RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 SLC35G3Q8N808 338 aa11.73□□□□□ -0.53
UBE3B-201ENST00000340074 C7orf50Q9BRJ6 194 aaKnown RBP11.73□□□□□ -0.53
UBE3B-201ENST00000340074 CCDC32Q9BV29 185 aa11.73□□□□□ -0.53
UBE3B-201ENST00000340074 S4R3C0 116 aa11.73□□□□□ -0.53
UBE3B-201ENST00000340074 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.72□□□□□ -0.53
UBE3B-201ENST00000340074 SEC14L6B5MCN3 397 aa11.72□□□□□ -0.53
UBE3B-201ENST00000340074 OVOL1O14753 267 aa11.72□□□□□ -0.53
UBE3B-201ENST00000340074 PLA2G10O15496 165 aa11.72□□□□□ -0.53
UBE3B-201ENST00000340074 NDUFB6O95139 128 aa11.72□□□□□ -0.53
UBE3B-201ENST00000340074 IGHV3-23P01764 117 aa11.72□□□□□ -0.53
UBE3B-201ENST00000340074 CENPSQ8N2Z9 138 aa11.72□□□□□ -0.53
UBE3B-201ENST00000340074 IL22RA2Q969J5 263 aa11.72□□□□□ -0.53
UBE3B-201ENST00000340074 F11RQ9Y624 299 aaKnown RBP11.72□□□□□ -0.53
UBE3B-201ENST00000340074 IFNA17P01571 189 aa11.71□□□□□ -0.53
UBE3B-201ENST00000340074 ZP3P21754 424 aa11.71□□□□□ -0.53
UBE3B-201ENST00000340074 VAMP1P23763 118 aa11.71□□□□□ -0.53
UBE3B-201ENST00000340074 MFAP2P55001 183 aa11.71□□□□□ -0.53
UBE3B-201ENST00000340074 PPP1R1AQ13522 171 aa11.71□□□□□ -0.53
UBE3B-201ENST00000340074 SLC25A24Q6NUK1 477 aa11.71□□□□□ -0.53
UBE3B-201ENST00000340074 GPR146Q96CH1 333 aa11.71□□□□□ -0.53
UBE3B-201ENST00000340074 PDCD10Q9BUL8 212 aa11.71□□□□□ -0.53
UBE3B-201ENST00000340074 GPR61Q9BZJ8 451 aa11.71□□□□□ -0.53
UBE3B-201ENST00000340074 PLEKHA3Q9HB20 300 aa11.71□□□□□ -0.53
UBE3B-201ENST00000340074 CACNG5Q9UF02 275 aa11.71□□□□□ -0.53
UBE3B-201ENST00000340074 FLVCR2Q9UPI3 526 aa11.71□□□□□ -0.53
UBE3B-201ENST00000340074 MFSD2BA6NFX1 497 aa11.7□□□□□ -0.54
UBE3B-201ENST00000340074 CYB5BO43169 146 aa11.7□□□□□ -0.54
UBE3B-201ENST00000340074 LYRM1O43325 122 aa11.7□□□□□ -0.54
UBE3B-201ENST00000340074 PRB2P02812 416 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-201ENST00000340074 SRPXP78539 464 aa11.7□□□□□ -0.54
UBE3B-201ENST00000340074 C9orf66Q5T8R8 295 aa11.7□□□□□ -0.54
UBE3B-201ENST00000340074 LYZL2Q7Z4W2 148 aa11.7□□□□□ -0.54
UBE3B-201ENST00000340074 LGI3Q8N145 548 aa11.7□□□□□ -0.54
UBE3B-201ENST00000340074 OR2C3Q8N628 320 aa11.7□□□□□ -0.54
UBE3B-201ENST00000340074 CCDC140Q96MF4 163 aa11.7□□□□□ -0.54
UBE3B-201ENST00000340074 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.7□□□□□ -0.54
UBE3B-201ENST00000340074 THYN1Q9P016 225 aa11.7□□□□□ -0.54
UBE3B-201ENST00000340074 A0A0B4J2A0 478 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 PPP5D1E7EU14 171 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 BMPR1BO00238 502 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 ERHP84090 104 aaKnown RBP11.69□□□□□ -0.54
UBE3B-201ENST00000340074 ZNF846Q147U1 533 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 CLEC19AQ6UXS0 136 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 EEF1AKMT3Q96AZ1 226 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 CXorf58Q96LI9 332 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 WDR12Q9GZL7 423 aaKnown RBP11.69□□□□□ -0.54
UBE3B-201ENST00000340074 SHPKQ9UHJ6 478 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 WIPF1O43516 503 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 SFT2D2O95562 160 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 SYNJ2BPP57105 145 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 KRTAP10-11P60412 298 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 UBE2MP61081 183 aaKnown RBP11.69□□□□□ -0.54
UBE3B-201ENST00000340074 EGFEM1PQ0D2K5 195 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 KLF5Q13887 457 aaPredicted RBP11.69□□□□□ -0.54
UBE3B-201ENST00000340074 RPEL1Q2QD12 228 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 ANKRD55Q3KP44 614 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 AARDQ4LEZ3 155 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 NMSQ5H8A3 153 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 FAM209BQ5JX69 171 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 ZNF114Q8NC26 417 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 OR1L6Q8NGR2 347 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 OR1P1Q8NH06 330 aa11.69□□□□□ -0.54
UBE3B-201ENST00000340074 DNAH3Q8TD57 4116 aa11.68□□□□□ -0.54
UBE3B-201ENST00000340074 TRBV7-1A0A0A6YYK4 115 aa11.68□□□□□ -0.54
UBE3B-201ENST00000340074 NXPH3O95157 252 aa11.68□□□□□ -0.54
UBE3B-201ENST00000340074 HLA-AP01891 365 aaKnown RBP11.68□□□□□ -0.54
UBE3B-201ENST00000340074 SULT1A3P0DMM9 295 aa11.68□□□□□ -0.54
UBE3B-201ENST00000340074 SULT1A4P0DMN0 295 aa11.68□□□□□ -0.54
UBE3B-201ENST00000340074 ANXA7P20073 488 aaKnown RBP11.68□□□□□ -0.54
UBE3B-201ENST00000340074 HOXA1P49639 335 aaPredicted RBP11.68□□□□□ -0.54
UBE3B-201ENST00000340074 SPCS3P61009 180 aa11.68□□□□□ -0.54
UBE3B-201ENST00000340074 ACSM6Q6P461 480 aa11.68□□□□□ -0.54
UBE3B-201ENST00000340074 OR52E5Q8NH55 327 aa11.68□□□□□ -0.54
UBE3B-201ENST00000340074 ZNF502Q8TBZ5 544 aa11.68□□□□□ -0.54
UBE3B-201ENST00000340074 VN1R17PQ8TDU5 208 aa11.68□□□□□ -0.54
UBE3B-201ENST00000340074 SORL1Q92673 2214 aa11.67□□□□□ -0.54
UBE3B-201ENST00000340074 IGHV3-21A0A0B4J1V1 117 aa11.67□□□□□ -0.54
UBE3B-201ENST00000340074 PIGBOS1A0A0B4J2F0 54 aa11.67□□□□□ -0.54
UBE3B-201ENST00000340074 C9orf170A2RU37 121 aa11.67□□□□□ -0.54
UBE3B-201ENST00000340074 INS-IGF2F8WCM5 200 aa11.67□□□□□ -0.54
UBE3B-201ENST00000340074 ARL3P36405 182 aa11.67□□□□□ -0.54
UBE3B-201ENST00000340074 LRTM2Q8N967 370 aa11.67□□□□□ -0.54
UBE3B-201ENST00000340074 MISP3Q96FF7 219 aa11.67□□□□□ -0.54
UBE3B-201ENST00000340074 C20orf85Q9H1P6 137 aa11.67□□□□□ -0.54
UBE3B-201ENST00000340074 ENY2Q9NPA8 101 aa11.67□□□□□ -0.54
UBE3B-201ENST00000340074 ZC4H2Q9NQZ6 224 aa11.67□□□□□ -0.54
UBE3B-201ENST00000340074 TBC1D24Q9ULP9 559 aa11.67□□□□□ -0.54
UBE3B-201ENST00000340074 DUXBA0A1W2PPF3 345 aa11.66□□□□□ -0.54
UBE3B-201ENST00000340074 K7EIM0 57 aa11.66□□□□□ -0.54
UBE3B-201ENST00000340074 GGCTO75223 188 aaKnown RBP11.66□□□□□ -0.54
UBE3B-201ENST00000340074 SAP30O75446 220 aa11.66□□□□□ -0.54
UBE3B-201ENST00000340074 UPK1BO75841 260 aa11.66□□□□□ -0.54
UBE3B-201ENST00000340074 CLEC3BP05452 202 aa11.66□□□□□ -0.54
UBE3B-201ENST00000340074 OR4E1P0C645 316 aa11.66□□□□□ -0.54
UBE3B-201ENST00000340074 GPR183P32249 361 aa11.66□□□□□ -0.54
UBE3B-201ENST00000340074 SNCAP37840 140 aa11.66□□□□□ -0.54
UBE3B-201ENST00000340074 INSL3P51460 131 aa11.66□□□□□ -0.54
UBE3B-201ENST00000340074 DHRS2Q13268 280 aa11.66□□□□□ -0.54
UBE3B-201ENST00000340074 SMCO1Q147U7 214 aa11.66□□□□□ -0.54
UBE3B-201ENST00000340074 TATDN3Q17R31 274 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms