RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 PLA2G2CQ5R387 149 aa12.22□□□□□ -0.45
RET-201ENST00000340058 A0A1W2PNU3 283 aaPredicted RBP12.22□□□□□ -0.45
RET-201ENST00000340058 GRIFINA4D1Z8 144 aa12.22□□□□□ -0.45
RET-201ENST00000340058 Q6ZS92 163 aa12.22□□□□□ -0.45
RET-201ENST00000340058 POM121Q96HA1 1249 aa12.22□□□□□ -0.45
RET-201ENST00000340058 SRP19P09132 144 aaKnown RBP12.21□□□□□ -0.45
RET-201ENST00000340058 C8orf88P0DMB2 117 aa12.21□□□□□ -0.45
RET-201ENST00000340058 LEMD1Q68G75 181 aa12.21□□□□□ -0.45
RET-201ENST00000340058 FOXL2NBQ6ZUU3 175 aa12.21□□□□□ -0.45
RET-201ENST00000340058 C5orf17Q8NAS9 161 aa12.21□□□□□ -0.45
RET-201ENST00000340058 C1QTNF9BB2RNN3 333 aa12.21□□□□□ -0.45
RET-201ENST00000340058 IGKV1D-33P01593 117 aa12.21□□□□□ -0.45
RET-201ENST00000340058 IGKV1-33P01594 117 aa12.21□□□□□ -0.45
RET-201ENST00000340058 GCHFRP30047 84 aa12.21□□□□□ -0.45
RET-201ENST00000340058 OR4A5Q8NH83 315 aa12.21□□□□□ -0.45
RET-201ENST00000340058 ANAPC16Q96DE5 110 aa12.21□□□□□ -0.45
RET-201ENST00000340058 SELENOKQ9Y6D0 94 aa12.21□□□□□ -0.45
RET-201ENST00000340058 MUC21A0A0G2JKD1 596 aa12.21□□□□□ -0.46
RET-201ENST00000340058 MUC21A0A140T8X8 626 aa12.21□□□□□ -0.46
RET-201ENST00000340058 LINC00473A8K010 186 aa12.21□□□□□ -0.46
RET-201ENST00000340058 F5H697 171 aa12.21□□□□□ -0.46
RET-201ENST00000340058 MPZP25189 248 aa12.21□□□□□ -0.46
RET-201ENST00000340058 MUC21Q5SSG8 566 aa12.21□□□□□ -0.46
RET-201ENST00000340058 Q6P435 159 aa12.21□□□□□ -0.46
RET-201ENST00000340058 RNF2Q99496 336 aa12.21□□□□□ -0.46
RET-201ENST00000340058 DPRXA6NFQ7 191 aa12.2□□□□□ -0.46
RET-201ENST00000340058 M0QZ24 198 aa12.2□□□□□ -0.46
RET-201ENST00000340058 HLA-DRB5Q30154 266 aa12.2□□□□□ -0.46
RET-201ENST00000340058 DUX4L9Q6RFH8 374 aaPredicted RBP12.2□□□□□ -0.46
RET-201ENST00000340058 NUP210Q8TEM1 1887 aaPredicted RBP12.2□□□□□ -0.46
RET-201ENST00000340058 DNASE2O00115 360 aaPredicted RBP12.2□□□□□ -0.46
RET-201ENST00000340058 MIR17HGQ75NE6 70 aa12.2□□□□□ -0.46
RET-201ENST00000340058 VAMP8Q9BV40 100 aa12.2□□□□□ -0.46
RET-201ENST00000340058 IGKV1D-17A0A075B6S4 117 aa12.2□□□□□ -0.46
RET-201ENST00000340058 SCO2A0A1W2PP80 73 aa12.19□□□□□ -0.46
RET-201ENST00000340058 IL4P05112 153 aa12.19□□□□□ -0.46
RET-201ENST00000340058 PRR31Q5SQ13 230 aa12.19□□□□□ -0.46
RET-201ENST00000340058 COLCA1Q6ZS62 124 aa12.19□□□□□ -0.46
RET-201ENST00000340058 ZNF383Q8NA42 475 aa12.19□□□□□ -0.46
RET-201ENST00000340058 LINC00527Q9UJ94 153 aa12.19□□□□□ -0.46
RET-201ENST00000340058 PAM16Q9Y3D7 125 aa12.19□□□□□ -0.46
RET-201ENST00000340058 IGHG3P01860 377 aa12.19□□□□□ -0.46
RET-201ENST00000340058 AGAP20933 346 aa12.19□□□□□ -0.46
RET-201ENST00000340058 IBA57Q5T440 356 aaKnown RBP12.19□□□□□ -0.46
RET-201ENST00000340058 DTX1Q86Y01 620 aa12.19□□□□□ -0.46
RET-201ENST00000340058 LINC00312Q9Y6C7 94 aa12.19□□□□□ -0.46
RET-201ENST00000340058 LOXL3P58215 753 aa12.18□□□□□ -0.46
RET-201ENST00000340058 Q6ZR03 302 aa12.18□□□□□ -0.46
RET-201ENST00000340058 WDR86Q86TI4 376 aa12.18□□□□□ -0.46
RET-201ENST00000340058 DPM3Q9P2X0 92 aa12.18□□□□□ -0.46
RET-201ENST00000340058 FAM106CPP0CH98 169 aa12.18□□□□□ -0.46
RET-201ENST00000340058 CBLN1P23435 193 aa12.18□□□□□ -0.46
RET-201ENST00000340058 TIMP3P35625 211 aa12.18□□□□□ -0.46
RET-201ENST00000340058 SELENOTP62341 195 aa12.18□□□□□ -0.46
RET-201ENST00000340058 NMSQ5H8A3 153 aa12.18□□□□□ -0.46
RET-201ENST00000340058 DMRTA2Q96SC8 542 aa12.18□□□□□ -0.46
RET-201ENST00000340058 PSMG3Q9BT73 122 aaPredicted RBP12.18□□□□□ -0.46
RET-201ENST00000340058 SMDT1Q9H4I9 107 aa12.18□□□□□ -0.46
RET-201ENST00000340058 YPEL1O60688 119 aa12.18□□□□□ -0.46
RET-201ENST00000340058 SFTPCP11686 197 aa12.18□□□□□ -0.46
RET-201ENST00000340058 GOLT1AQ6ZVE7 132 aa12.18□□□□□ -0.46
RET-201ENST00000340058 LINC00305Q7Z4B0 112 aa12.18□□□□□ -0.46
RET-201ENST00000340058 DPF1Q92782 380 aa12.18□□□□□ -0.46
RET-201ENST00000340058 YPEL2Q96QA6 119 aa12.18□□□□□ -0.46
RET-201ENST00000340058 IFI27L2Q9H2X8 130 aa12.18□□□□□ -0.46
RET-201ENST00000340058 TRGC1P0CF51 173 aa12.18□□□□□ -0.46
RET-201ENST00000340058 MLANAQ16655 118 aa12.18□□□□□ -0.46
RET-201ENST00000340058 ZNF506Q5JVG8 444 aa12.18□□□□□ -0.46
RET-201ENST00000340058 VN1R17PQ8TDU5 208 aa12.18□□□□□ -0.46
RET-201ENST00000340058 OR51M1Q9H341 326 aa12.18□□□□□ -0.46
RET-201ENST00000340058 JMJD1CQ15652 2540 aa12.17□□□□□ -0.46
RET-201ENST00000340058 ADAMTS9Q9P2N4 1935 aa12.17□□□□□ -0.46
RET-201ENST00000340058 LOC389332A0A1B0GUA5 103 aa12.17□□□□□ -0.46
RET-201ENST00000340058 LOC105371267A0A1B0GV96 52 aa12.17□□□□□ -0.46
RET-201ENST00000340058 RNF224P0DH78 156 aa12.17□□□□□ -0.46
RET-201ENST00000340058 G0S2P27469 103 aa12.17□□□□□ -0.46
RET-201ENST00000340058 IQCJQ1A5X6 159 aa12.17□□□□□ -0.46
RET-201ENST00000340058 CENPWQ5EE01 88 aa12.17□□□□□ -0.46
RET-201ENST00000340058 LYPD2Q6UXB3 125 aa12.17□□□□□ -0.46
RET-201ENST00000340058 STXBP6Q8NFX7 210 aa12.17□□□□□ -0.46
RET-201ENST00000340058 IFT22Q9H7X7 185 aa12.17□□□□□ -0.46
RET-201ENST00000340058 FOXA2Q9Y261 457 aaPredicted RBP12.17□□□□□ -0.46
RET-201ENST00000340058 CLDND2Q8NHS1 167 aa12.17□□□□□ -0.46
RET-201ENST00000340058 OSR1Q8TAX0 266 aaPredicted RBP12.17□□□□□ -0.46
RET-201ENST00000340058 IMMP2LQ96T52 175 aa12.17□□□□□ -0.46
RET-201ENST00000340058 TRBV23-1A0A0A0MS06 115 aa12.16□□□□□ -0.46
RET-201ENST00000340058 MBD3L4A6NDZ8 208 aaPredicted RBP12.16□□□□□ -0.46
RET-201ENST00000340058 MBD3L3A6NE82 208 aaPredicted RBP12.16□□□□□ -0.46
RET-201ENST00000340058 MBD3L5A6NJ08 208 aaPredicted RBP12.16□□□□□ -0.46
RET-201ENST00000340058 M0R2Z0 102 aa12.16□□□□□ -0.46
RET-201ENST00000340058 IGKV3-15P01624 115 aa12.16□□□□□ -0.46
RET-201ENST00000340058 OR5AL1P0C617 328 aa12.16□□□□□ -0.46
RET-201ENST00000340058 SSX8Q7RTT4 187 aa12.16□□□□□ -0.46
RET-201ENST00000340058 MBD3L2Q8NHZ7 208 aaPredicted RBP12.16□□□□□ -0.46
RET-201ENST00000340058 FGF16O43320 207 aa12.16□□□□□ -0.46
RET-201ENST00000340058 AMY1AP04745 511 aa12.16□□□□□ -0.46
RET-201ENST00000340058 MARVELD3Q96A59 401 aa12.16□□□□□ -0.46
RET-201ENST00000340058 TMEM50AO95807 157 aa12.16□□□□□ -0.46
RET-201ENST00000340058 ICAM4Q14773 271 aa12.16□□□□□ -0.46
RET-201ENST00000340058 LRTM2Q8N967 370 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms