST00000342415 PMCHL2Q9BQD1 86 aa10.35□□□□□ -0.75
SNRNP48-201ENST00000342415 DNAJC4Q9NNZ3 241 aa10.35□□□□□ -0.75
SNRNP48-201ENST00000342415 WDR83OSQ9Y284 106 aa10.35□□□□□ -0.75
SNRNP48-201ENST00000342415 CSPG4Q6UVK1 2322 aa10.35□□□□□ -0.75
SNRNP48-201ENST00000342415 DPRXA6NFQ7 191 aa10.35□□□□□ -0.75
SNRNP48-201ENST00000342415 OR8B2Q96RD0 313 aa10.35□□□□□ -0.75
SNRNP48-201ENST00000342415 INSIG2Q9Y5U4 225 aa10.35□□□□□ -0.75
SNRNP48-201ENST00000342415 MED12LQ86YW9 2145 aa10.35□□□□□ -0.75
SNRNP48-201ENST00000342415 HIST1H1EP10412 219 aaKnown RBP10.35□□□□□ -0.75
SNRNP48-201ENST00000342415 EFNB3Q15768 340 aa10.35□□□□□ -0.75
SNRNP48-201ENST00000342415 TEX38Q6PEX7 206 aa10.35□□□□□ -0.75
SNRNP48-201ENST00000342415 FOXL2NBQ6ZUU3 175 aa10.35□□□□□ -0.75
SNRNP48-201ENST00000342415 HAPLN4Q86UW8 402 aa10.35□□□□□ -0.75
SNRNP48-201ENST00000342415 SPRR3Q9UBC9 169 aa10.35□□□□□ -0.75
SNRNP48-201ENST00000342415 JPT1Q9UK76 154 aa10.35□□□□□ -0.75
SNRNP48-201ENST00000342415 OR2J3O76001 311 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 PYYP10082 97 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 DUTP33316 252 aaKnown RBP10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 FAM27E3Q08E93 113 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 PRSS8Q16651 343 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 LBHQ53QV2 105 aaPredicted RBP10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 Q6P435 159 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 C9orf106Q8NAJ2 232 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 OR10W1Q8NGF6 305 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 CD99P14209 185 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 NRN1Q9NPD7 142 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 TMEM242Q9NWH2 141 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 NUP210Q8TEM1 1887 aaPredicted RBP10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 TRAV5A0A0B4J249 113 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 RBFOX2O43251 390 aaKnown RBP eCLIP10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 SCGB2A1O75556 95 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 HLA-DQA1P01909 254 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 FTH1P19P0C7X4 201 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 CCL3L1P16619 93 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 UQCRFS1P47985 274 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 PCP4P48539 62 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 MMDQ15546 238 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 NRN1LQ496H8 165 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 OR5R1Q8NH85 324 aa10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 GTF3AQ92664 365 aaKnown RBP10.34□□□□□ -0.75
SNRNP48-201ENST00000342415 FBLL1A6NHQ2 334 aaKnown RBP10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 CLEC3BP05452 202 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 PFN1P07737 140 aaKnown RBP10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 MORN2Q502X0 79 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 LEMD1Q68G75 181 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 KIR3DL3Q8N743 410 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 OR4B1Q8NGF8 309 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 VSTM2AQ8TAG5 236 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 TNFRSF19Q9NS68 423 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 UQCR10Q9UDW1 63 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 J3KRW8 73 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 NTN3O00634 580 aaPredicted RBP10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 IGLV3-1P01715 115 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 SP9P0CG40 484 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 MAS1LP35410 378 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 TMEM177Q53S58 311 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 C10orf55Q5SWW7 151 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 LYPD6BQ8NI32 183 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 SSC4DQ8WTU2 575 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 EAF1Q96JC9 268 aaPredicted RBP10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 TXNDC17Q9BRA2 123 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 GGTLC1Q9BX51 225 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 EML6Q6ZMW3 1958 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 PRR33A8MZF0 331 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 MT-ND6P03923 174 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 GNG5P63218 68 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 RELBQ01201 579 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 OR4F17Q8NGA8 305 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 COQ2Q96H96 371 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 IER2Q9BTL4 223 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 ZNRD1Q9P1U0 126 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 IGKV3D-15A0A087WSY6 115 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 SAA2-SAA4A0A096LPE2 208 aa10.33□□□□□ -0.76
SNRNP48-201ENST00000342415 LY6G6EA0A0G2JKS1 128 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms