RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 TRAV39A0A0B4J263 110 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 M0R1X1 148 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 HSPA12AO43301 675 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 MFAP2P55001 183 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 SRSF3P84103 164 aaKnown RBP4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 TMED6Q8WW62 240 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 RCC1LQ96I51 464 aaKnown RBP4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 SLC35D1Q9NTN3 355 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 LSM5Q9Y4Y9 91 aaKnown RBP4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 OR51B2Q9Y5P1 312 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 VPS13CQ709C8 3753 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 ROS1P08922 2347 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 CR1P17927 2039 aa4.27□□□□□ -1.73
PRPF4B-201ENST00000337659 IGLV11-55A0A075B6I3 123 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 TSPAN4O14817 238 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 KCNAB3O43448 404 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 ZNF253O75346 499 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 IGF1P05019 195 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 RNF224P0DH78 156 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 CCL3L1P16619 93 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 ATF4P18848 351 aaPredicted RBP4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 MMD2Q8IY49 270 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 LHX4Q969G2 390 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 ZNF503Q96F45 646 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 FAM167A-AS1Q96KT0 104 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 F11RQ9Y624 299 aaKnown RBP4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 IGKV1OR2-108A0A075B7D4 117 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 C9JCJ5 164 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 TNFSF12O43508 249 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 WT1-ASQ06250 92 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 SLC24A4Q8NFF2 622 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 FOXC2Q99958 501 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 NPVFQ9HCQ7 196 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 SIRT7Q9NRC8 400 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 DOK5Q9P104 306 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 SH3BGRL2Q9UJC5 107 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 KLF12Q9Y4X4 402 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 hCG_1809904A0A1W2PP81 198 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 A0A1W2PPE2 198 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 A0A1W2PR64 198 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 A0A1W2PRV1 198 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 RRHO14718 337 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 APOA2P02652 100 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 PNRC1Q12796 327 aaPredicted RBP4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 TPRX1Q8N7U7 411 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 OR4X1Q8NH49 305 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 TIMD4Q96H15 378 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 RHOVQ96L33 236 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 C7orf69Q9H7B7 122 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 TRAV9-1A0A075B6T8 112 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 LOC105371242A0A075B767 164 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 A0A087X0K7 114 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 FAM90A27PA6NNH2 459 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 NXPH3O95157 252 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 PDLIM4P50479 330 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 RPL8P62917 257 aaKnown RBP4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 CCDC144NLQ6NUI1 221 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 Q6ZRG5 221 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 BATF2Q8N1L9 274 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 DEFB108BQ8NET1 73 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 VN1R17PQ8TDU5 208 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 IL1F10Q8WWZ1 152 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 ZDHHC16Q969W1 377 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 SLC35B3Q9H1N7 401 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 MRPL27Q9P0M9 148 aaKnown RBP4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 U3KQE9 123 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 DCHS2Q6V1P9 2916 aa4.26□□□□□ -1.73
PRPF4B-201ENST00000337659 A0A1W2PRD5 423 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 A0A1W2PRF3 423 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 A0A1W2PRM7 423 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 C17orf112F2Z3M2 114 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 FCGR3BO75015 233 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 OR2C1O95371 312 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 BCL2P10415 239 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 CD81P60033 236 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 S100A10P60903 97 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 YPEL3P61236 119 aaPredicted RBP4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 ERVK-16P61578 105 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 RAB11AP62491 216 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 PEA15Q15121 130 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 TGIF2LXQ8IUE1 241 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 FLYWCH2Q96CP2 140 aaKnown RBP4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 ZNF430Q9H8G1 570 aaPredicted RBP4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 RPRMQ9NS64 109 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 GNG12Q9UBI6 72 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 ALPK2Q86TB3 2170 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 RBFOX3A6NFN3 312 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 E7EUB6 86 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 FOXH1O75593 365 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 TYMSP04818 313 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 SRSF2Q01130 221 aaKnown RBP4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 FAM74A1Q5RGS3 127 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 BTNL3Q6UXE8 466 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 ZNF562Q6V9R5 426 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 OR10P1Q8NGE3 313 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 OR10X1Q8NGY0 326 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 NARFLQ9H6Q4 476 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 DYNLRB1Q9NP97 96 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 DPM3Q9P2X0 92 aa4.25□□□□□ -1.73
PRPF4B-201ENST00000337659 ANK2Q01484 3957 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms