RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 A0A1W2PN81 502 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 CHRNA7P36544 502 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 OR10X1Q8NGY0 326 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 MS4A10Q96PG2 267 aa10.76□□□□□ -0.69
COL18A1-201ENST00000342220 CIB3Q96Q77 187 aaPredicted RBP10.76□□□□□ -0.69
COL18A1-201ENST00000342220 B9A039 149 aa10.75□□□□□ -0.69
COL18A1-201ENST00000342220 S1PR2O95136 353 aa10.75□□□□□ -0.69
COL18A1-201ENST00000342220 IGLV2-14P01704 120 aa10.75□□□□□ -0.69
COL18A1-201ENST00000342220 OR5G3P0C626 314 aa10.75□□□□□ -0.69
COL18A1-201ENST00000342220 ARF6P62330 175 aa10.75□□□□□ -0.69
COL18A1-201ENST00000342220 GNB2P62879 340 aa10.75□□□□□ -0.69
COL18A1-201ENST00000342220 SLC35E4Q6ICL7 350 aa10.75□□□□□ -0.69
COL18A1-201ENST00000342220 MOB1BQ7L9L4 216 aa10.75□□□□□ -0.69
COL18A1-201ENST00000342220 NUP37Q8NFH4 326 aa10.75□□□□□ -0.69
COL18A1-201ENST00000342220 RAB40CQ96S21 281 aa10.75□□□□□ -0.69
COL18A1-201ENST00000342220 FUT9Q9Y231 359 aa10.75□□□□□ -0.69
COL18A1-201ENST00000342220 CD55P08174 381 aa10.75□□□□□ -0.69
COL18A1-201ENST00000342220 ZNF726P1Q15940 193 aa10.75□□□□□ -0.69
COL18A1-201ENST00000342220 ZNF672Q499Z4 452 aaPredicted RBP10.75□□□□□ -0.69
COL18A1-201ENST00000342220 SCGB1C1Q8TD33 95 aa10.75□□□□□ -0.69
COL18A1-201ENST00000342220 GAFA1Q96PS6 74 aa10.75□□□□□ -0.69
COL18A1-201ENST00000342220 PSENENQ9NZ42 101 aa10.75□□□□□ -0.69
COL18A1-201ENST00000342220 JKAMPQ9P055 326 aa10.75□□□□□ -0.69
COL18A1-201ENST00000342220 A0A1W2PPR1 153 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 K7EP13 123 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 SYNGR2O43760 224 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 IGKV1-5P01602 117 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 GZMHP20718 246 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 DPPA3Q6W0C5 159 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 HAPLN4Q86UW8 402 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 OR6C3Q9NZP0 311 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 CSMD2Q7Z408 3487 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 TRBV6-6A0A0A6YYG2 114 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 CEBPZOSA8MTT3 80 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 TMEM178BH3BS89 294 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 CD24P25063 80 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 ZNF134P52741 427 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 PRSS8Q16651 343 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 FAM90A2PQ658T7 463 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 ZNF787Q6DD87 383 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 STPG4Q8N801 248 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 RAB1BQ9H0U4 201 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 CELSR1Q9NYQ6 3014 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 MTORP42345 2549 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 CATR1Q13166 79 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 C1orf174Q8IYL3 243 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 SRD5A3Q9H8P0 318 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 HES4Q9HCC6 221 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 MYO9AB2RTY4 2548 aa10.74□□□□□ -0.69
COL18A1-201ENST00000342220 NAV3Q8IVL0 2385 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 LOC105371242A0A075B767 164 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 PPP5D1E7EU14 171 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 NDUFB8O95169 186 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 MRPL52Q86TS9 123 aaKnown RBP10.73□□□□□ -0.69
COL18A1-201ENST00000342220 ZNF525Q8N782 197 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 RNF2Q99496 336 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 CSTL1Q9H114 145 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 CLN8Q9UBY8 286 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 TRBV24-1A0A075B6N3 115 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 hADV38S2A0JD32 116 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 LINC00473A8K010 186 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 SLC25A6P12236 298 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 RPL19P84098 196 aaKnown RBP10.73□□□□□ -0.69
COL18A1-201ENST00000342220 UBE2V1Q13404 147 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 ZNF585BQ52M93 769 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 H2BFWTQ7Z2G1 175 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 ITLN2Q8WWU7 325 aaPredicted RBP10.73□□□□□ -0.69
COL18A1-201ENST00000342220 CORO2AQ92828 525 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 TRAV1-1A0A0B4J248 108 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 A0A1B0GUS0 222 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 BCL2P10415 239 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 HIPK2Q9H2X6 1198 aa10.73□□□□□ -0.69
COL18A1-201ENST00000342220 ANKRD17O75179 2603 aaKnown RBP10.72□□□□□ -0.69
COL18A1-201ENST00000342220 IGHV3OR16-10A0A075B7F0 116 aa10.72□□□□□ -0.69
COL18A1-201ENST00000342220 CDC34P49427 236 aaPredicted RBP10.72□□□□□ -0.69
COL18A1-201ENST00000342220 LDLRAD2Q5SZI1 272 aa10.72□□□□□ -0.69
COL18A1-201ENST00000342220 LIN7CQ9NUP9 197 aaKnown RBP10.72□□□□□ -0.69
COL18A1-201ENST00000342220 CTSZQ9UBR2 303 aa10.72□□□□□ -0.69
COL18A1-201ENST00000342220 TRAV34A0A0B4J273 112 aa10.72□□□□□ -0.69
COL18A1-201ENST00000342220 MYOD1P15172 320 aa10.72□□□□□ -0.69
COL18A1-201ENST00000342220 LSM10Q969L4 123 aaKnown RBP10.72□□□□□ -0.69
COL18A1-201ENST00000342220 S1PR3Q99500 378 aa10.72□□□□□ -0.69
COL18A1-201ENST00000342220 VAMP8Q9BV40 100 aa10.72□□□□□ -0.69
COL18A1-201ENST00000342220 PPBPP02775 128 aa10.71□□□□□ -0.69
COL18A1-201ENST00000342220 RND2P52198 227 aa10.71□□□□□ -0.69
COL18A1-201ENST00000342220 MORN2Q502X0 79 aa10.71□□□□□ -0.69
COL18A1-201ENST00000342220 STUMQ69YW2 141 aa10.71□□□□□ -0.69
COL18A1-201ENST00000342220 ACY3Q96HD9 319 aa10.71□□□□□ -0.69
COL18A1-201ENST00000342220 OR4C12Q96R67 309 aa10.71□□□□□ -0.69
COL18A1-201ENST00000342220 DIAPH2-AS1Q14236 149 aa10.71□□□□□ -0.69
COL18A1-201ENST00000342220 COA6Q5JTJ3 125 aaKnown RBP10.71□□□□□ -0.69
COL18A1-201ENST00000342220 UNQ5815/PRO19632Q6UWF5 114 aa10.71□□□□□ -0.69
COL18A1-201ENST00000342220 ERASQ7Z444 233 aa10.71□□□□□ -0.69
COL18A1-201ENST00000342220 ZDHHC16Q969W1 377 aa10.71□□□□□ -0.69
COL18A1-201ENST00000342220 ZNF714Q96N38 554 aa10.71□□□□□ -0.69
COL18A1-201ENST00000342220 MBNL3Q9NUK0 354 aaKnown RBP10.71□□□□□ -0.69
COL18A1-201ENST00000342220 B4DEV8 164 aa10.71□□□□□ -0.7
COL18A1-201ENST00000342220 F6UZH7 168 aa10.71□□□□□ -0.7
COL18A1-201ENST00000342220 TMEM183BQ1AE95 376 aa10.71□□□□□ -0.7
COL18A1-201ENST00000342220 LRRC75BQ2VPJ9 315 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms