RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 C9JCJ5 164 aa11.87□□□□□ -0.51
TDP2-201ENST00000341060 FOXH1O75593 365 aa11.87□□□□□ -0.51
TDP2-201ENST00000341060 SAA1P0DJI8 122 aaPredicted RBP11.87□□□□□ -0.51
TDP2-201ENST00000341060 GZMBP10144 247 aa11.87□□□□□ -0.51
TDP2-201ENST00000341060 AREGP15514 252 aa11.87□□□□□ -0.51
TDP2-201ENST00000341060 NDUFB7P17568 137 aa11.87□□□□□ -0.51
TDP2-201ENST00000341060 PRSS8Q16651 343 aa11.87□□□□□ -0.51
TDP2-201ENST00000341060 C2orf83Q53S99 150 aa11.87□□□□□ -0.51
TDP2-201ENST00000341060 SLC45A2Q9UMX9 530 aa11.87□□□□□ -0.51
TDP2-201ENST00000341060 MSRB2Q9Y3D2 182 aa11.87□□□□□ -0.51
TDP2-201ENST00000341060 NCOR2Q9Y618 2525 aa11.87□□□□□ -0.51
TDP2-201ENST00000341060 CHD8Q9HCK8 2581 aa11.87□□□□□ -0.51
TDP2-201ENST00000341060 IGKV1OR2-108A0A075B7D4 117 aa11.87□□□□□ -0.51
TDP2-201ENST00000341060 TEX50A0A1B0GTY4 177 aa11.87□□□□□ -0.51
TDP2-201ENST00000341060 DEFA6Q01524 100 aa11.87□□□□□ -0.51
TDP2-201ENST00000341060 OSR1Q8TAX0 266 aaPredicted RBP11.87□□□□□ -0.51
TDP2-201ENST00000341060 UHRF2Q96PU4 802 aa11.87□□□□□ -0.51
TDP2-201ENST00000341060 TRAPPC1Q9Y5R8 145 aa11.87□□□□□ -0.51
TDP2-201ENST00000341060 LY96Q9Y6Y9 160 aa11.87□□□□□ -0.51
TDP2-201ENST00000341060 C17orf100A8MU93 164 aa11.86□□□□□ -0.51
TDP2-201ENST00000341060 TSTD3H0UI37 97 aa11.86□□□□□ -0.51
TDP2-201ENST00000341060 MEF2CQ06413 473 aaPredicted RBP11.86□□□□□ -0.51
TDP2-201ENST00000341060 MIR17HGQ75NE6 70 aa11.86□□□□□ -0.51
TDP2-201ENST00000341060 OR10G8Q8NGN5 311 aa11.86□□□□□ -0.51
TDP2-201ENST00000341060 OR1L8Q8NGR8 309 aa11.86□□□□□ -0.51
TDP2-201ENST00000341060 RND1Q92730 232 aa11.86□□□□□ -0.51
TDP2-201ENST00000341060 SLC35E1Q96K37 410 aa11.86□□□□□ -0.51
TDP2-201ENST00000341060 NABP2Q9BQ15 211 aa11.86□□□□□ -0.51
TDP2-201ENST00000341060 K7EN84 100 aa11.86□□□□□ -0.51
TDP2-201ENST00000341060 COL8A2P25067 703 aa11.86□□□□□ -0.51
TDP2-201ENST00000341060 ADIPOQQ15848 244 aa11.86□□□□□ -0.51
TDP2-201ENST00000341060 MOB3BQ86TA1 216 aa11.86□□□□□ -0.51
TDP2-201ENST00000341060 TMEM18Q96B42 140 aa11.86□□□□□ -0.51
TDP2-201ENST00000341060 FAM122AQ96E09 287 aa11.86□□□□□ -0.51
TDP2-201ENST00000341060 TMEM167BQ9NRX6 74 aa11.86□□□□□ -0.51
TDP2-201ENST00000341060 MAP1BP46821 2468 aaKnown RBP11.85□□□□□ -0.51
TDP2-201ENST00000341060 TRAV9-1A0A075B6T8 112 aa11.85□□□□□ -0.51
TDP2-201ENST00000341060 A0A0G2JNJ9 132 aa11.85□□□□□ -0.51
TDP2-201ENST00000341060 C16orf97H3BN30 126 aa11.85□□□□□ -0.51
TDP2-201ENST00000341060 ACTL6BO94805 426 aa11.85□□□□□ -0.51
TDP2-201ENST00000341060 GCGP01275 180 aa11.85□□□□□ -0.51
TDP2-201ENST00000341060 RNASE2P10153 161 aaKnown RBP11.85□□□□□ -0.51
TDP2-201ENST00000341060 HNF1AP20823 631 aa11.85□□□□□ -0.51
TDP2-201ENST00000341060 SPACA3Q8IXA5 215 aa11.85□□□□□ -0.51
TDP2-201ENST00000341060 ZNF714Q96N38 554 aa11.85□□□□□ -0.51
TDP2-201ENST00000341060 Q9UFV3 132 aa11.85□□□□□ -0.51
TDP2-201ENST00000341060 APOA2P02652 100 aa11.84□□□□□ -0.51
TDP2-201ENST00000341060 OR4A8P0C604 315 aa11.84□□□□□ -0.51
TDP2-201ENST00000341060 YPEL3P61236 119 aaPredicted RBP11.84□□□□□ -0.51
TDP2-201ENST00000341060 PNKDQ8N490 385 aa11.84□□□□□ -0.51
TDP2-201ENST00000341060 GBGT1Q8N5D6 347 aa11.84□□□□□ -0.51
TDP2-201ENST00000341060 HARBI1Q96MB7 349 aa11.84□□□□□ -0.51
TDP2-201ENST00000341060 C19orf24Q9BVV8 132 aa11.84□□□□□ -0.51
TDP2-201ENST00000341060 MRPL20Q9BYC9 149 aaKnown RBP11.84□□□□□ -0.51
TDP2-201ENST00000341060 ZMAT5Q9UDW3 170 aaKnown RBP11.84□□□□□ -0.51
TDP2-201ENST00000341060 DPRXA6NFQ7 191 aa11.84□□□□□ -0.51
TDP2-201ENST00000341060 H0YJW9 148 aa11.84□□□□□ -0.51
TDP2-201ENST00000341060 FCN3O75636 299 aa11.84□□□□□ -0.51
TDP2-201ENST00000341060 OR5G3P0C626 314 aa11.84□□□□□ -0.51
TDP2-201ENST00000341060 PAX1P15863 534 aa11.84□□□□□ -0.51
TDP2-201ENST00000341060 DDTP30046 118 aa11.84□□□□□ -0.51
TDP2-201ENST00000341060 GPX4P36969 197 aaPredicted RBP11.84□□□□□ -0.51
TDP2-201ENST00000341060 PSG5Q15238 335 aa11.84□□□□□ -0.51
TDP2-201ENST00000341060 PQLC2Q6ZP29 291 aa11.84□□□□□ -0.51
TDP2-201ENST00000341060 DOLPP1Q86YN1 238 aa11.84□□□□□ -0.51
TDP2-201ENST00000341060 OR5AN1Q8NGI8 311 aa11.84□□□□□ -0.51
TDP2-201ENST00000341060 EAF1Q96JC9 268 aaPredicted RBP11.84□□□□□ -0.51
TDP2-201ENST00000341060 TECRQ9NZ01 308 aaKnown RBP11.84□□□□□ -0.51
TDP2-201ENST00000341060 PCNX1Q96RV3 2341 aa11.84□□□□□ -0.51
TDP2-201ENST00000341060 CCL3L1P16619 93 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 OR10J1P30954 320 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 CD69Q07108 199 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 BSPH1Q075Z2 132 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 HLA-DRB5Q30154 266 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 TMEM177Q53S58 311 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 WFDC8Q8IUA0 241 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 ZCCHC24Q8N2G6 241 aaKnown RBP11.83□□□□□ -0.52
TDP2-201ENST00000341060 ZNF503Q96F45 646 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 C14orf144Q96I85 54 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 SAP30LQ9HAJ7 183 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 NDUFA4L2Q9NRX3 87 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 IL36BQ9NZH7 164 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 NAV3Q8IVL0 2385 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 ROS1P08922 2347 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 ARFGEF3Q5TH69 2177 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 INS-IGF2F8WCM5 200 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 PRRG2O14669 202 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 TDGF1P3P51864 188 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 OR10W1Q8NGF6 305 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 COMMD5Q9GZQ3 224 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 PRO1933Q9H354 126 aa11.83□□□□□ -0.52
TDP2-201ENST00000341060 GATA2P23769 480 aaPredicted RBP11.82□□□□□ -0.52
TDP2-201ENST00000341060 TAS2R45P59539 299 aa11.82□□□□□ -0.52
TDP2-201ENST00000341060 RPL8P62917 257 aaKnown RBP11.82□□□□□ -0.52
TDP2-201ENST00000341060 TMEM200BQ69YZ2 307 aa11.82□□□□□ -0.52
TDP2-201ENST00000341060 CACNG8Q8WXS5 425 aa11.82□□□□□ -0.52
TDP2-201ENST00000341060 PPIAL4EA0A075B759 164 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 PPIAL4DF5H284 164 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 MKRN2OSH3BPM6 223 aa11.81□□□□□ -0.52
TDP2-201ENST00000341060 TMEM178BH3BS89 294 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms