RNA–Protein interactions for RNA: ENST00000340552.4

LIMK2-203, Transcript of LIM domain kinase 2, humanhuman

TSL 1 (best) BASIC

Gene LIMK2, Length 2,789 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-203ENST00000340552 C11orf52Q96A22 123 aa12.7□□□□□ -0.38
LIMK2-203ENST00000340552 TMEM45BQ96B21 275 aa12.7□□□□□ -0.38
LIMK2-203ENST00000340552 ARL2-SNX15V9GYD0 113 aa12.7□□□□□ -0.38
LIMK2-203ENST00000340552 IGKV3D-15A0A087WSY6 115 aa12.7□□□□□ -0.38
LIMK2-203ENST00000340552 GAGE10A6NGK3 116 aa12.7□□□□□ -0.38
LIMK2-203ENST00000340552 MRPL33O75394 65 aaKnown RBP12.7□□□□□ -0.38
LIMK2-203ENST00000340552 IGHV3-9P01782 118 aa12.7□□□□□ -0.38
LIMK2-203ENST00000340552 PPIAL4GP0DN37 164 aa12.7□□□□□ -0.38
LIMK2-203ENST00000340552 CENPWQ5EE01 88 aa12.7□□□□□ -0.38
LIMK2-203ENST00000340552 IGF2-ASQ6U949 168 aa12.7□□□□□ -0.38
LIMK2-203ENST00000340552 DRAM1Q8N682 238 aa12.7□□□□□ -0.38
LIMK2-203ENST00000340552 A0A087X0K7 114 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 GNG7O60262 68 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 OR10J4P0C629 311 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 P0C879 139 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 C3AR1Q16581 482 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 RNASEKQ6P5S7 137 aaKnown RBP12.69□□□□□ -0.38
LIMK2-203ENST00000340552 SPACA3Q8IXA5 215 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 TMEM178AQ8NBL3 297 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 PRRG4Q9BZD6 226 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 COMMD5Q9GZQ3 224 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 DEFB127Q9H1M4 99 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 USF1P22415 310 aaPredicted RBP12.69□□□□□ -0.38
LIMK2-203ENST00000340552 CD1BP29016 333 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 GPM6AP51674 278 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 TMEM70Q9BUB7 260 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 TNFRSF19Q9NS68 423 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 SPINK2P20155 84 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 GCHFRP30047 84 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 ZNF816Q0VGE8 651 aaPredicted RBP12.69□□□□□ -0.38
LIMK2-203ENST00000340552 TUSC5Q8IXB3 177 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 FDCSPQ8NFU4 85 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 CHRDL1Q9BU40 450 aa12.69□□□□□ -0.38
LIMK2-203ENST00000340552 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.69□□□□□ -0.38
LIMK2-203ENST00000340552 TRBV6-6A0A0A6YYG2 114 aa12.68□□□□□ -0.38
LIMK2-203ENST00000340552 C7orf71A4D174 169 aa12.68□□□□□ -0.38
LIMK2-203ENST00000340552 C15orf62A8K5M9 175 aa12.68□□□□□ -0.38
LIMK2-203ENST00000340552 GPR6P46095 362 aaPredicted RBP12.68□□□□□ -0.38
LIMK2-203ENST00000340552 GNG4P50150 75 aa12.68□□□□□ -0.38
LIMK2-203ENST00000340552 KRTAP27-1Q3LI81 207 aa12.68□□□□□ -0.38
LIMK2-203ENST00000340552 RNFT1Q5M7Z0 435 aa12.68□□□□□ -0.38
LIMK2-203ENST00000340552 MIC13Q5XKP0 118 aa12.68□□□□□ -0.38
LIMK2-203ENST00000340552 PQLC2Q6ZP29 291 aa12.68□□□□□ -0.38
LIMK2-203ENST00000340552 ZNF488Q96MN9 340 aa12.68□□□□□ -0.38
LIMK2-203ENST00000340552 FNDC4Q9H6D8 234 aaPredicted RBP12.68□□□□□ -0.38
LIMK2-203ENST00000340552 GVINP1Q7Z2Y8 2422 aa12.68□□□□□ -0.38
LIMK2-203ENST00000340552 TRAV24A0A0B4J272 114 aa12.68□□□□□ -0.38
LIMK2-203ENST00000340552 FAM231BA6NCW3 169 aa12.68□□□□□ -0.38
LIMK2-203ENST00000340552 TM4SF5O14894 197 aa12.68□□□□□ -0.38
LIMK2-203ENST00000340552 FOXE3Q13461 319 aa12.68□□□□□ -0.38
LIMK2-203ENST00000340552 SPATA31B1PQ5VZV4 182 aa12.68□□□□□ -0.38
LIMK2-203ENST00000340552 FGFBP3Q8TAT2 258 aa12.68□□□□□ -0.38
LIMK2-203ENST00000340552 ZNF391Q9UJN7 358 aa12.68□□□□□ -0.38
LIMK2-203ENST00000340552 CEP250Q9BV73 2442 aa12.67□□□□□ -0.38
LIMK2-203ENST00000340552 SH2D7A6NKC9 451 aaPredicted RBP12.67□□□□□ -0.38
LIMK2-203ENST00000340552 CGAP01215 116 aa12.67□□□□□ -0.38
LIMK2-203ENST00000340552 NPVFQ9HCQ7 196 aa12.67□□□□□ -0.38
LIMK2-203ENST00000340552 OSTCQ9NRP0 149 aa12.67□□□□□ -0.38
LIMK2-203ENST00000340552 ZFHX4Q86UP3 3567 aa12.67□□□□□ -0.38
LIMK2-203ENST00000340552 SMIM27A0A1W2PRY6 76 aa12.67□□□□□ -0.38
LIMK2-203ENST00000340552 NPIPB11E5RHQ5 1161 aa12.67□□□□□ -0.38
LIMK2-203ENST00000340552 ZNHIT1O43257 154 aa12.67□□□□□ -0.38
LIMK2-203ENST00000340552 SYNGR1O43759 233 aa12.67□□□□□ -0.38
LIMK2-203ENST00000340552 CA1P00915 261 aaPredicted RBP12.67□□□□□ -0.38
LIMK2-203ENST00000340552 CRYBB3P26998 211 aa12.67□□□□□ -0.38
LIMK2-203ENST00000340552 RPL8P62917 257 aaKnown RBP12.67□□□□□ -0.38
LIMK2-203ENST00000340552 FAM120AOSQ5T036 256 aa12.67□□□□□ -0.38
LIMK2-203ENST00000340552 OR2T6Q8NHC8 308 aa12.67□□□□□ -0.38
LIMK2-203ENST00000340552 CLCF1Q9UBD9 225 aa12.67□□□□□ -0.38
LIMK2-203ENST00000340552 ZNF835Q9Y2P0 537 aa12.67□□□□□ -0.38
LIMK2-203ENST00000340552 TRGV5A0A0B4J1U4 118 aa12.66□□□□□ -0.38
LIMK2-203ENST00000340552 TRAPPC2LH3BP13 241 aa12.66□□□□□ -0.38
LIMK2-203ENST00000340552 FOXH1O75593 365 aa12.66□□□□□ -0.38
LIMK2-203ENST00000340552 GABRA6Q16445 453 aa12.66□□□□□ -0.38
LIMK2-203ENST00000340552 SPATA46Q5T0L3 261 aa12.66□□□□□ -0.38
LIMK2-203ENST00000340552 ASPHD1Q5U4P2 390 aa12.66□□□□□ -0.38
LIMK2-203ENST00000340552 LINC00173Q6ZV60 143 aa12.66□□□□□ -0.38
LIMK2-203ENST00000340552 LINC00470Q9BZP3 86 aa12.66□□□□□ -0.38
LIMK2-203ENST00000340552 SCRT2Q9NQ03 307 aa12.66□□□□□ -0.38
LIMK2-203ENST00000340552 PTPRZ1P23471 2315 aaPredicted RBP12.66□□□□□ -0.38
LIMK2-203ENST00000340552 OPRK1P41145 380 aa12.66□□□□□ -0.38
LIMK2-203ENST00000340552 GDF5OSQ5U4N7 250 aa12.66□□□□□ -0.38
LIMK2-203ENST00000340552 NEGR1Q7Z3B1 354 aa12.66□□□□□ -0.38
LIMK2-203ENST00000340552 SPSB4Q96A44 273 aa12.66□□□□□ -0.38
LIMK2-203ENST00000340552 JMJD8Q96S16 334 aa12.66□□□□□ -0.38
LIMK2-203ENST00000340552 MGST2Q99735 147 aa12.66□□□□□ -0.38
LIMK2-203ENST00000340552 DLL3Q9NYJ7 618 aa12.66□□□□□ -0.38
LIMK2-203ENST00000340552 DOCK7Q96N67 2140 aa12.66□□□□□ -0.38
LIMK2-203ENST00000340552 HELTA6NFD8 242 aa12.65□□□□□ -0.38
LIMK2-203ENST00000340552 PCBD1P61457 104 aa12.65□□□□□ -0.38
LIMK2-203ENST00000340552 RPL30P62888 115 aaKnown RBP12.65□□□□□ -0.38
LIMK2-203ENST00000340552 URB1-AS1Q96HZ7 61 aa12.65□□□□□ -0.38
LIMK2-203ENST00000340552 OR2H1Q9GZK4 316 aa12.65□□□□□ -0.38
LIMK2-203ENST00000340552 HIST1H1AQ02539 215 aaPredicted RBP12.65□□□□□ -0.38
LIMK2-203ENST00000340552 C9orf135Q5VTT2 229 aa12.65□□□□□ -0.38
LIMK2-203ENST00000340552 TREML4Q6UXN2 200 aa12.65□□□□□ -0.38
LIMK2-203ENST00000340552 GGTLC1Q9BX51 225 aa12.65□□□□□ -0.38
LIMK2-203ENST00000340552 ZNF331Q9NQX6 463 aaPredicted RBP12.65□□□□□ -0.38
LIMK2-203ENST00000340552 SERTAD4Q9NUC0 356 aa12.65□□□□□ -0.38
LIMK2-203ENST00000340552 SPRR3Q9UBC9 169 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms