RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 SP9P0CG40 484 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 SFTA2Q6UW10 78 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 LEAP2Q969E1 77 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 GDF15Q99988 308 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 NRN1Q9NPD7 142 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 KNL1Q8NG31 2342 aa11.04□□□□□ -0.64
HLCS-201ENST00000336648 TRAV2A0A0B4J234 112 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 M0R381 172 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 FAM57AQ8TBR7 257 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 GTF3AQ92664 365 aaKnown RBP11.03□□□□□ -0.64
HLCS-201ENST00000336648 TRAV5A0A0B4J249 113 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 EFEMP2O95967 443 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 PEAR1Q5VY43 1037 aaPredicted RBP11.03□□□□□ -0.64
HLCS-201ENST00000336648 PPBPP02775 128 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 ZNF688P0C7X2 276 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 TMEM144Q7Z5S9 345 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 FBLN5Q9UBX5 448 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 A0A1W2PR77 199 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 PRR19A6NJB7 356 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 H3BTX0 84 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 CGAP01215 116 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 RPL39P5Q59GN2 51 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 DUX3Q96PT4 197 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 CDK5RAP2Q96SN8 1893 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 FAM90A9PA6NNJ1 464 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 VWC2LB2RUY7 222 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 M0R2P5 195 aa11.03□□□□□ -0.64
HLCS-201ENST00000336648 DUSP14O95147 198 aaKnown RBP11.03□□□□□ -0.64
HLCS-201ENST00000336648 C1QCP02747 245 aa11.02□□□□□ -0.64
HLCS-201ENST00000336648 CRYBA2P53672 197 aa11.02□□□□□ -0.64
HLCS-201ENST00000336648 FAM19A2Q8N3H0 131 aa11.02□□□□□ -0.64
HLCS-201ENST00000336648 RSPO3Q9BXY4 272 aaPredicted RBP11.02□□□□□ -0.64
HLCS-201ENST00000336648 LAMB2P55268 1798 aa11.02□□□□□ -0.64
HLCS-201ENST00000336648 NAPSAO96009 420 aa11.02□□□□□ -0.65
HLCS-201ENST00000336648 CRPP02741 224 aa11.02□□□□□ -0.65
HLCS-201ENST00000336648 ESDP10768 282 aa11.02□□□□□ -0.65
HLCS-201ENST00000336648 OCIAD2Q56VL3 154 aa11.02□□□□□ -0.65
HLCS-201ENST00000336648 ZIC4Q8N9L1 334 aa11.02□□□□□ -0.65
HLCS-201ENST00000336648 ERG28Q9UKR5 140 aa11.02□□□□□ -0.65
HLCS-201ENST00000336648 A8MXK9 166 aa11.02□□□□□ -0.65
HLCS-201ENST00000336648 IQCF6A8MYZ5 107 aa11.02□□□□□ -0.65
HLCS-201ENST00000336648 TOMM40O96008 361 aa11.02□□□□□ -0.65
HLCS-201ENST00000336648 LINC00271P0C7V0 271 aa11.02□□□□□ -0.65
HLCS-201ENST00000336648 IGFBP2P18065 325 aa11.02□□□□□ -0.65
HLCS-201ENST00000336648 WFDC6Q9BQY6 131 aa11.02□□□□□ -0.65
HLCS-201ENST00000336648 C4orf51C9J302 202 aa11.02□□□□□ -0.65
HLCS-201ENST00000336648 PRTN3P24158 256 aa11.02□□□□□ -0.65
HLCS-201ENST00000336648 CSRP3P50461 194 aa11.02□□□□□ -0.65
HLCS-201ENST00000336648 MAP1BP46821 2468 aaKnown RBP11.02□□□□□ -0.65
HLCS-201ENST00000336648 OR10J3Q5JRS4 329 aa11.01□□□□□ -0.65
HLCS-201ENST00000336648 COL18A1P39060 1754 aa11.01□□□□□ -0.65
HLCS-201ENST00000336648 MRAPQ8TCY5 172 aa11.01□□□□□ -0.65
HLCS-201ENST00000336648 FOXA2Q9Y261 457 aaPredicted RBP11.01□□□□□ -0.65
HLCS-201ENST00000336648 CHCHD2Q9Y6H1 151 aaPredicted RBP11.01□□□□□ -0.65
HLCS-201ENST00000336648 FABP5P3A8MUU1 101 aa11.01□□□□□ -0.65
HLCS-201ENST00000336648 IFI27P40305 119 aaPredicted RBP11.01□□□□□ -0.65
HLCS-201ENST00000336648 TGIF1Q15583 401 aa11.01□□□□□ -0.65
HLCS-201ENST00000336648 TMEM170AQ8WVE7 144 aa11.01□□□□□ -0.65
HLCS-201ENST00000336648 REPIN1Q9BWE0 567 aaKnown RBP11.01□□□□□ -0.65
HLCS-201ENST00000336648 TDGF1P3P51864 188 aa11.01□□□□□ -0.65
HLCS-201ENST00000336648 CCL20P78556 96 aa11.01□□□□□ -0.65
HLCS-201ENST00000336648 ZNRF1Q8ND25 227 aa11.01□□□□□ -0.65
HLCS-201ENST00000336648 FBXL15Q9H469 300 aa11.01□□□□□ -0.65
HLCS-201ENST00000336648 TRAV8-1A0A0A6YYK1 113 aa11.01□□□□□ -0.65
HLCS-201ENST00000336648 CECR9P0C854 216 aa11.01□□□□□ -0.65
HLCS-201ENST00000336648 ZNF525Q8N782 197 aa11.01□□□□□ -0.65
HLCS-201ENST00000336648 GPHA2Q96T91 129 aa11.01□□□□□ -0.65
HLCS-201ENST00000336648 RGPD4Q7Z3J3 1758 aa11.01□□□□□ -0.65
HLCS-201ENST00000336648 NINQ8N4C6 2090 aa11□□□□□ -0.65
HLCS-201ENST00000336648 HAX1O00165 279 aa11□□□□□ -0.65
HLCS-201ENST00000336648 ZIC3O60481 467 aa11□□□□□ -0.65
HLCS-201ENST00000336648 SERF1AO75920 110 aa11□□□□□ -0.65
HLCS-201ENST00000336648 FOXL2P58012 376 aa11□□□□□ -0.65
HLCS-201ENST00000336648 VKORC1Q9BQB6 163 aa11□□□□□ -0.65
HLCS-201ENST00000336648 Q9H3A6 140 aa11□□□□□ -0.65
HLCS-201ENST00000336648 YPEL1O60688 119 aa11□□□□□ -0.65
HLCS-201ENST00000336648 ERVK11-1P61568 191 aa11□□□□□ -0.65
HLCS-201ENST00000336648 FAM166AQ6J272 317 aa11□□□□□ -0.65
HLCS-201ENST00000336648 MRPL52Q86TS9 123 aaKnown RBP11□□□□□ -0.65
HLCS-201ENST00000336648 YPEL2Q96QA6 119 aa11□□□□□ -0.65
HLCS-201ENST00000336648 EPDR1Q9UM22 224 aa11□□□□□ -0.65
HLCS-201ENST00000336648 IGKV1D-33P01593 117 aa11□□□□□ -0.65
HLCS-201ENST00000336648 IGKV1-33P01594 117 aa11□□□□□ -0.65
HLCS-201ENST00000336648 OSTCQ9NRP0 149 aa11□□□□□ -0.65
HLCS-201ENST00000336648 CHTOPQ9Y3Y2 248 aaKnown RBP11□□□□□ -0.65
HLCS-201ENST00000336648 IGKCP01834 107 aa11□□□□□ -0.65
HLCS-201ENST00000336648 HBDP02042 147 aa11□□□□□ -0.65
HLCS-201ENST00000336648 SCO2A0A1W2PP80 73 aa11□□□□□ -0.65
HLCS-201ENST00000336648 TMEM86BQ8N661 226 aa11□□□□□ -0.65
HLCS-201ENST00000336648 RTBDNQ9BSG5 229 aaPredicted RBP11□□□□□ -0.65
HLCS-201ENST00000336648 C17orf98A8MV24 154 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 UPK2O00526 184 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 ST20Q9HBF5 79 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.99□□□□□ -0.65
HLCS-201ENST00000336648 IGHV2OR16-5A0A0B4J2B6 119 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 A0A1W2PRE2 83 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 ORMDL2Q53FV1 153 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 TRBV6-7A0A0A0MS04 114 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 JMJD8Q96S16 334 aa10.99□□□□□ -0.65
HLCS-201ENST00000336648 PCM1Q15154 2024 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms