RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 GAPTQ8N292 157 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 ZNRF2Q8NHG8 242 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 RNF125Q96EQ8 232 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 FBXL15Q9H469 300 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 C19orf25Q9UFG5 118 aaPredicted RBP7.13□□□□□ -1.27
TDP1-201ENST00000335725 KIF26BQ2KJY2 2108 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 TNFSF11O14788 317 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 OR2H2O95918 312 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 COL8A1P27658 744 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 CD38P28907 300 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 ARL16Q0P5N6 197 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 EDDM3AQ14507 147 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 TBC1D28Q2M2D7 210 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 LYRM7Q5U5X0 104 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 PHLDA1Q8WV24 401 aaPredicted RBP7.13□□□□□ -1.27
TDP1-201ENST00000335725 RASL10AQ92737 203 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 C11orf52Q96A22 123 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 S1PR5Q9H228 398 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 IFI27L2Q9H2X8 130 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 NHP2Q9NX24 153 aaKnown RBP7.13□□□□□ -1.27
TDP1-201ENST00000335725 DNAJB12Q9NXW2 375 aaKnown RBP7.13□□□□□ -1.27
TDP1-201ENST00000335725 PDCD6O75340 191 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 MPV17P39210 176 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 RPS16P62249 146 aaKnown RBP7.13□□□□□ -1.27
TDP1-201ENST00000335725 MRPL23Q16540 153 aaKnown RBP7.13□□□□□ -1.27
TDP1-201ENST00000335725 UTF1Q5T230 341 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 ZNF793Q6ZN11 406 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 ASCL5Q7RTU5 278 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 ZNF808Q8N4W9 903 aaPredicted RBP7.13□□□□□ -1.27
TDP1-201ENST00000335725 NUP35Q8NFH5 326 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 IL1F10Q8WWZ1 152 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 SPACA5Q96QH8 159 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 KIR2DL4Q99706 377 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 TAC3Q9UHF0 121 aa7.13□□□□□ -1.27
TDP1-201ENST00000335725 PRR19A6NJB7 356 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 PPYP01298 95 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 VWC2Q2TAL6 325 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 C6orf201Q7Z4U5 140 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 PPP1R32Q7Z5V6 425 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 TM4SF19Q96DZ7 209 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 DLL3Q9NYJ7 618 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 FAM90A18PA6NE21 464 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 FAM90A16PA6NEW6 464 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 FAM90A8PA6NJQ4 464 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 FAM90A9PA6NNJ1 464 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 RPL18Q07020 188 aaKnown RBP7.12□□□□□ -1.27
TDP1-201ENST00000335725 FHL3Q13643 280 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 SPANXN5Q5MJ07 72 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 CFAP126Q5VTH2 177 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 ATP5L2Q7Z4Y8 100 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 OR5AS1Q8N127 324 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 CFHR4Q92496 578 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 DLX4Q92988 240 aaPredicted RBP7.12□□□□□ -1.27
TDP1-201ENST00000335725 LINC00479Q96M42 142 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 LINC01587Q99440 93 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 MCRIP2Q9BUT9 160 aaKnown RBP7.12□□□□□ -1.27
TDP1-201ENST00000335725 LTBP3Q9NS15 1303 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 TRIP12Q14669 1992 aaPredicted RBP7.12□□□□□ -1.27
TDP1-201ENST00000335725 C8orf88P0DMB2 117 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 IAPPP10997 89 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 MFAP2P55001 183 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 LINC00173Q6ZV60 143 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 SMRP1Q8NCR6 262 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 PBOV1Q9GZY1 135 aa7.12□□□□□ -1.27
TDP1-201ENST00000335725 LOC107984640A0A0U1RRK4 108 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 RBP4P02753 201 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 CD27P26842 260 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 FXYD2P54710 66 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 DLX6P56179 175 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 TNFAIP6P98066 277 aaPredicted RBP7.11□□□□□ -1.27
TDP1-201ENST00000335725 C17orf99Q6UX52 265 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 OR4C13Q8NGP0 309 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 PIGCQ92535 297 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.11□□□□□ -1.27
TDP1-201ENST00000335725 C2CD4DB7Z1M9 353 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 K7EQS6 105 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 DHRS3O75911 302 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 FOXE3Q13461 319 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 RRN3P1Q2M238 152 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 TMEM211Q6ICI0 200 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 Q6ZNB5 142 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 BCORP1Q8N888 145 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 C17orf51A8MQB3 221 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.11□□□□□ -1.27
TDP1-201ENST00000335725 AMTNQ6UX39 209 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 PQLC2Q6ZP29 291 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 HSD11B1LQ7Z5J1 315 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 NFE4Q86UQ8 179 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 LILRA3Q8N6C8 439 aaPredicted RBP7.11□□□□□ -1.27
TDP1-201ENST00000335725 NAT6Q93015 286 aa7.11□□□□□ -1.27
TDP1-201ENST00000335725 KMT2EQ8IZD2 1858 aa7.1□□□□□ -1.27
TDP1-201ENST00000335725 NKX2-2O95096 273 aa7.1□□□□□ -1.27
TDP1-201ENST00000335725 TAL2Q16559 108 aa7.1□□□□□ -1.27
TDP1-201ENST00000335725 FLYWCH2Q96CP2 140 aaKnown RBP7.1□□□□□ -1.27
TDP1-201ENST00000335725 SH2D7A6NKC9 451 aaPredicted RBP7.1□□□□□ -1.27
TDP1-201ENST00000335725 RS1O15537 224 aa7.1□□□□□ -1.27
TDP1-201ENST00000335725 CYBAP13498 195 aa7.1□□□□□ -1.27
TDP1-201ENST00000335725 EMDP50402 254 aa7.1□□□□□ -1.27
TDP1-201ENST00000335725 CEND1Q8N111 149 aa7.1□□□□□ -1.27
TDP1-201ENST00000335725 OR1L4Q8NGR5 311 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms